RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 TMEM256Q8N2U0 113 aa20.39■□□□□ 0.85
DDX41-202ENST00000503078 OR13A1Q8NGR1 328 aa20.39■□□□□ 0.85
DDX41-202ENST00000503078 KLF14Q8TD94 323 aaPredicted RBP20.39■□□□□ 0.85
DDX41-202ENST00000503078 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.38■□□□□ 0.85
DDX41-202ENST00000503078 MDFIC2A0A1B0GVS7 189 aa20.38■□□□□ 0.85
DDX41-202ENST00000503078 DEFB108AA8MXU0 73 aa20.38■□□□□ 0.85
DDX41-202ENST00000503078 IFNL4K9M1U5 179 aa20.38■□□□□ 0.85
DDX41-202ENST00000503078 RBFOX2O43251 390 aaKnown RBP eCLIP20.38■□□□□ 0.856e-7■■■■□ 21.9
DDX41-202ENST00000503078 OPRK1P41145 380 aa20.38■□□□□ 0.85
DDX41-202ENST00000503078 SOX8P57073 446 aa20.38■□□□□ 0.85
DDX41-202ENST00000503078 AARDQ4LEZ3 155 aa20.38■□□□□ 0.85
DDX41-202ENST00000503078 TPRX1Q8N7U7 411 aa20.38■□□□□ 0.85
DDX41-202ENST00000503078 RFESDQ8TAC1 157 aa20.38■□□□□ 0.85
DDX41-202ENST00000503078 RPP30P78346 268 aaKnown RBP20.38■□□□□ 0.85
DDX41-202ENST00000503078 FOXF2Q12947 444 aa20.38■□□□□ 0.85
DDX41-202ENST00000503078 MDS2Q8NDY4 140 aa20.38■□□□□ 0.85
DDX41-202ENST00000503078 WDFY4Q6ZS81 3184 aa20.38■□□□□ 0.85
DDX41-202ENST00000503078 FAM186AA6NE01 2351 aa20.38■□□□□ 0.85
DDX41-202ENST00000503078 TCAPO15273 167 aa20.37■□□□□ 0.85
DDX41-202ENST00000503078 GCH1P30793 250 aa20.37■□□□□ 0.85
DDX41-202ENST00000503078 TGFBR3Q03167 851 aa20.37■□□□□ 0.85
DDX41-202ENST00000503078 NEU1Q99519 415 aa20.37■□□□□ 0.85
DDX41-202ENST00000503078 TRBV20OR9-2A0A075B6H5 130 aa20.37■□□□□ 0.85
DDX41-202ENST00000503078 C21orf140B9A014 251 aa20.37■□□□□ 0.85
DDX41-202ENST00000503078 ARL14EPLP0DKL9 152 aa20.37■□□□□ 0.85
DDX41-202ENST00000503078 IGHV1-2P23083 117 aa20.37■□□□□ 0.85
DDX41-202ENST00000503078 ERVFC1-1P60608 527 aa20.37■□□□□ 0.85
DDX41-202ENST00000503078 TRIP6Q15654 476 aaKnown RBP20.37■□□□□ 0.85
DDX41-202ENST00000503078 C1orf194Q5T5A4 169 aa20.37■□□□□ 0.85
DDX41-202ENST00000503078 TREML4Q6UXN2 200 aa20.37■□□□□ 0.85
DDX41-202ENST00000503078 SPRR3Q9UBC9 169 aa20.37■□□□□ 0.85
DDX41-202ENST00000503078 METRNQ9UJH8 293 aa20.37■□□□□ 0.85
DDX41-202ENST00000503078 CACNA1DQ01668 2161 aa20.37■□□□□ 0.85
DDX41-202ENST00000503078 A0A1B0GUS0 222 aa20.36■□□□□ 0.85
DDX41-202ENST00000503078 TNFSF15O95150 251 aa20.36■□□□□ 0.85
DDX41-202ENST00000503078 STAG3L2P0CL84 134 aa20.36■□□□□ 0.85
DDX41-202ENST00000503078 STAG3L3P0CL85 134 aa20.36■□□□□ 0.85
DDX41-202ENST00000503078 ZNF124Q15973 351 aa20.36■□□□□ 0.85
DDX41-202ENST00000503078 CXXC4Q9H2H0 198 aa20.36■□□□□ 0.85
DDX41-202ENST00000503078 NAGKQ9UJ70 344 aa20.36■□□□□ 0.85
DDX41-202ENST00000503078 NUPR1O60356 82 aa20.36■□□□□ 0.85
DDX41-202ENST00000503078 YPEL3P61236 119 aaPredicted RBP20.36■□□□□ 0.85
DDX41-202ENST00000503078 CHODLQ9H9P2 273 aa20.36■□□□□ 0.85
DDX41-202ENST00000503078 POLR3KQ9Y2Y1 108 aaPredicted RBP20.36■□□□□ 0.85
DDX41-202ENST00000503078 FAM90A9PA6NNJ1 464 aa20.35■□□□□ 0.85
DDX41-202ENST00000503078 KITLGP21583 273 aa20.35■□□□□ 0.85
DDX41-202ENST00000503078 DUTP33316 252 aaKnown RBP20.35■□□□□ 0.85
DDX41-202ENST00000503078 PDLIM3Q53GG5 364 aaPredicted RBP20.35■□□□□ 0.85
DDX41-202ENST00000503078 WDR82Q6UXN9 313 aa20.35■□□□□ 0.85
DDX41-202ENST00000503078 SDSLQ96GA7 329 aa20.35■□□□□ 0.85
DDX41-202ENST00000503078 MS4A10Q96PG2 267 aa20.35■□□□□ 0.85
DDX41-202ENST00000503078 PTPRBP23467 1997 aa20.35■□□□□ 0.85
DDX41-202ENST00000503078 TRGV5A0A0B4J1U4 118 aa20.35■□□□□ 0.85
DDX41-202ENST00000503078 SPINT2O43291 252 aa20.35■□□□□ 0.85
DDX41-202ENST00000503078 LYZL6O75951 148 aa20.35■□□□□ 0.85
DDX41-202ENST00000503078 CXorf1O96002 111 aa20.35■□□□□ 0.85
DDX41-202ENST00000503078 OR10J1P30954 320 aa20.35■□□□□ 0.85
DDX41-202ENST00000503078 ADMP35318 185 aa20.35■□□□□ 0.85
DDX41-202ENST00000503078 PRAMEF5Q5TYX0 476 aa20.35■□□□□ 0.85
DDX41-202ENST00000503078 PRAMEF6Q5VXH4 476 aa20.35■□□□□ 0.85
DDX41-202ENST00000503078 TCF23Q7RTU1 214 aa20.35■□□□□ 0.85
DDX41-202ENST00000503078 GMPPAQ96IJ6 420 aaPredicted RBP20.35■□□□□ 0.85
DDX41-202ENST00000503078 MGST2Q99735 147 aa20.35■□□□□ 0.85
DDX41-202ENST00000503078 SNHG12Q9BXW3 62 aa20.35■□□□□ 0.85
DDX41-202ENST00000503078 KIR2DL5BA0A0G2JN68 375 aa20.34■□□□□ 0.85
DDX41-202ENST00000503078 KIR2DL5BA0A0G2JPC4 375 aa20.34■□□□□ 0.85
DDX41-202ENST00000503078 FCGR3BO75015 233 aa20.34■□□□□ 0.85
DDX41-202ENST00000503078 HPRT1P00492 218 aa20.34■□□□□ 0.85
DDX41-202ENST00000503078 ADH4P08319 380 aa20.34■□□□□ 0.85
DDX41-202ENST00000503078 HTD2P86397 168 aa20.34■□□□□ 0.85
DDX41-202ENST00000503078 KIR2DL5AQ8N109 375 aa20.34■□□□□ 0.85
DDX41-202ENST00000503078 OR4A16Q8NH70 328 aa20.34■□□□□ 0.85
DDX41-202ENST00000503078 C15orf65H3BRN8 121 aa20.34■□□□□ 0.85
DDX41-202ENST00000503078 TIMP3P35625 211 aa20.34■□□□□ 0.85
DDX41-202ENST00000503078 GPR12P47775 334 aa20.34■□□□□ 0.85
DDX41-202ENST00000503078 INO80CQ6PI98 192 aaPredicted RBP20.34■□□□□ 0.85
DDX41-202ENST00000503078 GGTLC1Q9BX51 225 aa20.34■□□□□ 0.85
DDX41-202ENST00000503078 MS4A5Q9H3V2 200 aa20.34■□□□□ 0.85
DDX41-202ENST00000503078 HEYLQ9NQ87 328 aaPredicted RBP20.34■□□□□ 0.85
DDX41-202ENST00000503078 AHCTF1Q8WYP5 2266 aa20.33■□□□□ 0.85
DDX41-202ENST00000503078 SCO2A0A1W2PP80 73 aa20.33■□□□□ 0.85
DDX41-202ENST00000503078 RRHO14718 337 aa20.33■□□□□ 0.85
DDX41-202ENST00000503078 ZNF883P0CG24 379 aa20.33■□□□□ 0.85
DDX41-202ENST00000503078 TMPRSS3P57727 454 aa20.33■□□□□ 0.85
DDX41-202ENST00000503078 MIC13Q5XKP0 118 aa20.33■□□□□ 0.85
DDX41-202ENST00000503078 OR10G8Q8NGN5 311 aa20.33■□□□□ 0.85
DDX41-202ENST00000503078 CBLN4Q9NTU7 201 aa20.33■□□□□ 0.85
DDX41-202ENST00000503078 PRSS46E5RG02 174 aa20.32■□□□□ 0.84
DDX41-202ENST00000503078 PROP1O75360 226 aa20.32■□□□□ 0.84
DDX41-202ENST00000503078 VDAC2P45880 294 aaPredicted RBP20.32■□□□□ 0.84
DDX41-202ENST00000503078 TRAT1Q6PIZ9 186 aa20.32■□□□□ 0.84
DDX41-202ENST00000503078 OR52E5Q8NH55 327 aa20.32■□□□□ 0.84
DDX41-202ENST00000503078 OCC1Q8TAD7 63 aa20.32■□□□□ 0.84
DDX41-202ENST00000503078 TMEM204Q9BSN7 226 aa20.32■□□□□ 0.84
DDX41-202ENST00000503078 DCTN5Q9BTE1 182 aa20.32■□□□□ 0.84
DDX41-202ENST00000503078 MED13Q9UHV7 2174 aa20.32■□□□□ 0.84
DDX41-202ENST00000503078 A0A1W2PNU3 283 aaPredicted RBP20.32■□□□□ 0.84
DDX41-202ENST00000503078 CD46P15529 392 aa20.32■□□□□ 0.84
DDX41-202ENST00000503078 LTC4SQ16873 150 aa20.32■□□□□ 0.84
DDX41-202ENST00000503078 SMIM21Q3B7S5 101 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms