RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ODAMA1E959 279 aa11.55□□□□□ -0.56
SCARB2-227ENST00000640957 K7EN84 100 aa11.55□□□□□ -0.56
SCARB2-227ENST00000640957 CD24P25063 80 aa11.55□□□□□ -0.56
SCARB2-227ENST00000640957 EPHA8P29322 1005 aaPredicted RBP11.55□□□□□ -0.56
SCARB2-227ENST00000640957 LDLRAD2Q5SZI1 272 aa11.55□□□□□ -0.56
SCARB2-227ENST00000640957 MRPL21Q7Z2W9 205 aaKnown RBP11.55□□□□□ -0.56
SCARB2-227ENST00000640957 DRAM1Q8N682 238 aa11.55□□□□□ -0.56
SCARB2-227ENST00000640957 SSBP3Q9BWW4 388 aaPredicted RBP11.55□□□□□ -0.56
SCARB2-227ENST00000640957 TMEM38BQ9NVV0 291 aa11.55□□□□□ -0.56
SCARB2-227ENST00000640957 ZNF586Q9NXT0 402 aa11.55□□□□□ -0.56
SCARB2-227ENST00000640957 LOC105371242A0A075B767 164 aa11.55□□□□□ -0.56
SCARB2-227ENST00000640957 TYMSP04818 313 aa11.55□□□□□ -0.56
SCARB2-227ENST00000640957 SRIP30626 198 aa11.55□□□□□ -0.56
SCARB2-227ENST00000640957 TMEM144Q7Z5S9 345 aa11.55□□□□□ -0.56
SCARB2-227ENST00000640957 TMEM54Q969K7 222 aa11.55□□□□□ -0.56
SCARB2-227ENST00000640957 GCM1Q9NP62 436 aa11.55□□□□□ -0.56
SCARB2-227ENST00000640957 SUMO3P55854 103 aaPredicted RBP11.54□□□□□ -0.56
SCARB2-227ENST00000640957 OIT3Q8WWZ8 545 aa11.54□□□□□ -0.56
SCARB2-227ENST00000640957 FAM122AQ96E09 287 aa11.54□□□□□ -0.56
SCARB2-227ENST00000640957 ABHD14BQ96IU4 210 aa11.54□□□□□ -0.56
SCARB2-227ENST00000640957 DUSP23Q9BVJ7 150 aa11.54□□□□□ -0.56
SCARB2-227ENST00000640957 OR2D2Q9H210 308 aa11.54□□□□□ -0.56
SCARB2-227ENST00000640957 CHCHD2Q9Y6H1 151 aaPredicted RBP11.54□□□□□ -0.56
SCARB2-227ENST00000640957 C3orf79P0CE67 100 aa11.54□□□□□ -0.56
SCARB2-227ENST00000640957 C10orf128Q5T292 105 aa11.54□□□□□ -0.56
SCARB2-227ENST00000640957 LINC00696Q6ZRV3 163 aa11.54□□□□□ -0.56
SCARB2-227ENST00000640957 CENPVQ7Z7K6 275 aaPredicted RBP11.54□□□□□ -0.56
SCARB2-227ENST00000640957 AGBL5Q8NDL9 886 aa11.54□□□□□ -0.56
SCARB2-227ENST00000640957 C17orf98A8MV24 154 aa11.54□□□□□ -0.56
SCARB2-227ENST00000640957 DEGS1O15121 323 aa11.54□□□□□ -0.56
SCARB2-227ENST00000640957 SNAI2O43623 268 aa11.54□□□□□ -0.56
SCARB2-227ENST00000640957 MGST1P10620 155 aaKnown RBP11.54□□□□□ -0.56
SCARB2-227ENST00000640957 GPR6P46095 362 aaPredicted RBP11.54□□□□□ -0.56
SCARB2-227ENST00000640957 RPL31P62899 125 aaKnown RBP11.54□□□□□ -0.56
SCARB2-227ENST00000640957 OR52L2PQ8NGH6 319 aa11.54□□□□□ -0.56
SCARB2-227ENST00000640957 HIPK2Q9H2X6 1198 aa11.54□□□□□ -0.56
SCARB2-227ENST00000640957 CADP27708 2225 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 OR6C6A6NF89 314 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 FAM166BA8MTA8 275 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 GPX1P07203 203 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 RFPL3SP0C7P2 107 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 IGLC2P0DOY2 106 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 IGLC3P0DOY3 106 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 FOLR3P41439 243 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 LCN2P80188 198 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 OR8B8Q15620 311 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 ASCL4Q6XD76 172 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 QTRT1Q9BXR0 403 aaKnown RBP11.53□□□□□ -0.56
SCARB2-227ENST00000640957 DLL3Q9NYJ7 618 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 CLCF1Q9UBD9 225 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 YTHDF2Q9Y5A9 579 aaKnown RBP11.53□□□□□ -0.56
SCARB2-227ENST00000640957 SPENQ96T58 3664 aaKnown RBP11.53□□□□□ -0.56
SCARB2-227ENST00000640957 ZNF503-AS2A6NEH8 195 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 NKX6-3A6NJ46 265 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 SH2D7A6NKC9 451 aaPredicted RBP11.53□□□□□ -0.56
SCARB2-227ENST00000640957 MLNRO43193 412 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 ZNF83P51522 516 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 FGF12P61328 243 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 SAPCD1Q5SSQ6 148 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 SGK494Q96LW2 274 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 HINT2Q9BX68 163 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 GP6Q9HCN6 339 aa11.53□□□□□ -0.56
SCARB2-227ENST00000640957 ATP6V1FQ16864 119 aa11.52□□□□□ -0.56
SCARB2-227ENST00000640957 TMEM42Q69YG0 159 aa11.52□□□□□ -0.56
SCARB2-227ENST00000640957 SPINK14Q6IE38 97 aa11.52□□□□□ -0.56
SCARB2-227ENST00000640957 MMD2Q8IY49 270 aa11.52□□□□□ -0.56
SCARB2-227ENST00000640957 C1orf174Q8IYL3 243 aa11.52□□□□□ -0.56
SCARB2-227ENST00000640957 STPG3Q8N7X2 389 aa11.52□□□□□ -0.56
SCARB2-227ENST00000640957 ZNF596Q8TC21 504 aa11.52□□□□□ -0.56
SCARB2-227ENST00000640957 IL36GQ9NZH8 169 aa11.52□□□□□ -0.56
SCARB2-227ENST00000640957 DPRXA6NFQ7 191 aa11.52□□□□□ -0.57
SCARB2-227ENST00000640957 LAMTOR5O43504 91 aa11.52□□□□□ -0.57
SCARB2-227ENST00000640957 TMEM147Q9BVK8 224 aa11.52□□□□□ -0.57
SCARB2-227ENST00000640957 RIPPLY3P57055 190 aa11.52□□□□□ -0.57
SCARB2-227ENST00000640957 SELENOTP62341 195 aa11.52□□□□□ -0.57
SCARB2-227ENST00000640957 Q8N976 141 aa11.52□□□□□ -0.57
SCARB2-227ENST00000640957 UQCR10Q9UDW1 63 aa11.52□□□□□ -0.57
SCARB2-227ENST00000640957 A0A1W2PN81 502 aa11.51□□□□□ -0.57
SCARB2-227ENST00000640957 A0A1W2PS18 150 aa11.51□□□□□ -0.57
SCARB2-227ENST00000640957 NXPH2O95156 264 aa11.51□□□□□ -0.57
SCARB2-227ENST00000640957 PSG1P11464 419 aa11.51□□□□□ -0.57
SCARB2-227ENST00000640957 RANP62826 216 aaKnown RBP11.51□□□□□ -0.57
SCARB2-227ENST00000640957 C3AR1Q16581 482 aa11.51□□□□□ -0.57
SCARB2-227ENST00000640957 ABHD12Q8N2K0 398 aa11.51□□□□□ -0.57
SCARB2-227ENST00000640957 PMCHL2Q9BQD1 86 aa11.51□□□□□ -0.57
SCARB2-227ENST00000640957 NAA38Q9BRA0 125 aaKnown RBP11.51□□□□□ -0.57
SCARB2-227ENST00000640957 TNRC18O15417 2968 aaPredicted RBP11.51□□□□□ -0.57
SCARB2-227ENST00000640957 UBE2NP61088 152 aaKnown RBP11.51□□□□□ -0.57
SCARB2-227ENST00000640957 PAFAH1B2P68402 229 aa11.51□□□□□ -0.57
SCARB2-227ENST00000640957 PDLIM3Q53GG5 364 aaPredicted RBP11.51□□□□□ -0.57
SCARB2-227ENST00000640957 TMEM14EPQ6UXP3 125 aa11.51□□□□□ -0.57
SCARB2-227ENST00000640957 KIR3DL3Q8N743 410 aa11.51□□□□□ -0.57
SCARB2-227ENST00000640957 C10orf35Q96D05 121 aa11.51□□□□□ -0.57
SCARB2-227ENST00000640957 SSBP4Q9BWG4 385 aaPredicted RBP11.51□□□□□ -0.57
SCARB2-227ENST00000640957 SEPSECSQ9HD40 501 aaKnown RBP11.51□□□□□ -0.57
SCARB2-227ENST00000640957 MED13Q9UHV7 2174 aa11.51□□□□□ -0.57
SCARB2-227ENST00000640957 OR10J4P0C629 311 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 GATA2P23769 480 aaPredicted RBP11.5□□□□□ -0.57
SCARB2-227ENST00000640957 FBLN7Q53RD9 439 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 FAM58AQ8N1B3 248 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms