RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 TMEM268Q5VZI3 342 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 LYZL2Q7Z4W2 148 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 THNSL2Q86YJ6 484 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 TAF15Q92804 592 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCNA1-203ENST00000625767 CHIAQ9BZP6 476 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 SLC25A17O43808 307 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 DUS4LO95620 317 aaKnown RBP13.24□□□□□ -0.29
CCNA1-203ENST00000625767 SAA1P0DJI8 122 aaPredicted RBP13.24□□□□□ -0.29
CCNA1-203ENST00000625767 RRASP10301 218 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 MMDQ15546 238 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 AANATQ16613 207 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 C2orf68Q2NKX9 166 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 SLC35G3Q8N808 338 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 CD300LFQ8TDQ1 290 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 ZNF431Q8TF32 576 aaPredicted RBP13.24□□□□□ -0.29
CCNA1-203ENST00000625767 SSMEM1Q8WWF3 244 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 R3HDM4Q96D70 268 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 SEC22AQ96IW7 307 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 TMEM56Q96MV1 263 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 PLEKHA2Q9HB19 425 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 TMEM56-RWDD3S4R434 201 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 TRAV3A0A0B4J244 114 aa13.23□□□□□ -0.29
CCNA1-203ENST00000625767 MARCH11A6NNE9 402 aa13.23□□□□□ -0.29
CCNA1-203ENST00000625767 ADAP1O75689 374 aa13.23□□□□□ -0.29
CCNA1-203ENST00000625767 DHFRP00374 187 aa13.23□□□□□ -0.29
CCNA1-203ENST00000625767 PSG5Q15238 335 aa13.23□□□□□ -0.29
CCNA1-203ENST00000625767 DHRS7BQ6IAN0 325 aaPredicted RBP13.23□□□□□ -0.29
CCNA1-203ENST00000625767 UXS1Q8NBZ7 420 aa13.23□□□□□ -0.29
CCNA1-203ENST00000625767 OSR1Q8TAX0 266 aaPredicted RBP13.23□□□□□ -0.29
CCNA1-203ENST00000625767 MITD1Q8WV92 249 aa13.23□□□□□ -0.29
CCNA1-203ENST00000625767 RHOVQ96L33 236 aa13.23□□□□□ -0.29
CCNA1-203ENST00000625767 SLC25A33Q9BSK2 321 aa13.23□□□□□ -0.29
CCNA1-203ENST00000625767 FBXL15Q9H469 300 aa13.23□□□□□ -0.29
CCNA1-203ENST00000625767 NCBP2LA6PVI3 153 aaKnown RBP13.22□□□□□ -0.29
CCNA1-203ENST00000625767 MPTX1A8MV57 137 aa13.22□□□□□ -0.29
CCNA1-203ENST00000625767 AMY1AP04745 511 aa13.22□□□□□ -0.29
CCNA1-203ENST00000625767 ANXA3P12429 323 aa13.22□□□□□ -0.29
CCNA1-203ENST00000625767 PJVKQ0ZLH3 352 aa13.22□□□□□ -0.29
CCNA1-203ENST00000625767 MRGPRG-AS1Q2M3A8 158 aa13.22□□□□□ -0.29
CCNA1-203ENST00000625767 ZNF695Q8IW36 515 aa13.22□□□□□ -0.29
CCNA1-203ENST00000625767 TCTEX1D1Q8N7M0 179 aa13.22□□□□□ -0.29
CCNA1-203ENST00000625767 MINDY2Q8NBR6 621 aa13.22□□□□□ -0.29
CCNA1-203ENST00000625767 RBPMSQ93062 196 aaKnown RBP13.22□□□□□ -0.29
CCNA1-203ENST00000625767 RBM14Q96PK6 669 aaKnown RBP13.22□□□□□ -0.29
CCNA1-203ENST00000625767 VPREB3Q9UKI3 123 aa13.22□□□□□ -0.29
CCNA1-203ENST00000625767 A0A1B0GVG6 124 aa13.21□□□□□ -0.29
CCNA1-203ENST00000625767 C7orf66A4D0T2 115 aa13.21□□□□□ -0.29
CCNA1-203ENST00000625767 CCSO14618 274 aa13.21□□□□□ -0.29
CCNA1-203ENST00000625767 HOXB5P09067 269 aa13.21□□□□□ -0.29
CCNA1-203ENST00000625767 MYOD1P15172 320 aa13.21□□□□□ -0.29
CCNA1-203ENST00000625767 NQO2P16083 231 aa13.21□□□□□ -0.29
CCNA1-203ENST00000625767 OR4A47Q6IF82 309 aa13.21□□□□□ -0.29
CCNA1-203ENST00000625767 RBMS3Q6XE24 437 aaKnown RBP13.21□□□□□ -0.29
CCNA1-203ENST00000625767 Q8N9W7 124 aa13.21□□□□□ -0.29
CCNA1-203ENST00000625767 DMBX1Q8NFW5 382 aa13.21□□□□□ -0.29
CCNA1-203ENST00000625767 CLCC1Q96S66 551 aa13.21□□□□□ -0.29
CCNA1-203ENST00000625767 FAM212BQ9NTI7 297 aaPredicted RBP13.21□□□□□ -0.29
CCNA1-203ENST00000625767 COMMD9Q9P000 198 aa13.21□□□□□ -0.29
CCNA1-203ENST00000625767 NSG2Q9Y328 171 aa13.21□□□□□ -0.29
CCNA1-203ENST00000625767 FCN1O00602 326 aa13.21□□□□□ -0.3
CCNA1-203ENST00000625767 NBR2O15453 112 aa13.21□□□□□ -0.3
CCNA1-203ENST00000625767 CREBL2O60519 120 aaPredicted RBP13.21□□□□□ -0.3
CCNA1-203ENST00000625767 PRAF2O60831 178 aa13.21□□□□□ -0.3
CCNA1-203ENST00000625767 NDUFA3O95167 84 aa13.21□□□□□ -0.3
CCNA1-203ENST00000625767 CRYGBP07316 175 aa13.21□□□□□ -0.3
CCNA1-203ENST00000625767 OR9G9P0C7N8 305 aa13.21□□□□□ -0.3
CCNA1-203ENST00000625767 Q6ZRM9 215 aa13.21□□□□□ -0.3
CCNA1-203ENST00000625767 Q6ZS46 218 aa13.21□□□□□ -0.3
CCNA1-203ENST00000625767 LGI3Q8N145 548 aa13.21□□□□□ -0.3
CCNA1-203ENST00000625767 C12orf45Q8N5I9 185 aaPredicted RBP13.21□□□□□ -0.3
CCNA1-203ENST00000625767 FAM71E2Q8N5Q1 922 aa13.21□□□□□ -0.3
CCNA1-203ENST00000625767 NPBQ8NG41 125 aa13.21□□□□□ -0.3
CCNA1-203ENST00000625767 TMEM140Q9NV12 185 aa13.21□□□□□ -0.3
CCNA1-203ENST00000625767 METTL1Q9UBP6 276 aaKnown RBP13.21□□□□□ -0.3
CCNA1-203ENST00000625767 DBX1A6NMT0 343 aa13.2□□□□□ -0.3
CCNA1-203ENST00000625767 RRHO14718 337 aa13.2□□□□□ -0.3
CCNA1-203ENST00000625767 B3GALNT1O75752 331 aa13.2□□□□□ -0.3
CCNA1-203ENST00000625767 OR2F2O95006 317 aa13.2□□□□□ -0.3
CCNA1-203ENST00000625767 P0C879 139 aa13.2□□□□□ -0.3
CCNA1-203ENST00000625767 AKR1C2P52895 323 aa13.2□□□□□ -0.3
CCNA1-203ENST00000625767 Q6ZNX1 250 aa13.2□□□□□ -0.3
CCNA1-203ENST00000625767 FAM219AQ8IW50 185 aa13.2□□□□□ -0.3
CCNA1-203ENST00000625767 PUSL1Q8N0Z8 303 aaKnown RBP13.2□□□□□ -0.3
CCNA1-203ENST00000625767 C5orf56Q8N8D9 126 aa13.2□□□□□ -0.3
CCNA1-203ENST00000625767 LRTM2Q8N967 370 aa13.2□□□□□ -0.3
CCNA1-203ENST00000625767 OR5R1Q8NH85 324 aa13.2□□□□□ -0.3
CCNA1-203ENST00000625767 PHB2Q99623 299 aa13.2□□□□□ -0.3
CCNA1-203ENST00000625767 BTBD17A6NE02 478 aa13.19□□□□□ -0.3
CCNA1-203ENST00000625767 HRASP01112 189 aa13.19□□□□□ -0.3
CCNA1-203ENST00000625767 LGALS7P47929 136 aa13.19□□□□□ -0.3
CCNA1-203ENST00000625767 HILS1P60008 231 aa13.19□□□□□ -0.3
CCNA1-203ENST00000625767 UBE2KP61086 200 aa13.19□□□□□ -0.3
CCNA1-203ENST00000625767 SCGB2A2Q13296 93 aa13.19□□□□□ -0.3
CCNA1-203ENST00000625767 POU2AF1Q16633 256 aa13.19□□□□□ -0.3
CCNA1-203ENST00000625767 C11orf88Q6PI97 169 aa13.19□□□□□ -0.3
CCNA1-203ENST00000625767 COQ8AQ8NI60 647 aa13.19□□□□□ -0.3
CCNA1-203ENST00000625767 ZNF418Q8TF45 676 aaPredicted RBP13.19□□□□□ -0.3
CCNA1-203ENST00000625767 GPR146Q96CH1 333 aa13.19□□□□□ -0.3
CCNA1-203ENST00000625767 TSNAXQ99598 290 aaKnown RBP13.19□□□□□ -0.3
CCNA1-203ENST00000625767 OR51J1Q9H342 316 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 548.4 ms