RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 SRRM4A7MD48 611 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 HAX1O00165 279 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 KCNAB3O43448 404 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 NQO2P16083 231 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 MDKP21741 143 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 BRWD1-AS2P59051 145 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 DEFA1P59665 94 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 DEFA3P59666 94 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 UBE2KP61086 200 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 Q6ZS46 218 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 SSX9Q7RTT3 188 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 SLC35E3Q7Z769 313 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 SGPP2Q8IWX5 399 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 DMBX1Q8NFW5 382 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 VSTM2AQ8TAG5 236 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 ABHD5Q8WTS1 349 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 C16orf95Q9H693 158 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 NAA60Q9H7X0 242 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 PLEKHA2Q9HB19 425 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 KCNIP3Q9Y2W7 256 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 SIGLEC9Q9Y336 463 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 RNF114Q9Y508 228 aa11.52□□□□□ -0.57
NPLOC4-209ENST00000572760 FAM240BA0A1B0GVZ2 78 aa11.51□□□□□ -0.57
NPLOC4-209ENST00000572760 H0Y980 276 aa11.51□□□□□ -0.57
NPLOC4-209ENST00000572760 S1PR2O95136 353 aa11.51□□□□□ -0.57
NPLOC4-209ENST00000572760 NDUFB6O95139 128 aa11.51□□□□□ -0.57
NPLOC4-209ENST00000572760 IGLV2-23P01705 113 aa11.51□□□□□ -0.57
NPLOC4-209ENST00000572760 TAS2R31P59538 309 aa11.51□□□□□ -0.57
NPLOC4-209ENST00000572760 TRIM16LQ309B1 348 aa11.51□□□□□ -0.57
NPLOC4-209ENST00000572760 C12orf54Q6X4T0 127 aa11.51□□□□□ -0.57
NPLOC4-209ENST00000572760 FOXRED2Q8IWF2 684 aa11.51□□□□□ -0.57
NPLOC4-209ENST00000572760 CENPSQ8N2Z9 138 aa11.51□□□□□ -0.57
NPLOC4-209ENST00000572760 TEX45Q8NA69 505 aa11.51□□□□□ -0.57
NPLOC4-209ENST00000572760 ADAD2Q8NCV1 583 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-209ENST00000572760 LINC01006Q8NI28 216 aa11.51□□□□□ -0.57
NPLOC4-209ENST00000572760 R3HDM4Q96D70 268 aa11.51□□□□□ -0.57
NPLOC4-209ENST00000572760 RHOVQ96L33 236 aa11.51□□□□□ -0.57
NPLOC4-209ENST00000572760 FAM212BQ9NTI7 297 aaPredicted RBP11.51□□□□□ -0.57
NPLOC4-209ENST00000572760 COMMD9Q9P000 198 aa11.51□□□□□ -0.57
NPLOC4-209ENST00000572760 CRYM-AS1A6NIL9 109 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 CREBL2O60519 120 aaPredicted RBP11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 B3GALNT1O75752 331 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 ACTL6BO94805 426 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 OR2A4O95047 310 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 CNIH1O95406 144 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 IGHG2P01859 326 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 HLA-DRB1P01911 266 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 OR5AC1P0C628 307 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 SAA1P0DJI8 122 aaPredicted RBP11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 VSIG10L2P0DP72 767 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 ANXA3P12429 323 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 RPA2P15927 270 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 GNB1P62873 340 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 DHODHQ02127 395 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 ASAH1Q13510 395 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 TMEM95Q3KNT9 176 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 SP6Q3SY56 376 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 AWAT1Q58HT5 328 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 PPP1R27Q86WC6 154 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 VKORC1L1Q8N0U8 176 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 Q8N2B8 174 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 OR2A7Q96R45 310 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 TP53RKQ96S44 253 aa11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 TET2Q6N021 2002 aaPredicted RBP11.5□□□□□ -0.57
NPLOC4-209ENST00000572760 ARPC1BO15143 372 aaKnown RBP11.49□□□□□ -0.57
NPLOC4-209ENST00000572760 ATG12O94817 140 aa11.49□□□□□ -0.57
NPLOC4-209ENST00000572760 CA2P00918 260 aa11.49□□□□□ -0.57
NPLOC4-209ENST00000572760 KRASP01116 189 aa11.49□□□□□ -0.57
NPLOC4-209ENST00000572760 BTCP35070 178 aa11.49□□□□□ -0.57
NPLOC4-209ENST00000572760 IFITM3Q01628 133 aa11.49□□□□□ -0.57
NPLOC4-209ENST00000572760 ZNF585BQ52M93 769 aa11.49□□□□□ -0.57
NPLOC4-209ENST00000572760 MMD2Q8IY49 270 aa11.49□□□□□ -0.57
NPLOC4-209ENST00000572760 RNASE11Q8TAA1 199 aaKnown RBP11.49□□□□□ -0.57
NPLOC4-209ENST00000572760 ENKURQ8TC29 256 aa11.49□□□□□ -0.57
NPLOC4-209ENST00000572760 TMEM230Q96A57 120 aa11.49□□□□□ -0.57
NPLOC4-209ENST00000572760 HSPB9Q9BQS6 159 aa11.49□□□□□ -0.57
NPLOC4-209ENST00000572760 PARP11Q9NR21 331 aa11.49□□□□□ -0.57
NPLOC4-209ENST00000572760 TPSG1Q9NRR2 321 aa11.49□□□□□ -0.57
NPLOC4-209ENST00000572760 TBC1D24Q9ULP9 559 aa11.49□□□□□ -0.57
NPLOC4-209ENST00000572760 MMP24Q9Y5R2 645 aa11.49□□□□□ -0.57
NPLOC4-209ENST00000572760 MARCH11A6NNE9 402 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 AP4M1O00189 453 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 FCN1O00602 326 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 KBTBD11O94819 623 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 TCRBP04435 133 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 CRYGBP07316 175 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 VAMP1P23763 118 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 G6PCP35575 357 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 AKR1C2P52895 323 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 CX3CL1P78423 397 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 TNXAQ16473 311 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 PRSS8Q16651 343 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 KRTAP21-3Q3LHN1 58 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 TMEM128Q5BJH2 165 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 OR4A47Q6IF82 309 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 CENPVQ7Z7K6 275 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 ZNF695Q8IW36 515 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 OR51J1Q9H342 316 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 SERTAD4Q9NUC0 356 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 TMEM140Q9NV12 185 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms