RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 MARCH1Q8TCQ1 289 aa13.13□□□□□ -0.31
SHKBP1-219ENST00000599575 SERTAD4Q9NUC0 356 aa13.13□□□□□ -0.31
SHKBP1-219ENST00000599575 METTL1Q9UBP6 276 aaKnown RBP13.13□□□□□ -0.31
SHKBP1-219ENST00000599575 STAB1Q9NY15 2570 aa13.12□□□□□ -0.31
SHKBP1-219ENST00000599575 PIGBOS1A0A0B4J2F0 54 aa13.12□□□□□ -0.31
SHKBP1-219ENST00000599575 IGLV2-23P01705 113 aa13.12□□□□□ -0.31
SHKBP1-219ENST00000599575 IGF1P05019 195 aa13.12□□□□□ -0.31
SHKBP1-219ENST00000599575 NQO2P16083 231 aa13.12□□□□□ -0.31
SHKBP1-219ENST00000599575 PIGPP57054 158 aa13.12□□□□□ -0.31
SHKBP1-219ENST00000599575 BRWD1-AS2P59051 145 aa13.12□□□□□ -0.31
SHKBP1-219ENST00000599575 POU2AF1Q16633 256 aa13.12□□□□□ -0.31
SHKBP1-219ENST00000599575 PHLDA2Q53GA4 152 aa13.12□□□□□ -0.31
SHKBP1-219ENST00000599575 TBC1D26Q86UD7 250 aa13.12□□□□□ -0.31
SHKBP1-219ENST00000599575 CHPT1Q8WUD6 406 aa13.12□□□□□ -0.31
SHKBP1-219ENST00000599575 MRGPRFQ96AM1 343 aa13.12□□□□□ -0.31
SHKBP1-219ENST00000599575 RHOVQ96L33 236 aa13.12□□□□□ -0.31
SHKBP1-219ENST00000599575 WNT10AQ9GZT5 417 aa13.12□□□□□ -0.31
SHKBP1-219ENST00000599575 SIGLEC9Q9Y336 463 aa13.12□□□□□ -0.31
SHKBP1-219ENST00000599575 H0Y980 276 aa13.11□□□□□ -0.31
SHKBP1-219ENST00000599575 SLC25A17O43808 307 aa13.11□□□□□ -0.31
SHKBP1-219ENST00000599575 ATG12O94817 140 aa13.11□□□□□ -0.31
SHKBP1-219ENST00000599575 CRYGBP07316 175 aa13.11□□□□□ -0.31
SHKBP1-219ENST00000599575 CNTFRP26992 372 aa13.11□□□□□ -0.31
SHKBP1-219ENST00000599575 RBMS2Q15434 407 aaKnown RBP13.11□□□□□ -0.31
SHKBP1-219ENST00000599575 C9orf152Q5JTZ5 239 aa13.11□□□□□ -0.31
SHKBP1-219ENST00000599575 OR4A5Q8NH83 315 aa13.11□□□□□ -0.31
SHKBP1-219ENST00000599575 ZNF747Q9BV97 191 aa13.11□□□□□ -0.31
SHKBP1-219ENST00000599575 FBXL15Q9H469 300 aa13.11□□□□□ -0.31
SHKBP1-219ENST00000599575 TENM1Q9UKZ4 2725 aa13.11□□□□□ -0.31
SHKBP1-219ENST00000599575 SRRM4A7MD48 611 aaKnown RBP13.1□□□□□ -0.31
SHKBP1-219ENST00000599575 RAMP3O60896 148 aa13.1□□□□□ -0.31
SHKBP1-219ENST00000599575 OR2A4O95047 310 aa13.1□□□□□ -0.31
SHKBP1-219ENST00000599575 SERPINE2P07093 398 aa13.1□□□□□ -0.31
SHKBP1-219ENST00000599575 OR2B11Q5JQS5 317 aa13.1□□□□□ -0.31
SHKBP1-219ENST00000599575 MMD2Q8IY49 270 aa13.1□□□□□ -0.31
SHKBP1-219ENST00000599575 COMMD1Q8N668 190 aa13.1□□□□□ -0.31
SHKBP1-219ENST00000599575 C3orf56Q8N813 242 aa13.1□□□□□ -0.31
SHKBP1-219ENST00000599575 WFDC12Q8WWY7 111 aa13.1□□□□□ -0.31
SHKBP1-219ENST00000599575 OR2A7Q96R45 310 aa13.1□□□□□ -0.31
SHKBP1-219ENST00000599575 RTBDNQ9BSG5 229 aaPredicted RBP13.1□□□□□ -0.31
SHKBP1-219ENST00000599575 OR51J1Q9H342 316 aa13.1□□□□□ -0.31
SHKBP1-219ENST00000599575 C5orf66Q9H5L9 145 aa13.1□□□□□ -0.31
SHKBP1-219ENST00000599575 IGHV7-81A0A0B4J1V7 117 aa13.09□□□□□ -0.31
SHKBP1-219ENST00000599575 C3orf85A0A1B0GTC6 90 aa13.09□□□□□ -0.31
SHKBP1-219ENST00000599575 MAS1LP35410 378 aa13.09□□□□□ -0.31
SHKBP1-219ENST00000599575 CRIP2P52943 208 aaPredicted RBP13.09□□□□□ -0.31
SHKBP1-219ENST00000599575 ERVK-16P61578 105 aa13.09□□□□□ -0.31
SHKBP1-219ENST00000599575 SLC35B1P78383 322 aa13.09□□□□□ -0.31
SHKBP1-219ENST00000599575 CX3CL1P78423 397 aa13.09□□□□□ -0.31
SHKBP1-219ENST00000599575 SHISA2Q6UWI4 295 aa13.09□□□□□ -0.31
SHKBP1-219ENST00000599575 Q6ZS46 218 aa13.09□□□□□ -0.31
SHKBP1-219ENST00000599575 SGPP2Q8IWX5 399 aa13.09□□□□□ -0.31
SHKBP1-219ENST00000599575 TMEM68Q96MH6 324 aa13.09□□□□□ -0.31
SHKBP1-219ENST00000599575 GPHA2Q96T91 129 aa13.09□□□□□ -0.31
SHKBP1-219ENST00000599575 BET1LQ9NYM9 111 aa13.09□□□□□ -0.31
SHKBP1-219ENST00000599575 KCNIP3Q9Y2W7 256 aa13.09□□□□□ -0.31
SHKBP1-219ENST00000599575 TEX13DA0A0J9YY54 714 aaPredicted RBP13.08□□□□□ -0.32
SHKBP1-219ENST00000599575 ACTL6BO94805 426 aa13.08□□□□□ -0.32
SHKBP1-219ENST00000599575 SAA1P0DJI8 122 aaPredicted RBP13.08□□□□□ -0.32
SHKBP1-219ENST00000599575 VSIG10L2P0DP72 767 aa13.08□□□□□ -0.32
SHKBP1-219ENST00000599575 PI3P19957 117 aa13.08□□□□□ -0.32
SHKBP1-219ENST00000599575 UBE2MP61081 183 aaKnown RBP13.08□□□□□ -0.32
SHKBP1-219ENST00000599575 DHODHQ02127 395 aa13.08□□□□□ -0.32
SHKBP1-219ENST00000599575 TMEM267Q0VDI3 215 aaPredicted RBP13.08□□□□□ -0.32
SHKBP1-219ENST00000599575 PRSS8Q16651 343 aa13.08□□□□□ -0.32
SHKBP1-219ENST00000599575 ZNF585BQ52M93 769 aa13.08□□□□□ -0.32
SHKBP1-219ENST00000599575 PUSL1Q8N0Z8 303 aaKnown RBP13.08□□□□□ -0.32
SHKBP1-219ENST00000599575 TMEM167AQ8TBQ9 72 aa13.08□□□□□ -0.32
SHKBP1-219ENST00000599575 WIPF2Q8TF74 440 aaPredicted RBP13.08□□□□□ -0.32
SHKBP1-219ENST00000599575 GALNT14Q96FL9 552 aa13.08□□□□□ -0.32
SHKBP1-219ENST00000599575 TSC22D3Q99576 134 aa13.08□□□□□ -0.32
SHKBP1-219ENST00000599575 CRYM-AS1A6NIL9 109 aa13.07□□□□□ -0.32
SHKBP1-219ENST00000599575 MARCH11A6NNE9 402 aa13.07□□□□□ -0.32
SHKBP1-219ENST00000599575 LYRM1O43325 122 aa13.07□□□□□ -0.32
SHKBP1-219ENST00000599575 UPK1BO75841 260 aa13.07□□□□□ -0.32
SHKBP1-219ENST00000599575 KBTBD11O94819 623 aa13.07□□□□□ -0.32
SHKBP1-219ENST00000599575 NDUFB6O95139 128 aa13.07□□□□□ -0.32
SHKBP1-219ENST00000599575 ANXA3P12429 323 aa13.07□□□□□ -0.32
SHKBP1-219ENST00000599575 UCP1P25874 307 aa13.07□□□□□ -0.32
SHKBP1-219ENST00000599575 LPAR6P43657 344 aa13.07□□□□□ -0.32
SHKBP1-219ENST00000599575 TMEM128Q5BJH2 165 aa13.07□□□□□ -0.32
SHKBP1-219ENST00000599575 CENPVQ7Z7K6 275 aaPredicted RBP13.07□□□□□ -0.32
SHKBP1-219ENST00000599575 STPG2Q8N412 459 aa13.07□□□□□ -0.32
SHKBP1-219ENST00000599575 KLHDC1Q8N7A1 406 aa13.07□□□□□ -0.32
SHKBP1-219ENST00000599575 TAF15Q92804 592 aaKnown RBP eCLIP13.07□□□□□ -0.32
SHKBP1-219ENST00000599575 R3HDM4Q96D70 268 aa13.07□□□□□ -0.32
SHKBP1-219ENST00000599575 HSPB9Q9BQS6 159 aa13.07□□□□□ -0.32
SHKBP1-219ENST00000599575 NAA60Q9H7X0 242 aa13.07□□□□□ -0.32
SHKBP1-219ENST00000599575 SH2D7A6NKC9 451 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-219ENST00000599575 FCN1O00602 326 aa13.06□□□□□ -0.32
SHKBP1-219ENST00000599575 PLA2G10O15496 165 aa13.06□□□□□ -0.32
SHKBP1-219ENST00000599575 S1PR2O95136 353 aa13.06□□□□□ -0.32
SHKBP1-219ENST00000599575 CA2P00918 260 aa13.06□□□□□ -0.32
SHKBP1-219ENST00000599575 IL6RP08887 468 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-219ENST00000599575 VDAC1P21796 283 aa13.06□□□□□ -0.32
SHKBP1-219ENST00000599575 SRPXP78539 464 aa13.06□□□□□ -0.32
SHKBP1-219ENST00000599575 ASAH1Q13510 395 aa13.06□□□□□ -0.32
SHKBP1-219ENST00000599575 AKIRIN2Q53H80 203 aa13.06□□□□□ -0.32
SHKBP1-219ENST00000599575 MZT2BQ6NZ67 158 aa13.06□□□□□ -0.32
SHKBP1-219ENST00000599575 DMBX1Q8NFW5 382 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms