RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 LOXL1Q08397 574 aaPredicted RBP23.31■■□□□ 1.32
VEGFA-211ENST00000476772 RHOVQ96L33 236 aa23.31■■□□□ 1.32
VEGFA-211ENST00000476772 Q96MF0 132 aa23.31■■□□□ 1.32
VEGFA-211ENST00000476772 MFFQ9GZY8 342 aa23.31■■□□□ 1.32
VEGFA-211ENST00000476772 TMEM140Q9NV12 185 aa23.31■■□□□ 1.32
VEGFA-211ENST00000476772 L7N2F9 121 aa23.3■■□□□ 1.32
VEGFA-211ENST00000476772 HRASP01112 189 aa23.3■■□□□ 1.32
VEGFA-211ENST00000476772 CEACAM3P40198 252 aa23.3■■□□□ 1.32
VEGFA-211ENST00000476772 UBE2E1P51965 193 aa23.3■■□□□ 1.32
VEGFA-211ENST00000476772 MOB3BQ86TA1 216 aa23.3■■□□□ 1.32
VEGFA-211ENST00000476772 MAPK1IP1LQ8NDC0 245 aa23.3■■□□□ 1.32
VEGFA-211ENST00000476772 REG4Q9BYZ8 158 aa23.3■■□□□ 1.32
VEGFA-211ENST00000476772 NSG2Q9Y328 171 aa23.3■■□□□ 1.32
VEGFA-211ENST00000476772 A0A1W2PPI3 338 aa23.29■■□□□ 1.32
VEGFA-211ENST00000476772 RNF222A6NCQ9 220 aa23.29■■□□□ 1.32
VEGFA-211ENST00000476772 SHOXO15266 292 aa23.29■■□□□ 1.32
VEGFA-211ENST00000476772 MC5RP33032 325 aa23.29■■□□□ 1.32
VEGFA-211ENST00000476772 RAB13P51153 203 aa23.29■■□□□ 1.32
VEGFA-211ENST00000476772 AP2S1P53680 142 aaPredicted RBP23.29■■□□□ 1.32
VEGFA-211ENST00000476772 POU2AF1Q16633 256 aa23.29■■□□□ 1.32
VEGFA-211ENST00000476772 TMEM177Q53S58 311 aa23.29■■□□□ 1.32
VEGFA-211ENST00000476772 OSR1Q8TAX0 266 aaPredicted RBP23.29■■□□□ 1.32
VEGFA-211ENST00000476772 FLYWCH2Q96CP2 140 aaKnown RBP23.29■■□□□ 1.32
VEGFA-211ENST00000476772 HILPDAQ9Y5L2 63 aa23.29■■□□□ 1.32
VEGFA-211ENST00000476772 SRRM4A7MD48 611 aaKnown RBP23.28■■□□□ 1.32
VEGFA-211ENST00000476772 HARBI1Q96MB7 349 aa23.28■■□□□ 1.32
VEGFA-211ENST00000476772 CTNNBIP1Q9NSA3 81 aaPredicted RBP23.28■■□□□ 1.32
VEGFA-211ENST00000476772 SSSCA1O60232 199 aa23.28■■□□□ 1.32
VEGFA-211ENST00000476772 LGALS4P56470 323 aa23.28■■□□□ 1.32
VEGFA-211ENST00000476772 OR4A47Q6IF82 309 aa23.28■■□□□ 1.32
VEGFA-211ENST00000476772 OR4C13Q8NGP0 309 aa23.28■■□□□ 1.32
VEGFA-211ENST00000476772 FAM90A9PA6NNJ1 464 aa23.27■■□□□ 1.32
VEGFA-211ENST00000476772 MINOS1Q5TGZ0 78 aa23.27■■□□□ 1.32
VEGFA-211ENST00000476772 LINC01356Q8N9X3 169 aa23.27■■□□□ 1.32
VEGFA-211ENST00000476772 INO80EQ8NBZ0 244 aaPredicted RBP23.27■■□□□ 1.32
VEGFA-211ENST00000476772 C11orf1Q9H5F2 150 aa23.27■■□□□ 1.32
VEGFA-211ENST00000476772 HIF1ANQ9NWT6 349 aa23.27■■□□□ 1.32
VEGFA-211ENST00000476772 MINOS1-NBL1R4GNA1 71 aa23.27■■□□□ 1.32
VEGFA-211ENST00000476772 TRAV3A0A0B4J244 114 aa23.26■■□□□ 1.31
VEGFA-211ENST00000476772 TRAV20A0A0B4J274 112 aa23.26■■□□□ 1.31
VEGFA-211ENST00000476772 MSGN1A6NI15 193 aa23.26■■□□□ 1.31
VEGFA-211ENST00000476772 E5RGE8 158 aa23.26■■□□□ 1.31
VEGFA-211ENST00000476772 RBMXL2O75526 392 aaKnown RBP23.26■■□□□ 1.31
VEGFA-211ENST00000476772 PAX6P26367 422 aa23.26■■□□□ 1.31
VEGFA-211ENST00000476772 OR2B8PP59922 312 aa23.26■■□□□ 1.31
VEGFA-211ENST00000476772 ACOT7LQ6ZUV0 252 aa23.26■■□□□ 1.31
VEGFA-211ENST00000476772 FASNP49327 2511 aaKnown RBP23.26■■□□□ 1.31
VEGFA-211ENST00000476772 WRBO00258 174 aa23.25■■□□□ 1.31
VEGFA-211ENST00000476772 SNAPC5O75971 98 aa23.25■■□□□ 1.31
VEGFA-211ENST00000476772 RPS16P62249 146 aaKnown RBP23.25■■□□□ 1.31
VEGFA-211ENST00000476772 TMUB2Q71RG4 321 aa23.25■■□□□ 1.31
VEGFA-211ENST00000476772 C17orf50Q8WW18 174 aa23.25■■□□□ 1.31
VEGFA-211ENST00000476772 TBL2Q9Y4P3 447 aaKnown RBP23.25■■□□□ 1.31
VEGFA-211ENST00000476772 AUP1Q9Y679 476 aa23.25■■□□□ 1.31
VEGFA-211ENST00000476772 CENPVL3A0A0U1RRI6 287 aa23.25■■□□□ 1.31
VEGFA-211ENST00000476772 TIMM23O14925 209 aa23.25■■□□□ 1.31
VEGFA-211ENST00000476772 OR2F2O95006 317 aa23.25■■□□□ 1.31
VEGFA-211ENST00000476772 ARHGDIBP52566 201 aa23.25■■□□□ 1.31
VEGFA-211ENST00000476772 RELBQ01201 579 aa23.25■■□□□ 1.31
VEGFA-211ENST00000476772 OR2F1Q13607 317 aa23.25■■□□□ 1.31
VEGFA-211ENST00000476772 ZNF345Q14585 488 aa23.25■■□□□ 1.31
VEGFA-211ENST00000476772 OR8H3Q8N146 312 aa23.25■■□□□ 1.31
VEGFA-211ENST00000476772 DYNAPQ8N1N2 210 aa23.25■■□□□ 1.31
VEGFA-211ENST00000476772 QTRT1Q9BXR0 403 aaKnown RBP23.25■■□□□ 1.31
VEGFA-211ENST00000476772 MS4A7Q9GZW8 240 aaPredicted RBP23.25■■□□□ 1.31
VEGFA-211ENST00000476772 CR1P17927 2039 aa23.24■■□□□ 1.31
VEGFA-211ENST00000476772 FAM90A26D6RGX4 464 aa23.24■■□□□ 1.31
VEGFA-211ENST00000476772 CHST1O43916 411 aa23.24■■□□□ 1.31
VEGFA-211ENST00000476772 SAA1P0DJI8 122 aaPredicted RBP23.24■■□□□ 1.31
VEGFA-211ENST00000476772 TNFRSF9Q07011 255 aa23.24■■□□□ 1.31
VEGFA-211ENST00000476772 SSX2Q16385 188 aa23.24■■□□□ 1.31
VEGFA-211ENST00000476772 OR4A16Q8NH70 328 aa23.24■■□□□ 1.31
VEGFA-211ENST00000476772 RITA1Q96K30 269 aa23.24■■□□□ 1.31
VEGFA-211ENST00000476772 AIFM2Q9BRQ8 373 aa23.24■■□□□ 1.31
VEGFA-211ENST00000476772 ARL6Q9H0F7 186 aa23.24■■□□□ 1.31
VEGFA-211ENST00000476772 HSPB7Q9UBY9 170 aa23.24■■□□□ 1.31
VEGFA-211ENST00000476772 TSC22D2O75157 780 aa23.23■■□□□ 1.31
VEGFA-211ENST00000476772 S100A11P31949 105 aa23.23■■□□□ 1.31
VEGFA-211ENST00000476772 KCNRGQ8N5I3 272 aa23.23■■□□□ 1.31
VEGFA-211ENST00000476772 AQP10Q96PS8 301 aa23.23■■□□□ 1.31
VEGFA-211ENST00000476772 C7orf69Q9H7B7 122 aa23.23■■□□□ 1.31
VEGFA-211ENST00000476772 A0A0D9SG52 128 aa23.22■■□□□ 1.31
VEGFA-211ENST00000476772 SYNGR2O43760 224 aa23.22■■□□□ 1.31
VEGFA-211ENST00000476772 HKR1P10072 659 aa23.22■■□□□ 1.31
VEGFA-211ENST00000476772 PVALBP20472 110 aaPredicted RBP23.22■■□□□ 1.31
VEGFA-211ENST00000476772 SAA4P35542 130 aa23.22■■□□□ 1.31
VEGFA-211ENST00000476772 NUP62P37198 522 aaPredicted RBP23.22■■□□□ 1.31
VEGFA-211ENST00000476772 CFHR4Q92496 578 aa23.22■■□□□ 1.31
VEGFA-211ENST00000476772 NPFFO15130 113 aa23.22■■□□□ 1.31
VEGFA-211ENST00000476772 TMEM50AO95807 157 aa23.22■■□□□ 1.31
VEGFA-211ENST00000476772 IGLV2-23P01705 113 aa23.22■■□□□ 1.31
VEGFA-211ENST00000476772 IL6RP08887 468 aaPredicted RBP23.22■■□□□ 1.31
VEGFA-211ENST00000476772 P2RY1P47900 373 aa23.22■■□□□ 1.31
VEGFA-211ENST00000476772 VAMP2P63027 116 aa23.22■■□□□ 1.31
VEGFA-211ENST00000476772 OPCMLQ14982 345 aa23.22■■□□□ 1.31
VEGFA-211ENST00000476772 AARDQ4LEZ3 155 aa23.22■■□□□ 1.31
VEGFA-211ENST00000476772 PUSL1Q8N0Z8 303 aaKnown RBP23.22■■□□□ 1.31
VEGFA-211ENST00000476772 RBKSQ9H477 322 aa23.22■■□□□ 1.31
VEGFA-211ENST00000476772 BET1LQ9NYM9 111 aa23.22■■□□□ 1.31
VEGFA-211ENST00000476772 TRAV40A0A0B4J280 105 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms