RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 LRRC74AQ0VAA2 488 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 NAB1Q13506 487 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 DEFB116Q30KQ4 102 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 DEFB114Q30KQ6 69 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 STUMQ69YW2 141 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 SMARCD3Q6STE5 483 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 COMMD6Q7Z4G1 85 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 LINC01551Q86U37 167 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 PCP2Q8IVA1 136 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 FAM86B1Q8N7N1 296 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 OR10G2Q8NGC3 310 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 OR4P4Q8NGL7 312 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 ZNF502Q8TBZ5 544 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 ACTL9Q8TC94 416 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 CASTOR1Q8WTX7 329 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 PKNOX2Q96KN3 472 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 SERPINI1Q99574 410 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 HSPB9Q9BQS6 159 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 CHAC1Q9BUX1 264 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 KRTAP2-1Q9BYU5 128 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 PKIBQ9C010 78 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 VCXQ9H320 206 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 ZC4H2Q9NQZ6 224 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 TUBG2Q9NRH3 451 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 ZNF586Q9NXT0 402 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 RWDD2AQ9UIY3 292 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 RAB26Q9ULW5 256 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 PSG8Q9UQ74 426 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 ST3GAL6Q9Y274 331 aa2.3□□□□□ -2.04
VPS13A-210ENST00000471439 hCG_1818297A0A087WSY0 165 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 A0A0B4J2A0 478 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 A0A0J9YXV3 536 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 GGT3PA6NGU5 568 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 C17orf98A8MV24 154 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 IQCF6A8MYZ5 107 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 FTCDNL1E5RQL4 147 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 INS-IGF2F8WCM5 200 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 G3V318 75 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 APOC4-APOC2K7ER74 178 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 MRPS12O15235 138 aaKnown RBP2.29□□□□□ -2.04
VPS13A-210ENST00000471439 SOCS1O15524 211 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 OR2J3O76001 311 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 APOC2P02655 101 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 SCTP09683 121 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 CSNK1A1P48729 337 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 MNAT1P51948 309 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 ZNF138P52744 262 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 RPL31P62899 125 aaKnown RBP2.29□□□□□ -2.04
VPS13A-210ENST00000471439 MT1HP80294 61 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 SLAQ13239 276 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 USF2Q15853 346 aaPredicted RBP2.29□□□□□ -2.04
VPS13A-210ENST00000471439 POU2AF1Q16633 256 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 RIMKLAQ8IXN7 391 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 CYB561D1Q8N8Q1 229 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 OR56B2PQ8NGI1 322 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 RHEBL1Q8TAI7 183 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 LRRC29Q8WV35 223 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 DCAKDQ8WVC6 231 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 SLC7A6Q92536 515 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 CDS1Q92903 461 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 FAM3DQ96BQ1 224 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 KIFC1Q9BW19 673 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 HAUS4Q9H6D7 363 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 CCNB1IP1Q9NPC3 277 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 C20orf96Q9NUD7 363 aaPredicted RBP2.29□□□□□ -2.04
VPS13A-210ENST00000471439 PTTG3PQ9NZH4 202 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 SHPKQ9UHJ6 478 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 LINC00588Q9Y4M8 146 aa2.29□□□□□ -2.04
VPS13A-210ENST00000471439 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 IGHV2-26A0A0B4J1V2 119 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 TRAV39A0A0B4J263 110 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 A0A1B0GVX0 72 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 H0YIV9 168 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 FABP3P05413 133 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 TFPTP0C1Z6 253 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 OR5H8P0DN80 308 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 RND2P52198 227 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 MXD1Q05195 221 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 MEF2CQ06413 473 aaPredicted RBP2.28□□□□□ -2.04
VPS13A-210ENST00000471439 PPP1R7Q15435 360 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 FAM83EQ2M2I3 478 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 TMEM69Q5SWH9 247 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 HES5Q5TA89 166 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 C1orf140Q5VVS0 124 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 LCN8Q6JVE9 175 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 NANOGP8Q6NSW7 305 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 FBXW12Q6X9E4 464 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 PP632Q6XCG6 107 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 EIF3MQ7L2H7 374 aaKnown RBP2.28□□□□□ -2.04
VPS13A-210ENST00000471439 LRRC8AQ8IWT6 810 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 C15orf56Q8N910 161 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 CIRBP-AS1Q8TBR5 109 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 ACMSDQ8TDX5 336 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 C12orf43Q96C57 262 aaKnown RBP2.28□□□□□ -2.04
VPS13A-210ENST00000471439 TEX37Q96LM6 180 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 CCDC115Q96NT0 180 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 PANX1Q96RD7 426 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 TXNIPQ9H3M7 391 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 GLTPQ9NZD2 209 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 AHSPQ9NZD4 102 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms