RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 METTL15P1P0C7V9 234 aa8.54□□□□□ -1.04
VPS25-203ENST00000589520 LOXP28300 417 aaPredicted RBP8.54□□□□□ -1.04
VPS25-203ENST00000589520 SNCAP37840 140 aa8.54□□□□□ -1.04
VPS25-203ENST00000589520 TFF3Q07654 80 aa8.54□□□□□ -1.04
VPS25-203ENST00000589520 SLC38A11Q08AI6 406 aa8.54□□□□□ -1.04
VPS25-203ENST00000589520 IZUMO4Q1ZYL8 232 aa8.54□□□□□ -1.04
VPS25-203ENST00000589520 TMEM155Q4W5P6 130 aa8.54□□□□□ -1.04
VPS25-203ENST00000589520 RPL39P5Q59GN2 51 aa8.54□□□□□ -1.04
VPS25-203ENST00000589520 OR2B11Q5JQS5 317 aa8.54□□□□□ -1.04
VPS25-203ENST00000589520 FAM53AQ6NSI3 398 aaPredicted RBP8.54□□□□□ -1.04
VPS25-203ENST00000589520 DUX4L9Q6RFH8 374 aaPredicted RBP8.54□□□□□ -1.04
VPS25-203ENST00000589520 TMEM182Q6ZP80 229 aaPredicted RBP8.54□□□□□ -1.04
VPS25-203ENST00000589520 ZNF295-AS1Q8N0V1 137 aa8.54□□□□□ -1.04
VPS25-203ENST00000589520 ZCCHC24Q8N2G6 241 aaKnown RBP8.54□□□□□ -1.04
VPS25-203ENST00000589520 ZNF525Q8N782 197 aa8.54□□□□□ -1.04
VPS25-203ENST00000589520 OSR1Q8TAX0 266 aaPredicted RBP8.54□□□□□ -1.04
VPS25-203ENST00000589520 NEUROG1Q92886 237 aa8.54□□□□□ -1.04
VPS25-203ENST00000589520 RBMXL1Q96E39 390 aaKnown RBP8.54□□□□□ -1.04
VPS25-203ENST00000589520 TIMD4Q96H15 378 aa8.54□□□□□ -1.04
VPS25-203ENST00000589520 NARS2Q96I59 477 aaKnown RBP8.54□□□□□ -1.04
VPS25-203ENST00000589520 PCGF1Q9BSM1 259 aa8.54□□□□□ -1.04
VPS25-203ENST00000589520 TMEM147Q9BVK8 224 aa8.54□□□□□ -1.04
VPS25-203ENST00000589520 DCAF16Q9NXF7 216 aa8.54□□□□□ -1.04
VPS25-203ENST00000589520 MIOXQ9UGB7 285 aa8.54□□□□□ -1.04
VPS25-203ENST00000589520 PRNDQ9UKY0 176 aa8.54□□□□□ -1.04
VPS25-203ENST00000589520 KIAA2026Q5HYC2 2103 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 C2CD3Q4AC94 2353 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 C17orf112F2Z3M2 114 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 F8W036 122 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 SLC31A2O15432 143 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 NXPH3O95157 252 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 SNAPINO95295 136 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 PLAUP00749 431 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 APOA2P02652 100 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 H2AFB1P0C5Y9 115 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 MC5RP33032 325 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 HSPE1P61604 102 aaKnown RBP8.53□□□□□ -1.04
VPS25-203ENST00000589520 RAB11AP62491 216 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 RELBQ01201 579 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 ZNF616Q08AN1 781 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 TMEM267Q0VDI3 215 aaPredicted RBP8.53□□□□□ -1.04
VPS25-203ENST00000589520 ZNF273Q14593 569 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 THNSL2Q86YJ6 484 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 TGIF2LYQ8IUE0 185 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 ZNF383Q8NA42 475 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 OR4A5Q8NH83 315 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 OR9G1Q8NH87 305 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 SUN5Q8TC36 379 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 H1FXQ92522 213 aaKnown RBP8.53□□□□□ -1.04
VPS25-203ENST00000589520 RAB1CQ92928 201 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 WDR61Q9GZS3 305 aaKnown RBP8.53□□□□□ -1.04
VPS25-203ENST00000589520 NARFLQ9H6Q4 476 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 UNKLQ9H9P5 680 aaKnown RBP8.53□□□□□ -1.04
VPS25-203ENST00000589520 SLC35D1Q9NTN3 355 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 TMEM140Q9NV12 185 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 FOXA2Q9Y261 457 aaPredicted RBP8.53□□□□□ -1.04
VPS25-203ENST00000589520 ZNF257Q9Y2Q1 563 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 FBXO7Q9Y3I1 522 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 KPTNQ9Y664 436 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 POLEQ07864 2286 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 DYSFO75923 2080 aa8.53□□□□□ -1.04
VPS25-203ENST00000589520 ATMQ13315 3056 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 C15orf61A6NNL5 157 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 PMS2P5A8MQ11 134 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 H3BP45 60 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 J3QR06 171 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 MPDU1O75352 247 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 IGHV2-70P01814 119 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 IL6RP08887 468 aaPredicted RBP8.52□□□□□ -1.05
VPS25-203ENST00000589520 OR9G9P0C7N8 305 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 CT45A6P0DMU7 189 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 CT45A5P0DMU8 189 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 CT45A7P0DMV0 189 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 ZNF137PP52743 207 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 PRRX1P54821 245 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 DLX6P56179 175 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 PMS2P11Q13670 270 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 LY6DQ14210 128 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 GUK1Q16774 197 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 VWC2Q2TAL6 325 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 VSTM2AQ8TAG5 236 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 FAM213BQ8TBF2 198 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 TAF15Q92804 592 aaKnown RBP eCLIP8.52□□□□□ -1.05
VPS25-203ENST00000589520 RHOVQ96L33 236 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 OR4C12Q96R67 309 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 QTRT1Q9BXR0 403 aaKnown RBP8.52□□□□□ -1.05
VPS25-203ENST00000589520 SH3BGRL3Q9H299 93 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 ENY2Q9NPA8 101 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 BET1LQ9NYM9 111 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 KIAA1456Q9P272 454 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 CACNA1DQ01668 2161 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 FBN2P35556 2912 aa8.52□□□□□ -1.05
VPS25-203ENST00000589520 MEX3AA1L020 520 aaKnown RBP8.51□□□□□ -1.05
VPS25-203ENST00000589520 FNDC10F2Z333 226 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 UPK2O00526 184 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 SIAH2O43255 324 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 NDUFS6O75380 124 aaKnown RBP8.51□□□□□ -1.05
VPS25-203ENST00000589520 COL8A2P25067 703 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 TAGLN2P37802 199 aaKnown RBP8.51□□□□□ -1.05
VPS25-203ENST00000589520 GNG10P50151 68 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms