RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 LIN54Q6MZP7 749 aa15.07■□□□□ 0
USP11-205ENST00000467378 OR13C8Q8NGS7 320 aa15.07■□□□□ 0
USP11-205ENST00000467378 MARCH1Q8TCQ1 289 aa15.07■□□□□ 0
USP11-205ENST00000467378 DEDD2Q8WXF8 326 aa15.07■□□□□ 0
USP11-205ENST00000467378 PRRT1Q99946 306 aa15.07■□□□□ 0
USP11-205ENST00000467378 HSPB9Q9BQS6 159 aa15.07■□□□□ 0
USP11-205ENST00000467378 METTL1Q9UBP6 276 aaKnown RBP15.07■□□□□ 0
USP11-205ENST00000467378 NOTCH3Q9UM47 2321 aa15.06■□□□□ 0
USP11-205ENST00000467378 FCN1O00602 326 aa15.06■□□□□ 0
USP11-205ENST00000467378 HLA-DRB1P01911 266 aa15.06■□□□□ 0
USP11-205ENST00000467378 RLN1P04808 185 aa15.06■□□□□ 0
USP11-205ENST00000467378 PGAM2P15259 253 aa15.06■□□□□ 0
USP11-205ENST00000467378 PHLDA2Q53GA4 152 aa15.06■□□□□ 0
USP11-205ENST00000467378 SLC35E3Q7Z769 313 aa15.06■□□□□ 0
USP11-205ENST00000467378 SPAG16Q8N0X2 631 aa15.06■□□□□ 0
USP11-205ENST00000467378 OR51H1Q8NH63 302 aa15.06■□□□□ 0
USP11-205ENST00000467378 OR4S2Q8NH73 311 aa15.06■□□□□ 0
USP11-205ENST00000467378 WIPF2Q8TF74 440 aaPredicted RBP15.06■□□□□ 0
USP11-205ENST00000467378 ZNF486Q96H40 463 aaPredicted RBP15.06■□□□□ 0
USP11-205ENST00000467378 AURKAIP1Q9NWT8 199 aaPredicted RBP15.06■□□□□ 0
USP11-205ENST00000467378 RBFOX2O43251 390 aaKnown RBP eCLIP15.05■□□□□ -0
USP11-205ENST00000467378 SLC25A17O43808 307 aa15.05■□□□□ -0
USP11-205ENST00000467378 RAMP3O60896 148 aa15.05■□□□□ -0
USP11-205ENST00000467378 PI3P19957 117 aa15.05■□□□□ -0
USP11-205ENST00000467378 ECI1P42126 302 aa15.05■□□□□ -0
USP11-205ENST00000467378 RND3P61587 244 aa15.05■□□□□ -0
USP11-205ENST00000467378 OXLD1Q5BKU9 147 aa15.05■□□□□ -0
USP11-205ENST00000467378 ZNF57Q68EA5 555 aaPredicted RBP15.05■□□□□ -0
USP11-205ENST00000467378 C11orf87Q6NUJ2 197 aa15.05■□□□□ -0
USP11-205ENST00000467378 IDO2Q6ZQW0 420 aa15.05■□□□□ -0
USP11-205ENST00000467378 KLHDC1Q8N7A1 406 aa15.05■□□□□ -0
USP11-205ENST00000467378 ZFAND1Q8TCF1 268 aa15.05■□□□□ -0
USP11-205ENST00000467378 S100ZQ8WXG8 99 aa15.05■□□□□ -0
USP11-205ENST00000467378 SLC2A9Q9NRM0 540 aa15.05■□□□□ -0
USP11-205ENST00000467378 SCP2D1Q9UJQ7 156 aa15.05■□□□□ -0
USP11-205ENST00000467378 GPR132Q9UNW8 380 aa15.05■□□□□ -0
USP11-205ENST00000467378 IGHV7-81A0A0B4J1V7 117 aa15.04■□□□□ -0
USP11-205ENST00000467378 CTSDP07339 412 aaPredicted RBP15.04■□□□□ -0
USP11-205ENST00000467378 VSIG10L2P0DP72 767 aa15.04■□□□□ -0
USP11-205ENST00000467378 IL7P13232 177 aa15.04■□□□□ -0
USP11-205ENST00000467378 F2RP25116 425 aa15.04■□□□□ -0
USP11-205ENST00000467378 FAUP35544 74 aaKnown RBP15.04■□□□□ -0
USP11-205ENST00000467378 UBE2KP61086 200 aa15.04■□□□□ -0
USP11-205ENST00000467378 PLGLAQ15195 96 aa15.04■□□□□ -0
USP11-205ENST00000467378 SURF2Q15527 256 aaPredicted RBP15.04■□□□□ -0
USP11-205ENST00000467378 MRGPRG-AS1Q2M3A8 158 aa15.04■□□□□ -0
USP11-205ENST00000467378 TRIQKQ629K1 86 aa15.04■□□□□ -0
USP11-205ENST00000467378 TBC1D26Q86UD7 250 aa15.04■□□□□ -0
USP11-205ENST00000467378 TEX45Q8NA69 505 aa15.04■□□□□ -0
USP11-205ENST00000467378 TPSG1Q9NRR2 321 aa15.04■□□□□ -0
USP11-205ENST00000467378 MCUBQ9NWR8 336 aa15.04■□□□□ -0
USP11-205ENST00000467378 TENM3Q9P273 2699 aa15.03■□□□□ -0
USP11-205ENST00000467378 HPRT1P00492 218 aa15.03■□□□□ -0
USP11-205ENST00000467378 S100GP29377 79 aa15.03■□□□□ -0
USP11-205ENST00000467378 PPP1R27Q86WC6 154 aa15.03■□□□□ -0
USP11-205ENST00000467378 TCTEX1D1Q8N7M0 179 aa15.03■□□□□ -0
USP11-205ENST00000467378 CD300LFQ8TDQ1 290 aa15.03■□□□□ -0
USP11-205ENST00000467378 NOL4LQ96MY1 436 aaPredicted RBP15.03■□□□□ -0
USP11-205ENST00000467378 CLCC1Q96S66 551 aa15.03■□□□□ -0
USP11-205ENST00000467378 RTBDNQ9BSG5 229 aaPredicted RBP15.03■□□□□ -0
USP11-205ENST00000467378 LINC00527Q9UJ94 153 aa15.03■□□□□ -0
USP11-205ENST00000467378 MPPED1O15442 326 aa15.02■□□□□ -0
USP11-205ENST00000467378 INPP1P49441 399 aa15.02■□□□□ -0
USP11-205ENST00000467378 PIGPP57054 158 aa15.02■□□□□ -0
USP11-205ENST00000467378 CX3CL1P78423 397 aa15.02■□□□□ -0
USP11-205ENST00000467378 VMA21Q3ZAQ7 101 aa15.02■□□□□ -0
USP11-205ENST00000467378 ZNF585BQ52M93 769 aa15.02■□□□□ -0
USP11-205ENST00000467378 FOXRED2Q8IWF2 684 aa15.02■□□□□ -0
USP11-205ENST00000467378 POC5Q8NA72 575 aa15.02■□□□□ -0
USP11-205ENST00000467378 OR51J1Q9H342 316 aa15.02■□□□□ -0
USP11-205ENST00000467378 C5orf66Q9H5L9 145 aa15.02■□□□□ -0
USP11-205ENST00000467378 PLEKHA2Q9HB19 425 aa15.02■□□□□ -0
USP11-205ENST00000467378 FAM212BQ9NTI7 297 aaPredicted RBP15.02■□□□□ -0
USP11-205ENST00000467378 AP4M1O00189 453 aa15.01□□□□□ -0.01
USP11-205ENST00000467378 CA2P00918 260 aa15.01□□□□□ -0.01
USP11-205ENST00000467378 HRASP01112 189 aa15.01□□□□□ -0.01
USP11-205ENST00000467378 IGF1P05019 195 aa15.01□□□□□ -0.01
USP11-205ENST00000467378 SAA1P0DJI8 122 aaPredicted RBP15.01□□□□□ -0.01
USP11-205ENST00000467378 CD40LGP29965 261 aa15.01□□□□□ -0.01
USP11-205ENST00000467378 LPAR6P43657 344 aa15.01□□□□□ -0.01
USP11-205ENST00000467378 SSBP2P81877 361 aaPredicted RBP15.01□□□□□ -0.01
USP11-205ENST00000467378 PJVKQ0ZLH3 352 aa15.01□□□□□ -0.01
USP11-205ENST00000467378 ZNF562Q6V9R5 426 aa15.01□□□□□ -0.01
USP11-205ENST00000467378 CENPVQ7Z7K6 275 aaPredicted RBP15.01□□□□□ -0.01
USP11-205ENST00000467378 VKORC1L1Q8N0U8 176 aa15.01□□□□□ -0.01
USP11-205ENST00000467378 PUSL1Q8N0Z8 303 aaKnown RBP15.01□□□□□ -0.01
USP11-205ENST00000467378 STPG2Q8N412 459 aa15.01□□□□□ -0.01
USP11-205ENST00000467378 C11orf44Q8N8P7 122 aa15.01□□□□□ -0.01
USP11-205ENST00000467378 CCDC32Q9BV29 185 aa15.01□□□□□ -0.01
USP11-205ENST00000467378 ZNF580Q9UK33 172 aa15.01□□□□□ -0.01
USP11-205ENST00000467378 COL7A1Q02388 2944 aa15□□□□□ -0.01
USP11-205ENST00000467378 ARPC1BO15143 372 aaKnown RBP15□□□□□ -0.01
USP11-205ENST00000467378 S1PR2O95136 353 aa15□□□□□ -0.01
USP11-205ENST00000467378 EGR2P11161 476 aaPredicted RBP15□□□□□ -0.01
USP11-205ENST00000467378 TAS2R31P59538 309 aa15□□□□□ -0.01
USP11-205ENST00000467378 NDPQ00604 133 aa15□□□□□ -0.01
USP11-205ENST00000467378 ZNF846Q147U1 533 aa15□□□□□ -0.01
USP11-205ENST00000467378 POU2AF1Q16633 256 aa15□□□□□ -0.01
USP11-205ENST00000467378 C10orf99Q6UWK7 81 aa15□□□□□ -0.01
USP11-205ENST00000467378 CCDC71LQ8N9Z2 235 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms