RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 BAK1Q16611 211 aa15.29■□□□□ 0.04
HDAC4-212ENST00000495497 MRGPRG-AS1Q2M3A8 158 aa15.29■□□□□ 0.04
HDAC4-212ENST00000495497 VMA21Q3ZAQ7 101 aa15.29■□□□□ 0.04
HDAC4-212ENST00000495497 TCTEX1D4Q5JR98 221 aa15.29■□□□□ 0.04
HDAC4-212ENST00000495497 TBC1D26Q86UD7 250 aa15.29■□□□□ 0.04
HDAC4-212ENST00000495497 PPP1R27Q86WC6 154 aa15.29■□□□□ 0.04
HDAC4-212ENST00000495497 TOMM5Q8N4H5 51 aa15.29■□□□□ 0.04
HDAC4-212ENST00000495497 MARCH1Q8TCQ1 289 aa15.29■□□□□ 0.04
HDAC4-212ENST00000495497 CHPT1Q8WUD6 406 aa15.29■□□□□ 0.04
HDAC4-212ENST00000495497 SDHCQ99643 169 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-212ENST00000495497 FAM103A1Q9BTL3 118 aaKnown RBP15.29■□□□□ 0.04
HDAC4-212ENST00000495497 WSB1Q9Y6I7 421 aa15.29■□□□□ 0.04
HDAC4-212ENST00000495497 TRRAPQ9Y4A5 3859 aa15.29■□□□□ 0.04
HDAC4-212ENST00000495497 G3V318 75 aa15.28■□□□□ 0.04
HDAC4-212ENST00000495497 ARPC1BO15143 372 aaKnown RBP15.28■□□□□ 0.04
HDAC4-212ENST00000495497 SSBP2P81877 361 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-212ENST00000495497 SSX9Q7RTT3 188 aa15.28■□□□□ 0.04
HDAC4-212ENST00000495497 CITED2Q99967 270 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-212ENST00000495497 HRASLSQ9HDD0 168 aa15.28■□□□□ 0.04
HDAC4-212ENST00000495497 MCUBQ9NWR8 336 aa15.28■□□□□ 0.04
HDAC4-212ENST00000495497 IGF1P05019 195 aa15.27■□□□□ 0.04
HDAC4-212ENST00000495497 EGR2P11161 476 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-212ENST00000495497 ZNF562Q6V9R5 426 aa15.27■□□□□ 0.04
HDAC4-212ENST00000495497 TEX45Q8NA69 505 aa15.27■□□□□ 0.04
HDAC4-212ENST00000495497 POC5Q8NA72 575 aa15.27■□□□□ 0.04
HDAC4-212ENST00000495497 OR13C8Q8NGS7 320 aa15.27■□□□□ 0.04
HDAC4-212ENST00000495497 ABHD5Q8WTS1 349 aa15.27■□□□□ 0.04
HDAC4-212ENST00000495497 SLC2A9Q9NRM0 540 aa15.27■□□□□ 0.04
HDAC4-212ENST00000495497 S1PR2O95136 353 aa15.26■□□□□ 0.03
HDAC4-212ENST00000495497 HPRT1P00492 218 aa15.26■□□□□ 0.03
HDAC4-212ENST00000495497 RPA2P15927 270 aa15.26■□□□□ 0.03
HDAC4-212ENST00000495497 VDAC1P21796 283 aa15.26■□□□□ 0.03
HDAC4-212ENST00000495497 F2RP25116 425 aa15.26■□□□□ 0.03
HDAC4-212ENST00000495497 LPAR6P43657 344 aa15.26■□□□□ 0.03
HDAC4-212ENST00000495497 PIGPP57054 158 aa15.26■□□□□ 0.03
HDAC4-212ENST00000495497 FXYD3Q14802 87 aa15.26■□□□□ 0.03
HDAC4-212ENST00000495497 ECSCRQ19T08 205 aa15.26■□□□□ 0.03
HDAC4-212ENST00000495497 ZNF57Q68EA5 555 aaPredicted RBP15.26■□□□□ 0.03
HDAC4-212ENST00000495497 GDPD1Q8N9F7 314 aa15.26■□□□□ 0.03
HDAC4-212ENST00000495497 PRRT1Q99946 306 aa15.26■□□□□ 0.03
HDAC4-212ENST00000495497 RBFOX2O43251 390 aaKnown RBP eCLIP15.25■□□□□ 0.03
HDAC4-212ENST00000495497 AP3S2P59780 193 aa15.25■□□□□ 0.03
HDAC4-212ENST00000495497 SLC35B1P78383 322 aa15.25■□□□□ 0.03
HDAC4-212ENST00000495497 CFHR3Q02985 330 aa15.25■□□□□ 0.03
HDAC4-212ENST00000495497 PRSS8Q16651 343 aa15.25■□□□□ 0.03
HDAC4-212ENST00000495497 NSUN5P1Q3KNT7 163 aa15.25■□□□□ 0.03
HDAC4-212ENST00000495497 ZNF585BQ52M93 769 aa15.25■□□□□ 0.03
HDAC4-212ENST00000495497 LCNL1Q6ZST4 164 aa15.25■□□□□ 0.03
HDAC4-212ENST00000495497 PUSL1Q8N0Z8 303 aaKnown RBP15.25■□□□□ 0.03
HDAC4-212ENST00000495497 OR4X2Q8NGF9 303 aa15.25■□□□□ 0.03
HDAC4-212ENST00000495497 GRPEL2Q8TAA5 225 aa15.25■□□□□ 0.03
HDAC4-212ENST00000495497 ZFAND1Q8TCF1 268 aa15.25■□□□□ 0.03
HDAC4-212ENST00000495497 ZNF486Q96H40 463 aaPredicted RBP15.25■□□□□ 0.03
HDAC4-212ENST00000495497 RHOVQ96L33 236 aa15.25■□□□□ 0.03
HDAC4-212ENST00000495497 ZNF430Q9H8G1 570 aaPredicted RBP15.25■□□□□ 0.03
HDAC4-212ENST00000495497 AKIP1Q9NQ31 210 aa15.25■□□□□ 0.03
HDAC4-212ENST00000495497 TRAV41A0A0B4J266 112 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 LINC00854A0A1B0GVQ3 168 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 A0A1W2PRX2 142 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 TCRBV4S1A1TA0A5B7 111 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 MPPED1O15442 326 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 CNIH1O95406 144 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 HRASP01112 189 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 CTSDP07339 412 aaPredicted RBP15.24■□□□□ 0.03
HDAC4-212ENST00000495497 S100GP29377 79 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 RND3P61587 244 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 CD83Q01151 205 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 ZNF45Q02386 682 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 TNXAQ16473 311 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 TRIQKQ629K1 86 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 CD300LFQ8TDQ1 290 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 ARPC1AQ92747 370 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 RTBDNQ9BSG5 229 aaPredicted RBP15.24■□□□□ 0.03
HDAC4-212ENST00000495497 SLC2A8Q9NY64 477 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 PTTG2Q9NZH5 202 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 SCP2D1Q9UJQ7 156 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 GPR132Q9UNW8 380 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 NUBP2Q9Y5Y2 271 aa15.24■□□□□ 0.03
HDAC4-212ENST00000495497 ADARB2-AS1A8MUL3 147 aa15.23■□□□□ 0.03
HDAC4-212ENST00000495497 KBTBD11O94819 623 aa15.23■□□□□ 0.03
HDAC4-212ENST00000495497 OR2A4O95047 310 aa15.23■□□□□ 0.03
HDAC4-212ENST00000495497 PPIFP30405 207 aaKnown RBP15.23■□□□□ 0.03
HDAC4-212ENST00000495497 TAS2R31P59538 309 aa15.23■□□□□ 0.03
HDAC4-212ENST00000495497 OR4A47Q6IF82 309 aa15.23■□□□□ 0.03
HDAC4-212ENST00000495497 LFNGQ8NES3 379 aa15.23■□□□□ 0.03
HDAC4-212ENST00000495497 SGMS2Q8NHU3 365 aa15.23■□□□□ 0.03
HDAC4-212ENST00000495497 R3HDM4Q96D70 268 aa15.23■□□□□ 0.03
HDAC4-212ENST00000495497 OR2A7Q96R45 310 aa15.23■□□□□ 0.03
HDAC4-212ENST00000495497 GON7Q9BXV9 100 aa15.23■□□□□ 0.03
HDAC4-212ENST00000495497 C5orf66Q9H5L9 145 aa15.23■□□□□ 0.03
HDAC4-212ENST00000495497 PLEKHA2Q9HB19 425 aa15.23■□□□□ 0.03
HDAC4-212ENST00000495497 COPZ2Q9P299 210 aa15.23■□□□□ 0.03
HDAC4-212ENST00000495497 TRAV3A0A0B4J244 114 aa15.22■□□□□ 0.03
HDAC4-212ENST00000495497 MYOD1P15172 320 aa15.22■□□□□ 0.03
HDAC4-212ENST00000495497 NQO2P16083 231 aa15.22■□□□□ 0.03
HDAC4-212ENST00000495497 FAUP35544 74 aaKnown RBP15.22■□□□□ 0.03
HDAC4-212ENST00000495497 INPP1P49441 399 aa15.22■□□□□ 0.03
HDAC4-212ENST00000495497 CRIP2P52943 208 aaPredicted RBP15.22■□□□□ 0.03
HDAC4-212ENST00000495497 C19orf54Q5BKX5 351 aa15.22■□□□□ 0.03
HDAC4-212ENST00000495497 KHDC1LQ5JSQ8 128 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms