RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 CLCC1Q96S66 551 aa13.15□□□□□ -0.3
RETREG3-210ENST00000590541 ST6GALNAC5Q9BVH7 336 aa13.15□□□□□ -0.3
RETREG3-210ENST00000590541 RHBDL2Q9NX52 303 aa13.15□□□□□ -0.3
RETREG3-210ENST00000590541 IZUMO1RA6ND01 250 aa13.14□□□□□ -0.31
RETREG3-210ENST00000590541 BRI3O95415 125 aa13.14□□□□□ -0.31
RETREG3-210ENST00000590541 SNRPBP14678 240 aaKnown RBP13.14□□□□□ -0.31
RETREG3-210ENST00000590541 ZP3P21754 424 aa13.14□□□□□ -0.31
RETREG3-210ENST00000590541 LINC00205P59089 165 aa13.14□□□□□ -0.31
RETREG3-210ENST00000590541 FXYD3Q14802 87 aa13.14□□□□□ -0.31
RETREG3-210ENST00000590541 NEDD8Q15843 81 aa13.14□□□□□ -0.31
RETREG3-210ENST00000590541 LFNGQ8NES3 379 aa13.14□□□□□ -0.31
RETREG3-210ENST00000590541 LGALS14Q8TCE9 139 aa13.14□□□□□ -0.31
RETREG3-210ENST00000590541 VCX3AQ9NNX9 186 aa13.14□□□□□ -0.31
RETREG3-210ENST00000590541 OR2W1Q9Y3N9 320 aa13.14□□□□□ -0.31
RETREG3-210ENST00000590541 KMT2AQ03164 3969 aa13.13□□□□□ -0.31
RETREG3-210ENST00000590541 LOC100506127A0A0U1RQW1 187 aa13.13□□□□□ -0.31
RETREG3-210ENST00000590541 TMEM235A6NFC5 223 aa13.13□□□□□ -0.31
RETREG3-210ENST00000590541 SHOXO15266 292 aa13.13□□□□□ -0.31
RETREG3-210ENST00000590541 CNIH1O95406 144 aa13.13□□□□□ -0.31
RETREG3-210ENST00000590541 IGLV2-23P01705 113 aa13.13□□□□□ -0.31
RETREG3-210ENST00000590541 TRGV3P03979 118 aa13.13□□□□□ -0.31
RETREG3-210ENST00000590541 DUTP33316 252 aaKnown RBP13.13□□□□□ -0.31
RETREG3-210ENST00000590541 MXD1Q05195 221 aa13.13□□□□□ -0.31
RETREG3-210ENST00000590541 LCN12Q6JVE5 192 aa13.13□□□□□ -0.31
RETREG3-210ENST00000590541 ZNF645Q8N7E2 425 aa13.13□□□□□ -0.31
RETREG3-210ENST00000590541 TEX45Q8NA69 505 aa13.13□□□□□ -0.31
RETREG3-210ENST00000590541 OSR1Q8TAX0 266 aaPredicted RBP13.13□□□□□ -0.31
RETREG3-210ENST00000590541 DDB2Q92466 427 aa13.13□□□□□ -0.31
RETREG3-210ENST00000590541 PLEKHA3Q9HB20 300 aa13.13□□□□□ -0.31
RETREG3-210ENST00000590541 IGKV1D-8A0A087WSZ0 117 aa13.12□□□□□ -0.31
RETREG3-210ENST00000590541 CREBL2O60519 120 aaPredicted RBP13.12□□□□□ -0.31
RETREG3-210ENST00000590541 HLA-DQB1P01920 261 aa13.12□□□□□ -0.31
RETREG3-210ENST00000590541 CRYGBP07316 175 aa13.12□□□□□ -0.31
RETREG3-210ENST00000590541 CSN3P07498 182 aa13.12□□□□□ -0.31
RETREG3-210ENST00000590541 SYNJ2BPP57105 145 aa13.12□□□□□ -0.31
RETREG3-210ENST00000590541 VMA21Q3ZAQ7 101 aa13.12□□□□□ -0.31
RETREG3-210ENST00000590541 IDNKQ5T6J7 187 aa13.12□□□□□ -0.31
RETREG3-210ENST00000590541 Q8N402 240 aa13.12□□□□□ -0.31
RETREG3-210ENST00000590541 BVESQ8NE79 360 aa13.12□□□□□ -0.31
RETREG3-210ENST00000590541 NUDCD2Q8WVJ2 157 aa13.12□□□□□ -0.31
RETREG3-210ENST00000590541 DIABLOQ9NR28 239 aa13.12□□□□□ -0.31
RETREG3-210ENST00000590541 SIGLEC8Q9NYZ4 499 aa13.12□□□□□ -0.31
RETREG3-210ENST00000590541 ANXA10Q9UJ72 324 aa13.12□□□□□ -0.31
RETREG3-210ENST00000590541 ADAM30Q9UKF2 790 aa13.12□□□□□ -0.31
RETREG3-210ENST00000590541 ELF5Q9UKW6 265 aaPredicted RBP13.12□□□□□ -0.31
RETREG3-210ENST00000590541 PRELID3BQ9Y3B1 194 aa13.12□□□□□ -0.31
RETREG3-210ENST00000590541 DNAH10Q8IVF4 4471 aa13.12□□□□□ -0.31
RETREG3-210ENST00000590541 A0A087WXM4 84 aa13.11□□□□□ -0.31
RETREG3-210ENST00000590541 A0A0G2JLM5 398 aa13.11□□□□□ -0.31
RETREG3-210ENST00000590541 ANKRD34BA5PLL1 514 aa13.11□□□□□ -0.31
RETREG3-210ENST00000590541 UBE2KP61086 200 aa13.11□□□□□ -0.31
RETREG3-210ENST00000590541 GRPEL2Q8TAA5 225 aa13.11□□□□□ -0.31
RETREG3-210ENST00000590541 C5orf30Q96GV9 206 aa13.11□□□□□ -0.31
RETREG3-210ENST00000590541 SPATA2Q9UM82 520 aa13.11□□□□□ -0.31
RETREG3-210ENST00000590541 TNFAIP8O95379 198 aa13.1□□□□□ -0.31
RETREG3-210ENST00000590541 MECP2P51608 486 aaKnown RBP13.1□□□□□ -0.31
RETREG3-210ENST00000590541 POC5Q8NA72 575 aa13.1□□□□□ -0.31
RETREG3-210ENST00000590541 SLC25A38Q96DW6 304 aa13.1□□□□□ -0.31
RETREG3-210ENST00000590541 MRPS7Q9Y2R9 242 aaKnown RBP13.1□□□□□ -0.31
RETREG3-210ENST00000590541 KIAA1109Q2LD37 5005 aa13.1□□□□□ -0.31
RETREG3-210ENST00000590541 TRAV18A0A075B6X5 111 aa13.09□□□□□ -0.31
RETREG3-210ENST00000590541 C13orf42A0A1B0GVH6 325 aa13.09□□□□□ -0.31
RETREG3-210ENST00000590541 LINC00473A8K010 186 aa13.09□□□□□ -0.31
RETREG3-210ENST00000590541 SSX5O60225 188 aa13.09□□□□□ -0.31
RETREG3-210ENST00000590541 CRYZL1O95825 349 aa13.09□□□□□ -0.31
RETREG3-210ENST00000590541 CLEC2LP0C7M8 214 aa13.09□□□□□ -0.31
RETREG3-210ENST00000590541 NFYAP23511 347 aaPredicted RBP13.09□□□□□ -0.31
RETREG3-210ENST00000590541 CBX5P45973 191 aa13.09□□□□□ -0.31
RETREG3-210ENST00000590541 CD81P60033 236 aa13.09□□□□□ -0.31
RETREG3-210ENST00000590541 MSMO1Q15800 293 aa13.09□□□□□ -0.31
RETREG3-210ENST00000590541 BEST4Q8NFU0 473 aa13.09□□□□□ -0.31
RETREG3-210ENST00000590541 HSD17B10Q99714 261 aaKnown RBP13.09□□□□□ -0.31
RETREG3-210ENST00000590541 RNF167Q9H6Y7 350 aa13.09□□□□□ -0.31
RETREG3-210ENST00000590541 ZNF355PQ9NSJ1 428 aa13.09□□□□□ -0.31
RETREG3-210ENST00000590541 RBMX2Q9Y388 322 aaKnown RBP13.09□□□□□ -0.31
RETREG3-210ENST00000590541 SRRM4A7MD48 611 aaKnown RBP13.08□□□□□ -0.32
RETREG3-210ENST00000590541 AIREO43918 545 aa13.08□□□□□ -0.32
RETREG3-210ENST00000590541 TUSC2O75896 110 aa13.08□□□□□ -0.32
RETREG3-210ENST00000590541 AADACP22760 399 aa13.08□□□□□ -0.32
RETREG3-210ENST00000590541 ARPC4P59998 168 aa13.08□□□□□ -0.32
RETREG3-210ENST00000590541 SSBP2P81877 361 aaPredicted RBP13.08□□□□□ -0.32
RETREG3-210ENST00000590541 PJVKQ0ZLH3 352 aa13.08□□□□□ -0.32
RETREG3-210ENST00000590541 KCTD9Q7L273 389 aa13.08□□□□□ -0.32
RETREG3-210ENST00000590541 RPP25LQ8N5L8 163 aaKnown RBP13.08□□□□□ -0.32
RETREG3-210ENST00000590541 DEFB125Q8N687 156 aa13.08□□□□□ -0.32
RETREG3-210ENST00000590541 TSPAN14Q8NG11 270 aa13.08□□□□□ -0.32
RETREG3-210ENST00000590541 OR5H6Q8NGV6 325 aa13.08□□□□□ -0.32
RETREG3-210ENST00000590541 NEURL2Q9BR09 285 aa13.08□□□□□ -0.32
RETREG3-210ENST00000590541 ACTL6BO94805 426 aa13.07□□□□□ -0.32
RETREG3-210ENST00000590541 TPPPO94811 219 aa13.07□□□□□ -0.32
RETREG3-210ENST00000590541 TRBV12-3P01733 135 aa13.07□□□□□ -0.32
RETREG3-210ENST00000590541 CD7P09564 240 aa13.07□□□□□ -0.32
RETREG3-210ENST00000590541 CDK10Q15131 360 aa13.07□□□□□ -0.32
RETREG3-210ENST00000590541 PRSS8Q16651 343 aa13.07□□□□□ -0.32
RETREG3-210ENST00000590541 ZNF66Q6ZN08 573 aa13.07□□□□□ -0.32
RETREG3-210ENST00000590541 HOGA1Q86XE5 327 aa13.07□□□□□ -0.32
RETREG3-210ENST00000590541 VSTM2AQ8TAG5 236 aa13.07□□□□□ -0.32
RETREG3-210ENST00000590541 S100A16Q96FQ6 103 aaKnown RBP13.07□□□□□ -0.32
RETREG3-210ENST00000590541 USMG5Q96IX5 58 aa13.07□□□□□ -0.32
RETREG3-210ENST00000590541 PHB2Q99623 299 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms