RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 DDB2Q92466 427 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 HARBI1Q96MB7 349 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 SLC5A7Q9GZV3 580 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 KLK15Q9H2R5 256 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 PARP11Q9NR21 331 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 VSIG4Q9Y279 399 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 SMAD5-AS1Q9Y6J3 95 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 CEPT1Q9Y6K0 416 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 CTDSP2O14595 271 aa13.6□□□□□ -0.23
SHKBP1-203ENST00000594298 ZNF616Q08AN1 781 aa13.6□□□□□ -0.23
SHKBP1-203ENST00000594298 VMA21Q3ZAQ7 101 aa13.6□□□□□ -0.23
SHKBP1-203ENST00000594298 ACTBL2Q562R1 376 aa13.6□□□□□ -0.23
SHKBP1-203ENST00000594298 TMEM65Q6PI78 240 aa13.6□□□□□ -0.23
SHKBP1-203ENST00000594298 ZNF562Q6V9R5 426 aa13.6□□□□□ -0.23
SHKBP1-203ENST00000594298 DCUN1D5Q9BTE7 237 aa13.6□□□□□ -0.23
SHKBP1-203ENST00000594298 GNB4Q9HAV0 340 aa13.6□□□□□ -0.23
SHKBP1-203ENST00000594298 CCL28Q9NRJ3 127 aa13.6□□□□□ -0.23
SHKBP1-203ENST00000594298 LINC00473A8K010 186 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 SLC25A17O43808 307 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 CRYZL1O95825 349 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 HLA-DMAP28067 261 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 KIR2DS2P43631 304 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 RFX2P48378 723 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 FXYD4P59646 89 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 TSPAN5P62079 268 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 CX3CL1P78423 397 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 MRPS10P82664 201 aaKnown RBP13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 ZNF429Q86V71 674 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 PPP1R27Q86WC6 154 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 LYSMD2Q8IV50 215 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 MFSD4AQ8N468 514 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 ABHD5Q8WTS1 349 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 TCTEX1D2Q8WW35 142 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 FCAMRQ8WWV6 532 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 CLCC1Q96S66 551 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 ZNF2Q9BSG1 426 aaPredicted RBP13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 MIXL1Q9H2W2 232 aa13.59□□□□□ -0.23
SHKBP1-203ENST00000594298 HUWE1Q7Z6Z7 4374 aaKnown RBP13.58□□□□□ -0.23
SHKBP1-203ENST00000594298 TRAV41A0A0B4J266 112 aa13.58□□□□□ -0.24
SHKBP1-203ENST00000594298 G3V318 75 aa13.58□□□□□ -0.24
SHKBP1-203ENST00000594298 ATP6V0E1O15342 81 aa13.58□□□□□ -0.24
SHKBP1-203ENST00000594298 FCGR3BO75015 233 aa13.58□□□□□ -0.24
SHKBP1-203ENST00000594298 IGLV2-14P01704 120 aa13.58□□□□□ -0.24
SHKBP1-203ENST00000594298 HRH1P35367 487 aa13.58□□□□□ -0.24
SHKBP1-203ENST00000594298 CATR1Q13166 79 aa13.58□□□□□ -0.24
SHKBP1-203ENST00000594298 TCTEX1D1Q8N7M0 179 aa13.58□□□□□ -0.24
SHKBP1-203ENST00000594298 TEX45Q8NA69 505 aa13.58□□□□□ -0.24
SHKBP1-203ENST00000594298 OR4S2Q8NH73 311 aa13.58□□□□□ -0.24
SHKBP1-203ENST00000594298 DIRAS2Q96HU8 199 aa13.58□□□□□ -0.24
SHKBP1-203ENST00000594298 C6orf62Q9GZU0 229 aaPredicted RBP13.58□□□□□ -0.24
SHKBP1-203ENST00000594298 TAS2R8Q9NYW2 309 aa13.58□□□□□ -0.24
SHKBP1-203ENST00000594298 WSB1Q9Y6I7 421 aa13.58□□□□□ -0.24
SHKBP1-203ENST00000594298 FCN1O00602 326 aa13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 CREBL2O60519 120 aaPredicted RBP13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 CNIH1O95406 144 aa13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 LY86O95711 162 aa13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 CA2P00918 260 aa13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 IGLV2-23P01705 113 aa13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 RAB9AP51151 201 aa13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 UBE2KP61086 200 aa13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 GNB1P62873 340 aa13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 RPL30P62888 115 aaKnown RBP13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 PYHIN1Q6K0P9 492 aa13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 LPCAT3Q6P1A2 487 aa13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 TMEM17Q86X19 198 aa13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 LAX1Q8IWV1 398 aa13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 MINDY2Q8NBR6 621 aa13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 MCFD2Q8NI22 146 aa13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 MUC7Q8TAX7 377 aa13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 MOB3AQ96BX8 217 aa13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 AIFM2Q9BRQ8 373 aa13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 RSL24D1Q9UHA3 163 aaKnown RBP13.57□□□□□ -0.24
SHKBP1-203ENST00000594298 GABARAPH6UMI1 98 aa13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 ZNF701M0R085 212 aaPredicted RBP13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 IFNA6P05013 189 aa13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 CRYGBP07316 175 aa13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 S100GP29377 79 aa13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 CD40LGP29965 261 aa13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 CRIP2P52943 208 aaPredicted RBP13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 SSBP1Q04837 148 aaKnown RBP13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 EIF4EBP1Q13541 118 aaPredicted RBP13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 FXYD3Q14802 87 aa13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 CASC10Q5T4H9 136 aa13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 SBSPONQ8IVN8 264 aa13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 CMTM1Q8IZ96 169 aa13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 POC5Q8NA72 575 aa13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 OR52I2Q8NH67 350 aa13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 DCUN1D4Q92564 292 aa13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 ABHD1Q96SE0 405 aa13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 SLIRPQ9GZT3 109 aaKnown RBP13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 MTFP1Q9UDX5 166 aa13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 NUBP2Q9Y5Y2 271 aa13.56□□□□□ -0.24
SHKBP1-203ENST00000594298 SRRM4A7MD48 611 aaKnown RBP13.55□□□□□ -0.24
SHKBP1-203ENST00000594298 OVOL1O14753 267 aa13.55□□□□□ -0.24
SHKBP1-203ENST00000594298 TNFSF12O43508 249 aa13.55□□□□□ -0.24
SHKBP1-203ENST00000594298 HRASP01112 189 aa13.55□□□□□ -0.24
SHKBP1-203ENST00000594298 TBPP20226 339 aa13.55□□□□□ -0.24
SHKBP1-203ENST00000594298 IL18Q14116 193 aa13.55□□□□□ -0.24
SHKBP1-203ENST00000594298 ECSCRQ19T08 205 aa13.55□□□□□ -0.24
SHKBP1-203ENST00000594298 AKIRIN2Q53H80 203 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms