RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 RPS4Y1P22090 263 aaKnown RBP2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 RPS3P23396 243 aaKnown RBP eCLIP2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 NPY1RP25929 384 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 DNAJB13P59910 316 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 KRTAP10-2P60368 255 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 MRPS21P82921 87 aaKnown RBP2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 BSPH1Q075Z2 132 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 SCGB2B2Q4G0G5 96 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 WDR59Q6PJI9 974 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 CROCCP2Q86T23 111 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 LINC01551Q86U37 167 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 Q8N976 141 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 ACOT12Q8WYK0 555 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 STARD4Q96DR4 205 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 VGLL1Q99990 258 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 ZNF580Q9UK33 172 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 CSAG2Q9Y5P2 127 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 ADGBQ8N7X0 1667 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 TRAV9-1A0A075B6T8 112 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 BORCS7-ASMTA0A0B4J1R7 106 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 IGKV1-12A0A0C4DH73 117 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 KLF18A0A0U1RQI7 1052 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 A0A1B0GX51 115 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 A0A1W2PP18 115 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 A6NDX4 124 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 BET1O15155 118 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 DLEU1O43261 78 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 IGKV1D-12P01611 117 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 IGHV1-8P0DP01 117 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 ELK1P19419 428 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 GABRA2P47869 451 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 POLR2HP52434 150 aaKnown RBP2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 PIGPP57054 158 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 HBA1P69905 142 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 HTR4Q13639 388 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 PCP2Q8IVA1 136 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 TMEM86AQ8N2M4 240 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 ZNF664Q8N3J9 261 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 ZNF283Q8N7M2 679 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 ZNF709Q8N972 641 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 Q8N9W7 124 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 FER1L6-AS1Q8NA97 138 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 TSTD1Q8NFU3 115 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 OR8A1Q8NGG7 326 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 OR4K13Q8NH42 304 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 SGMS2Q8NHU3 365 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 ZNF721Q8TF20 911 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 SLC7A6Q92536 515 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 TRIB3Q96RU7 358 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 SPIN2AQ99865 258 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 SPIN2BQ9BPZ2 258 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 SHANK2-AS3Q9BTD1 123 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 PLA2G12AQ9BZM1 189 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 C20orf27Q9GZN8 174 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 IFI27L2Q9H2X8 130 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 TVP23BQ9NYZ1 205 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 AK3Q9UIJ7 227 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 TRAPPC2LQ9UL33 140 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 AMMECR1Q9Y4X0 333 aaPredicted RBP2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 RBM7Q9Y580 266 aaKnown RBP2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 ZNF518AQ6AHZ1 1483 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 PIKFYVEQ9Y2I7 2098 aa2.77□□□□□ -1.97
RNU4-60P-201ENST00000517239 DICER1Q9UPY3 1922 aaKnown RBP2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 PLXND1Q9Y4D7 1925 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 IGSF9BQ9UPX0 1349 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 NUP210Q8TEM1 1887 aaPredicted RBP2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 IGKV2D-30A0A075B6S6 120 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 LOC102725191A0A1B0GVB3 256 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 OR5H14A6NHG9 310 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 BPY2O14599 106 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 LY6G6DO95868 133 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 HLA-DQA1P01909 254 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 DBIP07108 87 aaKnown RBP2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 ZNF705DP0CH99 300 aaPredicted RBP2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 SMIM10L2AP0DMW4 78 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 SMIM10L2BP0DMW5 78 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 S100PP25815 95 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 CA5AP35218 305 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 TGFBR1P36897 503 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 OPRK1P41145 380 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 LPAR6P43657 344 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 HOXC5Q00444 222 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 DHRS2Q13268 280 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 HIGD2BQ4VC39 106 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 TNFAIP8L3Q5GJ75 292 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 C9orf129Q5T035 196 aaKnown RBP2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 LYRM7Q5U5X0 104 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 Q6Q795 121 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 C12orf45Q8N5I9 185 aaPredicted RBP2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 OR5W2Q8NH69 310 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 TYMSOSQ8TAI1 123 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 CANT1Q8WVQ1 401 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 ITLN2Q8WWU7 325 aaPredicted RBP2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 C12orf57Q99622 126 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 OR2D2Q9H210 308 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 ZNF286AQ9HBT8 521 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 TICRRQ7Z2Z1 1910 aa2.76□□□□□ -1.97
RNU4-60P-201ENST00000517239 ECM29Q5VYK3 1845 aa2.75□□□□□ -1.97
RNU4-60P-201ENST00000517239 EIF4G3O43432 1585 aaKnown RBP2.75□□□□□ -1.97
RNU4-60P-201ENST00000517239 PCNX3Q9H6A9 2034 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms