RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 EXOSC2Q13868 293 aaKnown RBP8.72□□□□□ -1.01
PRPF40B-212ENST00000551111 TRAM1Q15629 374 aa8.72□□□□□ -1.01
PRPF40B-212ENST00000551111 RTL8BQ17RB0 113 aa8.72□□□□□ -1.01
PRPF40B-212ENST00000551111 USMG5Q96IX5 58 aa8.72□□□□□ -1.01
PRPF40B-212ENST00000551111 TMEM68Q96MH6 324 aa8.72□□□□□ -1.01
PRPF40B-212ENST00000551111 SIGLEC8Q9NYZ4 499 aa8.72□□□□□ -1.01
PRPF40B-212ENST00000551111 RBM7Q9Y580 266 aaKnown RBP8.72□□□□□ -1.01
PRPF40B-212ENST00000551111 S4R3C0 116 aa8.72□□□□□ -1.01
PRPF40B-212ENST00000551111 IFITM5A6NNB3 132 aa8.71□□□□□ -1.02
PRPF40B-212ENST00000551111 FCGR3BO75015 233 aa8.71□□□□□ -1.02
PRPF40B-212ENST00000551111 OR2J3O76001 311 aa8.71□□□□□ -1.02
PRPF40B-212ENST00000551111 OR2A4O95047 310 aa8.71□□□□□ -1.02
PRPF40B-212ENST00000551111 IGHV3-23P01764 117 aa8.71□□□□□ -1.02
PRPF40B-212ENST00000551111 IL6RP08887 468 aaPredicted RBP8.71□□□□□ -1.02
PRPF40B-212ENST00000551111 MYOD1P15172 320 aa8.71□□□□□ -1.02
PRPF40B-212ENST00000551111 NFYAP23511 347 aaPredicted RBP8.71□□□□□ -1.02
PRPF40B-212ENST00000551111 CD81P60033 236 aa8.71□□□□□ -1.02
PRPF40B-212ENST00000551111 VMA21Q3ZAQ7 101 aa8.71□□□□□ -1.02
PRPF40B-212ENST00000551111 PRSS48Q7RTY5 328 aa8.71□□□□□ -1.02
PRPF40B-212ENST00000551111 Q8N402 240 aa8.71□□□□□ -1.02
PRPF40B-212ENST00000551111 CACNG8Q8WXS5 425 aa8.71□□□□□ -1.02
PRPF40B-212ENST00000551111 SNAPC3Q92966 411 aa8.71□□□□□ -1.02
PRPF40B-212ENST00000551111 GINS4Q9BRT9 223 aa8.71□□□□□ -1.02
PRPF40B-212ENST00000551111 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 TRAV1-2A0A0B4J238 106 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 TEX22C9J3V5 150 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 MPPED1O15442 326 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 OR2C1O95371 312 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 RRASP10301 218 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 PSMA1P25786 263 aaKnown RBP8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 MRPS15P82914 257 aaKnown RBP8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 ATP5G2Q06055 141 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 ARFRP1Q13795 201 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 DEFB114Q30KQ6 69 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 CDNFQ49AH0 187 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 LCN12Q6JVE5 192 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 Q6ZS49 121 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 GTSCR1Q86UQ5 136 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 TTC9CQ8N5M4 171 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 WDR89Q96FK6 387 aaPredicted RBP8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 NEURL2Q9BR09 285 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 ST6GALNAC5Q9BVH7 336 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 VCXQ9H320 206 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 ACOT13Q9NPJ3 140 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 CEPT1Q9Y6K0 416 aa8.7□□□□□ -1.02
PRPF40B-212ENST00000551111 C2orf70A6NJV1 201 aa8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 NDUFB8O95169 186 aa8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 DIRAS3O95661 229 aa8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 PTHLHP12272 177 aa8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 FOLR2P14207 255 aa8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 RAB6AP20340 208 aa8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 GADD45AP24522 165 aa8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 EIF4EBP1Q13541 118 aaPredicted RBP8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 CDK10Q15131 360 aa8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 TATDN3Q17R31 274 aa8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 C15orf32Q32M92 178 aa8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 C22orf42Q6IC83 251 aa8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 OSR1Q8TAX0 266 aaPredicted RBP8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 NUDCD2Q8WVJ2 157 aa8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 ADTRPQ96IZ2 230 aa8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 CCDC140Q96MF4 163 aa8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 FANCD2OSQ96PS1 177 aa8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 DCUN1D5Q9BTE7 237 aa8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 ATG5Q9H1Y0 275 aa8.69□□□□□ -1.02
PRPF40B-212ENST00000551111 TMEM235A6NFC5 223 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 CGB1A6NKQ9 187 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 FAM223BA6NKX1 122 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 SSX5O60225 188 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 TUSC2O75896 110 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 HLA-DQB1P01920 261 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 IFNA6P05013 189 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 AREGP15514 252 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 RAB3BP20337 219 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 TALDO1P37837 337 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 KIR2DS2P43631 304 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 PSMD7P51665 324 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 CBX3Q13185 183 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 TBCEQ15813 527 aaPredicted RBP8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 GUCA2BQ16661 112 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 KCTD9Q7L273 389 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 FAM223AQ8IWN6 122 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 MMD2Q8IY49 270 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 ZNF645Q8N7E2 425 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 NECAP1Q8NC96 275 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 SRD5A3Q9H8P0 318 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 NDUFB11Q9NX14 153 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 PEMTQ9UBM1 199 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 RBMX2Q9Y388 322 aaKnown RBP8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 OR2W1Q9Y3N9 320 aa8.68□□□□□ -1.02
PRPF40B-212ENST00000551111 FRAS1Q86XX4 4008 aa8.67□□□□□ -1.02
PRPF40B-212ENST00000551111 TRDV1A0A1B0GX56 115 aa8.67□□□□□ -1.02
PRPF40B-212ENST00000551111 OR11H12B2RN74 326 aa8.67□□□□□ -1.02
PRPF40B-212ENST00000551111 PDCD5O14737 125 aa8.67□□□□□ -1.02
PRPF40B-212ENST00000551111 REG1AP05451 166 aa8.67□□□□□ -1.02
PRPF40B-212ENST00000551111 CLEC19AQ6UXS0 136 aa8.67□□□□□ -1.02
PRPF40B-212ENST00000551111 SSX9Q7RTT3 188 aa8.67□□□□□ -1.02
PRPF40B-212ENST00000551111 ZNF367Q7RTV3 350 aa8.67□□□□□ -1.02
PRPF40B-212ENST00000551111 PUSL1Q8N0Z8 303 aaKnown RBP8.67□□□□□ -1.02
PRPF40B-212ENST00000551111 CNBD2Q96M20 576 aa8.67□□□□□ -1.02
PRPF40B-212ENST00000551111 FYTTD1Q96QD9 318 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms