RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 CDX1P47902 265 aaPredicted RBP10.73□□□□□ -0.69
SCAF1-203ENST00000598359 RBMS2Q15434 407 aaKnown RBP10.73□□□□□ -0.69
SCAF1-203ENST00000598359 IGSF11Q5DX21 431 aa10.73□□□□□ -0.69
SCAF1-203ENST00000598359 LIN54Q6MZP7 749 aa10.73□□□□□ -0.69
SCAF1-203ENST00000598359 FAM71F2Q6NXP2 309 aa10.73□□□□□ -0.69
SCAF1-203ENST00000598359 CASTOR1Q8WTX7 329 aa10.73□□□□□ -0.69
SCAF1-203ENST00000598359 RAB3CQ96E17 227 aa10.73□□□□□ -0.69
SCAF1-203ENST00000598359 CLCC1Q96S66 551 aa10.73□□□□□ -0.69
SCAF1-203ENST00000598359 GNB4Q9HAV0 340 aa10.73□□□□□ -0.69
SCAF1-203ENST00000598359 RDH8Q9NYR8 311 aa10.73□□□□□ -0.69
SCAF1-203ENST00000598359 KIAA1456Q9P272 454 aa10.73□□□□□ -0.69
SCAF1-203ENST00000598359 ZNF230Q9UIE0 474 aaPredicted RBP10.73□□□□□ -0.69
SCAF1-203ENST00000598359 ELF5Q9UKW6 265 aaPredicted RBP10.73□□□□□ -0.69
SCAF1-203ENST00000598359 GAB2Q9UQC2 676 aa10.73□□□□□ -0.69
SCAF1-203ENST00000598359 TRAV41A0A0B4J266 112 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 MFNGO00587 321 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 RRHO14718 337 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 BET1O15155 118 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 FCGR3AP08637 254 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 GSTT2P0CG29 244 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 NAT1P18440 290 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 TBPP20226 339 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 LUMP51884 338 aaPredicted RBP10.72□□□□□ -0.69
SCAF1-203ENST00000598359 EGFEM1PQ0D2K5 195 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 KIAA0141Q14154 515 aaPredicted RBP10.72□□□□□ -0.69
SCAF1-203ENST00000598359 KIR2DS1Q14954 304 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 PLGLAQ15195 96 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 ECSCRQ19T08 205 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 DEFB121Q5J5C9 76 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 STEAP1BQ6NZ63 245 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 ZNF383Q8NA42 475 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 ZBTB8BQ8NAP8 495 aaPredicted RBP10.72□□□□□ -0.69
SCAF1-203ENST00000598359 OR8U1Q8NH10 309 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 GIMAP1Q8WWP7 306 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 EDARADDQ8WWZ3 215 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 MCUBQ9NWR8 336 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 SLC2A8Q9NY64 477 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 MGAT4AQ9UM21 535 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 WASHC3Q9Y3C0 194 aa10.72□□□□□ -0.69
SCAF1-203ENST00000598359 TMEM235A6NFC5 223 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 OR5H14A6NHG9 310 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 ITGB1BP1O14713 200 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 FABP7O15540 132 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 CD3DP04234 171 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 IGKV1-16P04430 117 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 OR5H8P0DN80 308 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 HIST1H1DP16402 221 aaKnown RBP10.71□□□□□ -0.69
SCAF1-203ENST00000598359 CX3CL1P78423 397 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 ARL6IP1Q15041 203 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 ZFP69Q49AA0 526 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 CDNFQ49AH0 187 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 OR5AN1Q8NGI8 311 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 MYOZ3Q8TDC0 251 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 ABHD5Q8WTS1 349 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 C4orf3Q8WVX3 66 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 DPF1Q92782 380 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 FAM103A1Q9BTL3 118 aaKnown RBP10.71□□□□□ -0.69
SCAF1-203ENST00000598359 RANGRFQ9HD47 186 aaPredicted RBP10.71□□□□□ -0.69
SCAF1-203ENST00000598359 TPSG1Q9NRR2 321 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 ZNF580Q9UK33 172 aa10.71□□□□□ -0.69
SCAF1-203ENST00000598359 COL7A1Q02388 2944 aa10.71□□□□□ -0.7
SCAF1-203ENST00000598359 SNRPGP15A8MWD9 76 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 M0R1X1 148 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 ARPC1BO15143 372 aaKnown RBP10.7□□□□□ -0.7
SCAF1-203ENST00000598359 SSX5O60225 188 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 SOX15O60248 233 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 RAB3DO95716 219 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 IGLV1-40P01703 118 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 C1QBP02746 253 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 OR8U9P0C7N5 309 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 ZNF735P0CB33 412 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 SULT1A3P0DMM9 295 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 SULT1A4P0DMN0 295 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 EGR2P11161 476 aaPredicted RBP10.7□□□□□ -0.7
SCAF1-203ENST00000598359 MC5RP33032 325 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 GNB1P62873 340 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 MRPS15P82914 257 aaKnown RBP10.7□□□□□ -0.7
SCAF1-203ENST00000598359 MEF2DQ14814 521 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 PSG5Q15238 335 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 FAAP20Q6NZ36 180 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 TMEM65Q6PI78 240 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 ZNF491Q8N8L2 437 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 OR11H1Q8NG94 326 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 OR4A4PQ8NGN8 299 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 C5orf30Q96GV9 206 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 FYTTD1Q96QD9 318 aaKnown RBP10.7□□□□□ -0.7
SCAF1-203ENST00000598359 MCRIP2Q9BUT9 160 aaKnown RBP10.7□□□□□ -0.7
SCAF1-203ENST00000598359 ALX4Q9H161 411 aaPredicted RBP10.7□□□□□ -0.7
SCAF1-203ENST00000598359 MED28Q9H204 178 aa10.7□□□□□ -0.7
SCAF1-203ENST00000598359 METTL1Q9UBP6 276 aaKnown RBP10.7□□□□□ -0.7
SCAF1-203ENST00000598359 IGKV1D-8A0A087WSZ0 117 aa10.69□□□□□ -0.7
SCAF1-203ENST00000598359 A0A1W2PN81 502 aa10.69□□□□□ -0.7
SCAF1-203ENST00000598359 CHRNA7P36544 502 aa10.69□□□□□ -0.7
SCAF1-203ENST00000598359 CBX5P45973 191 aa10.69□□□□□ -0.7
SCAF1-203ENST00000598359 RAB9AP51151 201 aa10.69□□□□□ -0.7
SCAF1-203ENST00000598359 RPS16P62249 146 aaKnown RBP10.69□□□□□ -0.7
SCAF1-203ENST00000598359 FCN2Q15485 313 aa10.69□□□□□ -0.7
SCAF1-203ENST00000598359 C19orf54Q5BKX5 351 aa10.69□□□□□ -0.7
SCAF1-203ENST00000598359 ASPHD1Q5U4P2 390 aa10.69□□□□□ -0.7
SCAF1-203ENST00000598359 NOXA1Q86UR1 476 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms