RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 CLEC2DQ9UHP7 191 aa9.46□□□□□ -0.9
VPS29-211ENST00000553128 PNMA8CA0A1B0GUJ8 204 aa9.45□□□□□ -0.9
VPS29-211ENST00000553128 A0A1B0GW64 132 aa9.45□□□□□ -0.9
VPS29-211ENST00000553128 CRYZL1O95825 349 aa9.45□□□□□ -0.9
VPS29-211ENST00000553128 SAA1P0DJI8 122 aaPredicted RBP9.45□□□□□ -0.9
VPS29-211ENST00000553128 VMA21Q3ZAQ7 101 aa9.45□□□□□ -0.9
VPS29-211ENST00000553128 CCDC197Q8NCU1 140 aa9.45□□□□□ -0.9
VPS29-211ENST00000553128 OR11H2Q8NH07 326 aa9.45□□□□□ -0.9
VPS29-211ENST00000553128 SPIN2AQ99865 258 aa9.45□□□□□ -0.9
VPS29-211ENST00000553128 SPAG8Q99932 426 aaPredicted RBP9.45□□□□□ -0.9
VPS29-211ENST00000553128 SPIN2BQ9BPZ2 258 aa9.45□□□□□ -0.9
VPS29-211ENST00000553128 UQCC2Q9BRT2 126 aa9.45□□□□□ -0.9
VPS29-211ENST00000553128 TMEM59Q9BXS4 323 aa9.45□□□□□ -0.9
VPS29-211ENST00000553128 FGF20Q9NP95 211 aaPredicted RBP9.45□□□□□ -0.9
VPS29-211ENST00000553128 PLEKHJ1Q9NW61 149 aa9.45□□□□□ -0.9
VPS29-211ENST00000553128 RPL36Q9Y3U8 105 aaKnown RBP9.45□□□□□ -0.9
VPS29-211ENST00000553128 LINC00473A8K010 186 aa9.44□□□□□ -0.9
VPS29-211ENST00000553128 SOCS1O15524 211 aa9.44□□□□□ -0.9
VPS29-211ENST00000553128 IL6RP08887 468 aaPredicted RBP9.44□□□□□ -0.9
VPS29-211ENST00000553128 FCGR1AP12314 374 aa9.44□□□□□ -0.9
VPS29-211ENST00000553128 MED21Q13503 144 aa9.44□□□□□ -0.9
VPS29-211ENST00000553128 RTL8BQ17RB0 113 aa9.44□□□□□ -0.9
VPS29-211ENST00000553128 OR4A47Q6IF82 309 aa9.44□□□□□ -0.9
VPS29-211ENST00000553128 ZNF645Q8N7E2 425 aa9.44□□□□□ -0.9
VPS29-211ENST00000553128 GGHQ92820 318 aa9.44□□□□□ -0.9
VPS29-211ENST00000553128 GALNT14Q96FL9 552 aa9.44□□□□□ -0.9
VPS29-211ENST00000553128 Q96MT0 163 aa9.44□□□□□ -0.9
VPS29-211ENST00000553128 SLC29A1Q99808 456 aa9.44□□□□□ -0.9
VPS29-211ENST00000553128 TM2D1Q9BX74 207 aa9.44□□□□□ -0.9
VPS29-211ENST00000553128 C5orf66Q9H5L9 145 aa9.44□□□□□ -0.9
VPS29-211ENST00000553128 MRPL27Q9P0M9 148 aaKnown RBP9.44□□□□□ -0.9
VPS29-211ENST00000553128 GHRLQ9UBU3 117 aa9.44□□□□□ -0.9
VPS29-211ENST00000553128 ZNF257Q9Y2Q1 563 aa9.44□□□□□ -0.9
VPS29-211ENST00000553128 ORC6Q9Y5N6 252 aa9.44□□□□□ -0.9
VPS29-211ENST00000553128 DNAH5Q8TE73 4624 aa9.43□□□□□ -0.9
VPS29-211ENST00000553128 MFSD2BA6NFX1 497 aa9.43□□□□□ -0.9
VPS29-211ENST00000553128 TSPAN4O14817 238 aa9.43□□□□□ -0.9
VPS29-211ENST00000553128 CLEC3BP05452 202 aa9.43□□□□□ -0.9
VPS29-211ENST00000553128 AREGP15514 252 aa9.43□□□□□ -0.9
VPS29-211ENST00000553128 QRFPP83859 136 aa9.43□□□□□ -0.9
VPS29-211ENST00000553128 INSL4Q14641 139 aa9.43□□□□□ -0.9
VPS29-211ENST00000553128 TMPRSS11AQ6ZMR5 421 aa9.43□□□□□ -0.9
VPS29-211ENST00000553128 CD300LFQ8TDQ1 290 aa9.43□□□□□ -0.9
VPS29-211ENST00000553128 CSTL1Q9H114 145 aa9.43□□□□□ -0.9
VPS29-211ENST00000553128 IGHV4-4A0A075B6R2 117 aa9.42□□□□□ -0.9
VPS29-211ENST00000553128 WBP4O75554 376 aaKnown RBP9.42□□□□□ -0.9
VPS29-211ENST00000553128 RPA2P15927 270 aa9.42□□□□□ -0.9
VPS29-211ENST00000553128 DUTP33316 252 aaKnown RBP9.42□□□□□ -0.9
VPS29-211ENST00000553128 MAP2K4P45985 399 aa9.42□□□□□ -0.9
VPS29-211ENST00000553128 CBX3Q13185 183 aa9.42□□□□□ -0.9
VPS29-211ENST00000553128 CDK10Q15131 360 aa9.42□□□□□ -0.9
VPS29-211ENST00000553128 IGSF11Q5DX21 431 aa9.42□□□□□ -0.9
VPS29-211ENST00000553128 VKORC1L1Q8N0U8 176 aa9.42□□□□□ -0.9
VPS29-211ENST00000553128 NKAIN3Q8N8D7 197 aa9.42□□□□□ -0.9
VPS29-211ENST00000553128 ZNF485Q8NCK3 441 aa9.42□□□□□ -0.9
VPS29-211ENST00000553128 MARC2Q969Z3 335 aa9.42□□□□□ -0.9
VPS29-211ENST00000553128 EEF1AKMT3Q96AZ1 226 aa9.42□□□□□ -0.9
VPS29-211ENST00000553128 RIMS4Q9H426 269 aaPredicted RBP9.42□□□□□ -0.9
VPS29-211ENST00000553128 NPIPB5A8MRT5 1133 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 FOXI3A8MTJ6 420 aaPredicted RBP9.41□□□□□ -0.9
VPS29-211ENST00000553128 MPTX1A8MV57 137 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 TMEM14DPA8MWL7 114 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 TRDCB7Z8K6 153 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 BET1O15155 118 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 ACTL6BO94805 426 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 REG1AP05451 166 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 UBBP0CG47 229 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 RRASP10301 218 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 SRMP19623 302 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 DCKP27707 260 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 GPR183P32249 361 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 TMEM50BP56557 158 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 MED22Q15528 200 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 GLT8D1Q68CQ7 371 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 SLC25A42Q86VD7 318 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 MMD2Q8IY49 270 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 SETD9Q8NE22 299 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 FYTTD1Q96QD9 318 aaKnown RBP9.41□□□□□ -0.9
VPS29-211ENST00000553128 LPAR5Q9H1C0 372 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 C12orf4Q9NQ89 552 aa9.41□□□□□ -0.9
VPS29-211ENST00000553128 IGHV3OR16-8A0A075B7F1 116 aa9.4□□□□□ -0.9
VPS29-211ENST00000553128 CRYGCP07315 174 aa9.4□□□□□ -0.9
VPS29-211ENST00000553128 MYOD1P15172 320 aa9.4□□□□□ -0.9
VPS29-211ENST00000553128 GALP22466 123 aa9.4□□□□□ -0.9
VPS29-211ENST00000553128 C1orf100Q5SVJ3 147 aa9.4□□□□□ -0.9
VPS29-211ENST00000553128 Q6ZTC4 211 aa9.4□□□□□ -0.9
VPS29-211ENST00000553128 LRRTM1Q86UE6 522 aa9.4□□□□□ -0.9
VPS29-211ENST00000553128 CBR4Q8N4T8 237 aa9.4□□□□□ -0.9
VPS29-211ENST00000553128 MAPKAPK5-AS1Q8N8E1 139 aa9.4□□□□□ -0.9
VPS29-211ENST00000553128 OR6M1Q8NGM8 313 aa9.4□□□□□ -0.9
VPS29-211ENST00000553128 OR4A5Q8NH83 315 aa9.4□□□□□ -0.9
VPS29-211ENST00000553128 OSR1Q8TAX0 266 aaPredicted RBP9.4□□□□□ -0.9
VPS29-211ENST00000553128 SLC2A9Q9NRM0 540 aa9.4□□□□□ -0.9
VPS29-211ENST00000553128 MGAT4AQ9UM21 535 aa9.4□□□□□ -0.9
VPS29-211ENST00000553128 UFC1Q9Y3C8 167 aa9.4□□□□□ -0.9
VPS29-211ENST00000553128 IGLV11-55A0A075B6I3 123 aa9.39□□□□□ -0.91
VPS29-211ENST00000553128 DPPA5A6NC42 116 aa9.39□□□□□ -0.91
VPS29-211ENST00000553128 C11orf94C9JXX5 98 aa9.39□□□□□ -0.91
VPS29-211ENST00000553128 CTSDP07339 412 aaPredicted RBP9.39□□□□□ -0.91
VPS29-211ENST00000553128 ZNF735P0CB33 412 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms