RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 METTL1Q9UBP6 276 aaKnown RBP10.8□□□□□ -0.68
NEK3-210ENST00000620675 LINC00527Q9UJ94 153 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 ANK2Q01484 3957 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 TRAV3A0A0B4J244 114 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 TEX13DA0A0J9YY54 714 aaPredicted RBP10.8□□□□□ -0.68
NEK3-210ENST00000620675 RRASP10301 218 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 RAB25P57735 213 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 IZUMO4Q1ZYL8 232 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 HIST2H2BDQ6DRA6 164 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 C20orf85Q9H1P6 137 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 LIN7CQ9NUP9 197 aaKnown RBP10.8□□□□□ -0.68
NEK3-210ENST00000620675 NUDT15Q9NV35 164 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 FAM240BA0A1B0GVZ2 78 aa10.79□□□□□ -0.68
NEK3-210ENST00000620675 RNF212BA8MTL3 300 aa10.79□□□□□ -0.68
NEK3-210ENST00000620675 H0Y980 276 aa10.79□□□□□ -0.68
NEK3-210ENST00000620675 RBFOX2O43251 390 aaKnown RBP eCLIP10.79□□□□□ -0.68
NEK3-210ENST00000620675 FGF16O43320 207 aa10.79□□□□□ -0.68
NEK3-210ENST00000620675 MYOD1P15172 320 aa10.79□□□□□ -0.68
NEK3-210ENST00000620675 MDKP21741 143 aaPredicted RBP10.79□□□□□ -0.68
NEK3-210ENST00000620675 G6PCP35575 357 aa10.79□□□□□ -0.68
NEK3-210ENST00000620675 PPP1R1AQ13522 171 aa10.79□□□□□ -0.68
NEK3-210ENST00000620675 C16orf82Q7Z2V1 217 aa10.79□□□□□ -0.68
NEK3-210ENST00000620675 CENPSQ8N2Z9 138 aa10.79□□□□□ -0.68
NEK3-210ENST00000620675 CCDC71LQ8N9Z2 235 aa10.79□□□□□ -0.68
NEK3-210ENST00000620675 OSR1Q8TAX0 266 aaPredicted RBP10.79□□□□□ -0.68
NEK3-210ENST00000620675 RHOVQ96L33 236 aa10.79□□□□□ -0.68
NEK3-210ENST00000620675 NPFFR1Q9GZQ6 430 aa10.79□□□□□ -0.68
NEK3-210ENST00000620675 HPRT1P00492 218 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 KRASP01116 189 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 CRYBA1P05813 215 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 KIR2DS2P43631 304 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 RAG2P55895 527 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 LINC01006Q8NI28 216 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 R3HDM4Q96D70 268 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 NOL4LQ96MY1 436 aaPredicted RBP10.78□□□□□ -0.68
NEK3-210ENST00000620675 TSNAXQ99598 290 aaKnown RBP10.78□□□□□ -0.68
NEK3-210ENST00000620675 C19orf24Q9BVV8 132 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 RAB18Q9NP72 206 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 FBXO7Q9Y3I1 522 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 WNK1Q9H4A3 2382 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 IGHV7-81A0A0B4J1V7 117 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 TSPAN9O75954 239 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 IGKV1-5P01602 117 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 UCP1P25874 307 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 S100GP29377 79 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 LGALS7P47929 136 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 DHODHQ02127 395 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 CBX3Q13185 183 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 TMEM187Q14656 261 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 PLGLAQ15195 96 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 OR4A47Q6IF82 309 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 SLC25A42Q86VD7 318 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 OR8H1Q8NGG4 311 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 OR52B4Q8NGK2 314 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 SCGB3A2Q96PL1 93 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 MDFIQ99750 246 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 RNF5Q99942 180 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 RASL11BQ9BPW5 248 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 PLEKHA2Q9HB19 425 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 KIAA1456Q9P272 454 aa10.78□□□□□ -0.68
NEK3-210ENST00000620675 A0A0G2JRQ6 117 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 MARCH11A6NNE9 402 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 CA2P00918 260 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 HKR1P10072 659 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 UBE2KP61086 200 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 ANKRD55Q3KP44 614 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 C10orf55Q5SWW7 151 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 LIN54Q6MZP7 749 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 MZT2BQ6NZ67 158 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 C10orf99Q6UWK7 81 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 PUSL1Q8N0Z8 303 aaKnown RBP10.77□□□□□ -0.69
NEK3-210ENST00000620675 ZFAND2BQ8WV99 257 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 SEC22AQ96IW7 307 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 FAM103A1Q9BTL3 118 aaKnown RBP10.77□□□□□ -0.69
NEK3-210ENST00000620675 TMEM222Q9H0R3 208 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 ZNF430Q9H8G1 570 aaPredicted RBP10.77□□□□□ -0.69
NEK3-210ENST00000620675 SERTAD4Q9NUC0 356 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 NSG2Q9Y328 171 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 SERPINE2P07093 398 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 OR9G9P0C7N8 305 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 NQO2P16083 231 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 VAMP1P23763 118 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 TAS2R31P59538 309 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 TMEM128Q5BJH2 165 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 PPP1R27Q86WC6 154 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 SGPP2Q8IWX5 399 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 Q8N2B8 174 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 CD300LFQ8TDQ1 290 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 CASTOR1Q8WTX7 329 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 GALNT14Q96FL9 552 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 PRSS22Q9GZN4 317 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 TMEM140Q9NV12 185 aa10.77□□□□□ -0.69
NEK3-210ENST00000620675 DBX1A6NMT0 343 aa10.76□□□□□ -0.69
NEK3-210ENST00000620675 E7EUB6 86 aa10.76□□□□□ -0.69
NEK3-210ENST00000620675 M0QZK8 103 aa10.76□□□□□ -0.69
NEK3-210ENST00000620675 SPDEFO95238 335 aa10.76□□□□□ -0.69
NEK3-210ENST00000620675 HLA-DRB1P01911 266 aa10.76□□□□□ -0.69
NEK3-210ENST00000620675 RIPPLY3P57055 190 aa10.76□□□□□ -0.69
NEK3-210ENST00000620675 UBE2MP61081 183 aaKnown RBP10.76□□□□□ -0.69
NEK3-210ENST00000620675 RPL15P61313 204 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms