RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 PRAMEF5Q5TYX0 476 aa18.71■□□□□ 0.59
RCCD1-208ENST00000557266 OR13D1Q8NGV5 346 aa18.71■□□□□ 0.59
RCCD1-208ENST00000557266 LAMA5O15230 3695 aa18.7■□□□□ 0.58
RCCD1-208ENST00000557266 FAM90A9PA6NNJ1 464 aa18.7■□□□□ 0.58
RCCD1-208ENST00000557266 TMEM250H0YL14 139 aa18.7■□□□□ 0.58
RCCD1-208ENST00000557266 SPRY3O43610 288 aa18.7■□□□□ 0.58
RCCD1-208ENST00000557266 LHBP01229 141 aa18.7■□□□□ 0.58
RCCD1-208ENST00000557266 EDDM3BP56851 147 aa18.7■□□□□ 0.58
RCCD1-208ENST00000557266 KLF3P57682 345 aaPredicted RBP18.7■□□□□ 0.58
RCCD1-208ENST00000557266 NKX6-1P78426 367 aaPredicted RBP18.7■□□□□ 0.58
RCCD1-208ENST00000557266 UTF1Q5T230 341 aa18.7■□□□□ 0.58
RCCD1-208ENST00000557266 VKORC1L1Q8N0U8 176 aa18.7■□□□□ 0.58
RCCD1-208ENST00000557266 FAM216AQ8WUB2 273 aa18.7■□□□□ 0.58
RCCD1-208ENST00000557266 RPUSD4Q96CM3 377 aaKnown RBP18.7■□□□□ 0.58
RCCD1-208ENST00000557266 MANBALQ9NQG1 85 aa18.7■□□□□ 0.58
RCCD1-208ENST00000557266 CDX1P47902 265 aaPredicted RBP18.7■□□□□ 0.58
RCCD1-208ENST00000557266 ADIRFQ15847 76 aa18.7■□□□□ 0.58
RCCD1-208ENST00000557266 VHLLQ6RSH7 139 aa18.7■□□□□ 0.58
RCCD1-208ENST00000557266 SPNS3Q6ZMD2 512 aa18.7■□□□□ 0.58
RCCD1-208ENST00000557266 CTDSP1Q9GZU7 261 aa18.7■□□□□ 0.58
RCCD1-208ENST00000557266 WDR83OSQ9Y284 106 aa18.7■□□□□ 0.58
RCCD1-208ENST00000557266 CADP27708 2225 aa18.69■□□□□ 0.58
RCCD1-208ENST00000557266 C17orf112F2Z3M2 114 aa18.69■□□□□ 0.58
RCCD1-208ENST00000557266 SLC31A2O15432 143 aa18.69■□□□□ 0.58
RCCD1-208ENST00000557266 CRYAAP02489 173 aa18.69■□□□□ 0.58
RCCD1-208ENST00000557266 GLRXP35754 106 aa18.69■□□□□ 0.58
RCCD1-208ENST00000557266 TMEM241Q24JQ0 296 aa18.69■□□□□ 0.58
RCCD1-208ENST00000557266 ITLN1Q8WWA0 313 aa18.69■□□□□ 0.58
RCCD1-208ENST00000557266 CALYQ9NYX4 217 aa18.69■□□□□ 0.58
RCCD1-208ENST00000557266 RBFOX2O43251 390 aaKnown RBP eCLIP18.68■□□□□ 0.58
RCCD1-208ENST00000557266 OPN1MWP04001 364 aa18.68■□□□□ 0.58
RCCD1-208ENST00000557266 OPN1MW2P0DN77 364 aa18.68■□□□□ 0.58
RCCD1-208ENST00000557266 OPN1MW3P0DN78 364 aa18.68■□□□□ 0.58
RCCD1-208ENST00000557266 SELLP14151 372 aa18.68■□□□□ 0.58
RCCD1-208ENST00000557266 CD1BP29016 333 aa18.68■□□□□ 0.58
RCCD1-208ENST00000557266 SPCS3P61009 180 aa18.68■□□□□ 0.58
RCCD1-208ENST00000557266 FAM201AQ5SY85 155 aa18.68■□□□□ 0.58
RCCD1-208ENST00000557266 C1orf229Q6ZS94 237 aaPredicted RBP18.68■□□□□ 0.58
RCCD1-208ENST00000557266 PARLQ9H300 379 aa18.68■□□□□ 0.58
RCCD1-208ENST00000557266 GSN-AS1Q9NRJ2 163 aa18.68■□□□□ 0.58
RCCD1-208ENST00000557266 TRBV24-1A0A075B6N3 115 aa18.68■□□□□ 0.58
RCCD1-208ENST00000557266 FABP1P07148 127 aa18.68■□□□□ 0.58
RCCD1-208ENST00000557266 IGFL3Q6UXB1 125 aa18.68■□□□□ 0.58
RCCD1-208ENST00000557266 OR4A16Q8NH70 328 aa18.68■□□□□ 0.58
RCCD1-208ENST00000557266 DIRC2Q96SL1 478 aa18.68■□□□□ 0.58
RCCD1-208ENST00000557266 TRAV3A0A0B4J244 114 aa18.67■□□□□ 0.58
RCCD1-208ENST00000557266 CGB3P0DN86 165 aa18.67■□□□□ 0.58
RCCD1-208ENST00000557266 CGB7P0DN87 165 aa18.67■□□□□ 0.58
RCCD1-208ENST00000557266 OR4F5Q8NH21 305 aa18.67■□□□□ 0.58
RCCD1-208ENST00000557266 LEAP2Q969E1 77 aa18.67■□□□□ 0.58
RCCD1-208ENST00000557266 OR4F4Q96R69 305 aa18.67■□□□□ 0.58
RCCD1-208ENST00000557266 AKAP13Q12802 2813 aa18.67■□□□□ 0.58
RCCD1-208ENST00000557266 IGLV3-9A0A075B6K5 115 aa18.67■□□□□ 0.58
RCCD1-208ENST00000557266 VDAC2P45880 294 aaPredicted RBP18.67■□□□□ 0.58
RCCD1-208ENST00000557266 RPL23P62829 140 aaKnown RBP18.67■□□□□ 0.58
RCCD1-208ENST00000557266 RELBQ01201 579 aa18.67■□□□□ 0.58
RCCD1-208ENST00000557266 ACOT6Q3I5F7 207 aaPredicted RBP18.67■□□□□ 0.58
RCCD1-208ENST00000557266 GCSAMLQ5JQS6 135 aa18.67■□□□□ 0.58
RCCD1-208ENST00000557266 OR52E5Q8NH55 327 aa18.67■□□□□ 0.58
RCCD1-208ENST00000557266 ABHD5Q8WTS1 349 aa18.67■□□□□ 0.58
RCCD1-208ENST00000557266 FRZBQ92765 325 aa18.67■□□□□ 0.58
RCCD1-208ENST00000557266 S1PR3Q99500 378 aa18.67■□□□□ 0.58
RCCD1-208ENST00000557266 PHOX2AO14813 284 aa18.66■□□□□ 0.58
RCCD1-208ENST00000557266 PAGE4O60829 102 aa18.66■□□□□ 0.58
RCCD1-208ENST00000557266 CDC34P49427 236 aaPredicted RBP18.66■□□□□ 0.58
RCCD1-208ENST00000557266 C17orf58Q2M2W7 97 aa18.66■□□□□ 0.58
RCCD1-208ENST00000557266 PDLIM3Q53GG5 364 aaPredicted RBP18.66■□□□□ 0.58
RCCD1-208ENST00000557266 C16orf82Q7Z2V1 217 aa18.66■□□□□ 0.58
RCCD1-208ENST00000557266 DDB2Q92466 427 aa18.66■□□□□ 0.58
RCCD1-208ENST00000557266 SEC14L6B5MCN3 397 aa18.65■□□□□ 0.58
RCCD1-208ENST00000557266 RRHO14718 337 aa18.65■□□□□ 0.58
RCCD1-208ENST00000557266 LY86O95711 162 aa18.65■□□□□ 0.58
RCCD1-208ENST00000557266 IFNA10P01566 189 aa18.65■□□□□ 0.58
RCCD1-208ENST00000557266 ERVK-16P61578 105 aa18.65■□□□□ 0.58
RCCD1-208ENST00000557266 BSXQ3C1V8 233 aa18.65■□□□□ 0.58
RCCD1-208ENST00000557266 DUX4L9Q6RFH8 374 aaPredicted RBP18.65■□□□□ 0.58
RCCD1-208ENST00000557266 TMEM140Q9NV12 185 aa18.65■□□□□ 0.58
RCCD1-208ENST00000557266 LINC00587B1AMM8 73 aa18.65■□□□□ 0.58
RCCD1-208ENST00000557266 PRSS46E5RG02 174 aa18.65■□□□□ 0.58
RCCD1-208ENST00000557266 NDUFS6O75380 124 aaKnown RBP18.65■□□□□ 0.58
RCCD1-208ENST00000557266 TRGC1P0CF51 173 aa18.65■□□□□ 0.58
RCCD1-208ENST00000557266 C3orf36Q3SXR2 165 aa18.65■□□□□ 0.58
RCCD1-208ENST00000557266 C1orf185Q5T7R7 199 aa18.65■□□□□ 0.58
RCCD1-208ENST00000557266 Q6ZS92 163 aa18.65■□□□□ 0.58
RCCD1-208ENST00000557266 OR51M1Q9H341 326 aa18.65■□□□□ 0.58
RCCD1-208ENST00000557266 MIOXQ9UGB7 285 aa18.65■□□□□ 0.58
RCCD1-208ENST00000557266 GATA4P43694 442 aa18.64■□□□□ 0.57
RCCD1-208ENST00000557266 FAM222BQ8WU58 562 aa18.64■□□□□ 0.57
RCCD1-208ENST00000557266 TMEM170AQ8WVE7 144 aa18.64■□□□□ 0.57
RCCD1-208ENST00000557266 GGACTQ9BVM4 153 aa18.64■□□□□ 0.57
RCCD1-208ENST00000557266 HEYLQ9NQ87 328 aaPredicted RBP18.64■□□□□ 0.57
RCCD1-208ENST00000557266 TRAV38-1A0A0B4J264 116 aa18.64■□□□□ 0.57
RCCD1-208ENST00000557266 SMCO3A2RU48 225 aa18.64■□□□□ 0.57
RCCD1-208ENST00000557266 RPP30P78346 268 aaKnown RBP18.64■□□□□ 0.57
RCCD1-208ENST00000557266 CT45A1Q5HYN5 189 aa18.64■□□□□ 0.57
RCCD1-208ENST00000557266 GFI1BQ5VTD9 330 aa18.64■□□□□ 0.57
RCCD1-208ENST00000557266 CT45A3Q8NHU0 189 aa18.64■□□□□ 0.57
RCCD1-208ENST00000557266 TGOLN2O43493 480 aa18.63■□□□□ 0.57
RCCD1-208ENST00000557266 PFN1P07737 140 aaKnown RBP18.63■□□□□ 0.57
RCCD1-208ENST00000557266 KIR2DS2P43631 304 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms