RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 TEX13DA0A0J9YY54 714 aaPredicted RBP17.01■□□□□ 0.31
NEK3-202ENST00000550841 SRRM4A7MD48 611 aaKnown RBP17.01■□□□□ 0.31
NEK3-202ENST00000550841 PLA2G10O15496 165 aa17.01■□□□□ 0.31
NEK3-202ENST00000550841 LYRM1O43325 122 aa17.01■□□□□ 0.31
NEK3-202ENST00000550841 SLC25A17O43808 307 aa17.01■□□□□ 0.31
NEK3-202ENST00000550841 IGLV2-23P01705 113 aa17.01■□□□□ 0.31
NEK3-202ENST00000550841 HLA-DRB1P01911 266 aa17.01■□□□□ 0.31
NEK3-202ENST00000550841 VDAC2P45880 294 aaPredicted RBP17.01■□□□□ 0.31
NEK3-202ENST00000550841 COMPP49747 757 aaPredicted RBP17.01■□□□□ 0.31
NEK3-202ENST00000550841 TAS2R31P59538 309 aa17.01■□□□□ 0.31
NEK3-202ENST00000550841 TAF15Q92804 592 aaKnown RBP eCLIP17.01■□□□□ 0.31
NEK3-202ENST00000550841 C5orf66Q9H5L9 145 aa17.01■□□□□ 0.31
NEK3-202ENST00000550841 COMMD9Q9P000 198 aa17.01■□□□□ 0.31
NEK3-202ENST00000550841 KCNIP3Q9Y2W7 256 aa17.01■□□□□ 0.31
NEK3-202ENST00000550841 SIGLEC9Q9Y336 463 aa17.01■□□□□ 0.31
NEK3-202ENST00000550841 RNF114Q9Y508 228 aa17.01■□□□□ 0.31
NEK3-202ENST00000550841 C3orf85A0A1B0GTC6 90 aa17■□□□□ 0.31
NEK3-202ENST00000550841 CREBL2O60519 120 aaPredicted RBP17■□□□□ 0.31
NEK3-202ENST00000550841 RAMP3O60896 148 aa17■□□□□ 0.31
NEK3-202ENST00000550841 IGHG2P01859 326 aa17■□□□□ 0.31
NEK3-202ENST00000550841 SERPINE2P07093 398 aa17■□□□□ 0.31
NEK3-202ENST00000550841 RPA2P15927 270 aa17■□□□□ 0.31
NEK3-202ENST00000550841 NQO2P16083 231 aa17■□□□□ 0.31
NEK3-202ENST00000550841 MDKP21741 143 aaPredicted RBP17■□□□□ 0.31
NEK3-202ENST00000550841 LPAR6P43657 344 aa17■□□□□ 0.31
NEK3-202ENST00000550841 MZT2BQ6NZ67 158 aa17■□□□□ 0.31
NEK3-202ENST00000550841 SLC35E3Q7Z769 313 aa17■□□□□ 0.31
NEK3-202ENST00000550841 FOXRED2Q8IWF2 684 aa17■□□□□ 0.31
NEK3-202ENST00000550841 VSIG4Q9Y279 399 aa17■□□□□ 0.31
NEK3-202ENST00000550841 SH2D7A6NKC9 451 aaPredicted RBP16.99■□□□□ 0.31
NEK3-202ENST00000550841 H0Y980 276 aa16.99■□□□□ 0.31
NEK3-202ENST00000550841 CRYGBP07316 175 aa16.99■□□□□ 0.31
NEK3-202ENST00000550841 ERVK-16P61578 105 aa16.99■□□□□ 0.31
NEK3-202ENST00000550841 AWAT1Q58HT5 328 aa16.99■□□□□ 0.31
NEK3-202ENST00000550841 Q6ZS46 218 aa16.99■□□□□ 0.31
NEK3-202ENST00000550841 PPP1R27Q86WC6 154 aa16.99■□□□□ 0.31
NEK3-202ENST00000550841 SGPP2Q8IWX5 399 aa16.99■□□□□ 0.31
NEK3-202ENST00000550841 RHOVQ96L33 236 aa16.99■□□□□ 0.31
NEK3-202ENST00000550841 ATG12O94817 140 aa16.98■□□□□ 0.31
NEK3-202ENST00000550841 OR2A4O95047 310 aa16.98■□□□□ 0.31
NEK3-202ENST00000550841 NDUFB6O95139 128 aa16.98■□□□□ 0.31
NEK3-202ENST00000550841 VSIG10L2P0DP72 767 aa16.98■□□□□ 0.31
NEK3-202ENST00000550841 CCR6P51684 374 aa16.98■□□□□ 0.31
NEK3-202ENST00000550841 ZNF585BQ52M93 769 aa16.98■□□□□ 0.31
NEK3-202ENST00000550841 ZNF562Q6V9R5 426 aa16.98■□□□□ 0.31
NEK3-202ENST00000550841 C12orf54Q6X4T0 127 aa16.98■□□□□ 0.31
NEK3-202ENST00000550841 OR4A5Q8NH83 315 aa16.98■□□□□ 0.31
NEK3-202ENST00000550841 OR2A7Q96R45 310 aa16.98■□□□□ 0.31
NEK3-202ENST00000550841 TSC22D3Q99576 134 aa16.98■□□□□ 0.31
NEK3-202ENST00000550841 NAA60Q9H7X0 242 aa16.98■□□□□ 0.31
NEK3-202ENST00000550841 CRYM-AS1A6NIL9 109 aa16.97■□□□□ 0.31
NEK3-202ENST00000550841 AP4M1O00189 453 aa16.97■□□□□ 0.31
NEK3-202ENST00000550841 SAA1P0DJI8 122 aaPredicted RBP16.97■□□□□ 0.31
NEK3-202ENST00000550841 AKR1C4P17516 323 aa16.97■□□□□ 0.31
NEK3-202ENST00000550841 DHODHQ02127 395 aa16.97■□□□□ 0.31
NEK3-202ENST00000550841 ASAH1Q13510 395 aa16.97■□□□□ 0.31
NEK3-202ENST00000550841 POU2AF1Q16633 256 aa16.97■□□□□ 0.31
NEK3-202ENST00000550841 CADM3Q8N126 398 aa16.97■□□□□ 0.31
NEK3-202ENST00000550841 DMBX1Q8NFW5 382 aa16.97■□□□□ 0.31
NEK3-202ENST00000550841 CLCC1Q96S66 551 aa16.97■□□□□ 0.31
NEK3-202ENST00000550841 GON7Q9BXV9 100 aa16.97■□□□□ 0.31
NEK3-202ENST00000550841 SERTAD4Q9NUC0 356 aa16.97■□□□□ 0.31
NEK3-202ENST00000550841 S1PR2O95136 353 aa16.96■□□□□ 0.31
NEK3-202ENST00000550841 ANXA3P12429 323 aa16.96■□□□□ 0.31
NEK3-202ENST00000550841 DEFA1P59665 94 aa16.96■□□□□ 0.31
NEK3-202ENST00000550841 DEFA3P59666 94 aa16.96■□□□□ 0.31
NEK3-202ENST00000550841 CX3CL1P78423 397 aa16.96■□□□□ 0.31
NEK3-202ENST00000550841 TMEM128Q5BJH2 165 aa16.96■□□□□ 0.31
NEK3-202ENST00000550841 TMED4Q7Z7H5 227 aa16.96■□□□□ 0.31
NEK3-202ENST00000550841 MMD2Q8IY49 270 aa16.96■□□□□ 0.31
NEK3-202ENST00000550841 PUSL1Q8N0Z8 303 aaKnown RBP16.96■□□□□ 0.31
NEK3-202ENST00000550841 CENPSQ8N2Z9 138 aa16.96■□□□□ 0.31
NEK3-202ENST00000550841 ADAD2Q8NCV1 583 aaKnown RBP16.96■□□□□ 0.31
NEK3-202ENST00000550841 R3HDM4Q96D70 268 aa16.96■□□□□ 0.31
NEK3-202ENST00000550841 TP53RKQ96S44 253 aa16.96■□□□□ 0.31
NEK3-202ENST00000550841 OR51J1Q9H342 316 aa16.96■□□□□ 0.31
NEK3-202ENST00000550841 BET1LQ9NYM9 111 aa16.96■□□□□ 0.31
NEK3-202ENST00000550841 IGHV7-81A0A0B4J1V7 117 aa16.95■□□□□ 0.3
NEK3-202ENST00000550841 PIGBOS1A0A0B4J2F0 54 aa16.95■□□□□ 0.3
NEK3-202ENST00000550841 FCN1O00602 326 aa16.95■□□□□ 0.3
NEK3-202ENST00000550841 ACTL6BO94805 426 aa16.95■□□□□ 0.3
NEK3-202ENST00000550841 CNIH1O95406 144 aa16.95■□□□□ 0.3
NEK3-202ENST00000550841 BTCP35070 178 aa16.95■□□□□ 0.3
NEK3-202ENST00000550841 PROK1P58294 105 aa16.95■□□□□ 0.3
NEK3-202ENST00000550841 PRSS8Q16651 343 aa16.95■□□□□ 0.3
NEK3-202ENST00000550841 TRIM16LQ309B1 348 aa16.95■□□□□ 0.3
NEK3-202ENST00000550841 CENPVQ7Z7K6 275 aaPredicted RBP16.95■□□□□ 0.3
NEK3-202ENST00000550841 VKORC1L1Q8N0U8 176 aa16.95■□□□□ 0.3
NEK3-202ENST00000550841 CHPT1Q8WUD6 406 aa16.95■□□□□ 0.3
NEK3-202ENST00000550841 GALNT14Q96FL9 552 aa16.95■□□□□ 0.3
NEK3-202ENST00000550841 HSPB9Q9BQS6 159 aa16.95■□□□□ 0.3
NEK3-202ENST00000550841 FAM240BA0A1B0GVZ2 78 aa16.94■□□□□ 0.3
NEK3-202ENST00000550841 KBTBD11O94819 623 aa16.94■□□□□ 0.3
NEK3-202ENST00000550841 CA2P00918 260 aa16.94■□□□□ 0.3
NEK3-202ENST00000550841 KRASP01116 189 aa16.94■□□□□ 0.3
NEK3-202ENST00000550841 IGF1P05019 195 aa16.94■□□□□ 0.3
NEK3-202ENST00000550841 UCP1P25874 307 aa16.94■□□□□ 0.3
NEK3-202ENST00000550841 SLC6A1P30531 599 aa16.94■□□□□ 0.3
NEK3-202ENST00000550841 MAS1LP35410 378 aa16.94■□□□□ 0.3
NEK3-202ENST00000550841 UBE2MP61081 183 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms