RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 VSIG4Q9Y279 399 aa9.37□□□□□ -0.91
APTX-227ENST00000485479 IGHG2P01859 326 aa9.36□□□□□ -0.91
APTX-227ENST00000485479 OPN1MWP04001 364 aa9.36□□□□□ -0.91
APTX-227ENST00000485479 OPN1MW2P0DN77 364 aa9.36□□□□□ -0.91
APTX-227ENST00000485479 OPN1MW3P0DN78 364 aa9.36□□□□□ -0.91
APTX-227ENST00000485479 CD28P10747 220 aa9.36□□□□□ -0.91
APTX-227ENST00000485479 PTBP1P26599 531 aaKnown RBP eCLIP9.36□□□□□ -0.91
APTX-227ENST00000485479 ZNF45Q02386 682 aa9.36□□□□□ -0.91
APTX-227ENST00000485479 CATR1Q13166 79 aa9.36□□□□□ -0.91
APTX-227ENST00000485479 ECSCRQ19T08 205 aa9.36□□□□□ -0.91
APTX-227ENST00000485479 MRGPRG-AS1Q2M3A8 158 aa9.36□□□□□ -0.91
APTX-227ENST00000485479 ADAD2Q8NCV1 583 aaKnown RBP9.36□□□□□ -0.91
APTX-227ENST00000485479 OR8H1Q8NGG4 311 aa9.36□□□□□ -0.91
APTX-227ENST00000485479 GRPEL2Q8TAA5 225 aa9.36□□□□□ -0.91
APTX-227ENST00000485479 TP53RKQ96S44 253 aa9.36□□□□□ -0.91
APTX-227ENST00000485479 RTBDNQ9BSG5 229 aaPredicted RBP9.36□□□□□ -0.91
APTX-227ENST00000485479 TRAV3A0A0B4J244 114 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 A0A1W2PRX2 142 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 CX3CL1P78423 397 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 ZNF585BQ52M93 769 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 PPP1R27Q86WC6 154 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 ZBTB34Q8NCN2 500 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 TSNAXQ99598 290 aaKnown RBP9.35□□□□□ -0.91
APTX-227ENST00000485479 PRRT1Q99946 306 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 MMP24Q9Y5R2 645 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 ARPC1BO15143 372 aaKnown RBP9.35□□□□□ -0.91
APTX-227ENST00000485479 HLA-DRB1P01911 266 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 RRASP10301 218 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 F2RP25116 425 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 G6PCP35575 357 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 LPAR6P43657 344 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 UCP3P55916 312 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 IZUMO4Q1ZYL8 232 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 TMED4Q7Z7H5 227 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 CENPVQ7Z7K6 275 aaPredicted RBP9.35□□□□□ -0.91
APTX-227ENST00000485479 STPG2Q8N412 459 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 OR5AU1Q8NGC0 362 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 RHOVQ96L33 236 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 WNT10AQ9GZT5 417 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 ZNF430Q9H8G1 570 aaPredicted RBP9.35□□□□□ -0.91
APTX-227ENST00000485479 COPZ2Q9P299 210 aa9.35□□□□□ -0.91
APTX-227ENST00000485479 MPPED1O15442 326 aa9.34□□□□□ -0.91
APTX-227ENST00000485479 KRASP01116 189 aa9.34□□□□□ -0.91
APTX-227ENST00000485479 CRYGBP07316 175 aa9.34□□□□□ -0.91
APTX-227ENST00000485479 BTCP35070 178 aa9.34□□□□□ -0.91
APTX-227ENST00000485479 LGALS7P47929 136 aa9.34□□□□□ -0.91
APTX-227ENST00000485479 AP3S2P59780 193 aa9.34□□□□□ -0.91
APTX-227ENST00000485479 DEFA5Q01523 94 aa9.34□□□□□ -0.91
APTX-227ENST00000485479 TNXAQ16473 311 aa9.34□□□□□ -0.91
APTX-227ENST00000485479 TCTEX1D4Q5JR98 221 aa9.34□□□□□ -0.91
APTX-227ENST00000485479 KHDC1LQ5JSQ8 128 aa9.34□□□□□ -0.91
APTX-227ENST00000485479 POC5Q8NA72 575 aa9.34□□□□□ -0.91
APTX-227ENST00000485479 OSR1Q8TAX0 266 aaPredicted RBP9.34□□□□□ -0.91
APTX-227ENST00000485479 OR51J1Q9H342 316 aa9.34□□□□□ -0.91
APTX-227ENST00000485479 SCP2D1Q9UJQ7 156 aa9.34□□□□□ -0.91
APTX-227ENST00000485479 FLVCR2Q9UPI3 526 aa9.34□□□□□ -0.91
APTX-227ENST00000485479 NSG2Q9Y328 171 aa9.34□□□□□ -0.91
APTX-227ENST00000485479 VWFP04275 2813 aa9.34□□□□□ -0.91
APTX-227ENST00000485479 E7EUB6 86 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 PLA2G10O15496 165 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 IGKV1-39P01597 117 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 IGKV1D-39P04432 117 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 OR5AC1P0C628 307 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 EGR2P11161 476 aaPredicted RBP9.33□□□□□ -0.92
APTX-227ENST00000485479 AKR1C4P17516 323 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 CD40LGP29965 261 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 FAUP35544 74 aaKnown RBP9.33□□□□□ -0.92
APTX-227ENST00000485479 UBE2KP61086 200 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 FXYD3Q14802 87 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 MSMO1Q15800 293 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 VMA21Q3ZAQ7 101 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 OR4A47Q6IF82 309 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 LPCAT3Q6P1A2 487 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 FOXRED2Q8IWF2 684 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 LFNGQ8NES3 379 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 DMBX1Q8NFW5 382 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 SPATA3Q8NHX4 192 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 TMEM230Q96A57 120 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 CITED2Q99967 270 aaPredicted RBP9.33□□□□□ -0.92
APTX-227ENST00000485479 SLC2A8Q9NY64 477 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 GPR132Q9UNW8 380 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 C3orf85A0A1B0GTC6 90 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 A0A1B0GUS0 222 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 PSMB11A5LHX3 300 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 MARCH11A6NNE9 402 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 AP4M1O00189 453 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 KBTBD11O94819 623 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 SPDEFO95238 335 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 CNIH1O95406 144 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 CTSDP07339 412 aaPredicted RBP9.33□□□□□ -0.92
APTX-227ENST00000485479 IFITM3Q01628 133 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 C19orf35Q6ZS72 473 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 C18orf65Q6ZTR6 163 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 WIPF2Q8TF74 440 aaPredicted RBP9.33□□□□□ -0.92
APTX-227ENST00000485479 R3HDM4Q96D70 268 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 RNF5Q99942 180 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 CITED1Q99966 193 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 ZNF747Q9BV97 191 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 TMEM140Q9NV12 185 aa9.33□□□□□ -0.92
APTX-227ENST00000485479 C14orf166Q9Y224 244 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms