RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 RNASEK-C17orf49H0YIS7 233 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 ARPC5O15511 151 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 GPR137BO60478 399 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 FCGR3BO75015 233 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 NQO2P16083 231 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 CD1BP29016 333 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 LGALS7P47929 136 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 NKX2-5P52952 324 aaPredicted RBP7.98□□□□□ -1.13
SF3B3-207ENST00000566095 UBA52P62987 128 aaKnown RBP7.98□□□□□ -1.13
SF3B3-207ENST00000566095 IFITM2Q01629 132 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 SP6Q3SY56 376 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 RPL39P5Q59GN2 51 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 Q5BKY6 102 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 TMUB2Q71RG4 321 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 MOB3BQ86TA1 216 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 KRTAP1-3Q8IUG1 177 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 FOXRED2Q8IWF2 684 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 PUSL1Q8N0Z8 303 aaKnown RBP7.98□□□□□ -1.13
SF3B3-207ENST00000566095 LHFPL5Q8TAF8 219 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 FLYWCH2Q96CP2 140 aaKnown RBP7.98□□□□□ -1.13
SF3B3-207ENST00000566095 SEC22AQ96IW7 307 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 CIB3Q96Q77 187 aaPredicted RBP7.98□□□□□ -1.13
SF3B3-207ENST00000566095 TSNAXQ99598 290 aaKnown RBP7.98□□□□□ -1.13
SF3B3-207ENST00000566095 ZNF251Q9BRH9 671 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 SLC25A31Q9H0C2 315 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.98□□□□□ -1.13
SF3B3-207ENST00000566095 MBD2Q9UBB5 411 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 HECTD1Q9ULT8 2610 aa7.98□□□□□ -1.13
SF3B3-207ENST00000566095 TACC2O95359 2948 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 POLQO75417 2590 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 TRAV40A0A0B4J280 105 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 IGHV1-3A0A0C4DH29 117 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 CCSO14618 274 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 BCL2L11O43521 198 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 PROP1O75360 226 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 JTBO76095 146 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 MBPP02686 304 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-207ENST00000566095 FBP1P09467 338 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 FAM106CPP0CH98 169 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 FOSL1P15407 271 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 CXCL2P19875 107 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 LPAR6P43657 344 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 RAB32Q13637 225 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 VMA21Q3ZAQ7 101 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 H2BFWTQ7Z2G1 175 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 ZNF429Q86V71 674 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 MRPL41Q8IXM3 137 aaKnown RBP7.97□□□□□ -1.13
SF3B3-207ENST00000566095 ODF3L1Q8IXM7 274 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 STPG2Q8N412 459 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 DMBX1Q8NFW5 382 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 OR5AN1Q8NGI8 311 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 OR4A5Q8NH83 315 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 ST6GALNAC6Q969X2 333 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 ARPC5LQ9BPX5 153 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 NABP2Q9BQ15 211 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 MS4A7Q9GZW8 240 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-207ENST00000566095 ARL6Q9H0F7 186 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 C11orf1Q9H5F2 150 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 FBN2P35556 2912 aa7.97□□□□□ -1.13
SF3B3-207ENST00000566095 CENPVL3A0A0U1RRI6 287 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 BTBD17A6NE02 478 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 H0YIZ8 118 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 H0YJW9 148 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 SMLR1H3BR10 107 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 K7EPK0 472 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 SMAD7O15105 426 aaKnown RBP7.96□□□□□ -1.14
SF3B3-207ENST00000566095 SHOXO15266 292 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 CD5LO43866 347 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 SOX15O60248 233 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 TSC22D2O75157 780 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 SPDEFO95238 335 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 CRYZL1O95825 349 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 CT45A6P0DMU7 189 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 CT45A5P0DMU8 189 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 CT45A7P0DMV0 189 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 SAA4P35542 130 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 KLRD1Q13241 179 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 AANATQ16613 207 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 ZNF680Q8NEM1 530 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 OR8H1Q8NGG4 311 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 OR2T10Q8NGZ9 312 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 R3HDM4Q96D70 268 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 SMIM8Q96KF7 97 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 HARBI1Q96MB7 349 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 CLCC1Q96S66 551 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 MRPL20Q9BYC9 149 aaKnown RBP7.96□□□□□ -1.14
SF3B3-207ENST00000566095 LYRM2Q9NU23 88 aaPredicted RBP7.96□□□□□ -1.14
SF3B3-207ENST00000566095 MED9Q9NWA0 146 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 FKBP11Q9NYL4 201 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 C1RLQ9NZP8 487 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 GSKIPQ9P0R6 139 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 KIAA1456Q9P272 454 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 HSPB7Q9UBY9 170 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 PITPNC1Q9UKF7 332 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 NUP50Q9UKX7 468 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 ZNF257Q9Y2Q1 563 aa7.96□□□□□ -1.14
SF3B3-207ENST00000566095 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.96□□□□□ -1.143e-11■■■■■ 42.3
SF3B3-207ENST00000566095 PRRC2AP48634 2157 aaKnown RBP7.95□□□□□ -1.14
SF3B3-207ENST00000566095 WNK2Q9Y3S1 2297 aa7.95□□□□□ -1.14
SF3B3-207ENST00000566095 MARCH11A6NNE9 402 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms