RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 ACTL6BO94805 426 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 IGLV2-23P01705 113 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 IGF1P05019 195 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 ZNF735P0CB33 412 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 F2RP25116 425 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 TAS2R31P59538 309 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 RND3P61587 244 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 KLF9Q13886 244 aaPredicted RBP15.64■□□□□ 0.09
COL9A3-204ENST00000463487 ZNF562Q6V9R5 426 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 IDO2Q6ZQW0 420 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 STPG2Q8N412 459 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 COMMD1Q8N668 190 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 OR5AU1Q8NGC0 362 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 OR51S1Q8NGJ8 323 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 CLCC1Q96S66 551 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 PLEKHA2Q9HB19 425 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 PARP11Q9NR21 331 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 FAM212BQ9NTI7 297 aaPredicted RBP15.64■□□□□ 0.09
COL9A3-204ENST00000463487 COMMD9Q9P000 198 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 COPZ2Q9P299 210 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 ZNF580Q9UK33 172 aa15.64■□□□□ 0.09
COL9A3-204ENST00000463487 IGHV7-81A0A0B4J1V7 117 aa15.63■□□□□ 0.09
COL9A3-204ENST00000463487 CNIH1O95406 144 aa15.63■□□□□ 0.09
COL9A3-204ENST00000463487 CA2P00918 260 aa15.63■□□□□ 0.09
COL9A3-204ENST00000463487 NQO2P16083 231 aa15.63■□□□□ 0.09
COL9A3-204ENST00000463487 PIGPP57054 158 aa15.63■□□□□ 0.09
COL9A3-204ENST00000463487 ERVK-16P61578 105 aa15.63■□□□□ 0.09
COL9A3-204ENST00000463487 CX3CL1P78423 397 aa15.63■□□□□ 0.09
COL9A3-204ENST00000463487 TMEM267Q0VDI3 215 aaPredicted RBP15.63■□□□□ 0.09
COL9A3-204ENST00000463487 TBC1D26Q86UD7 250 aa15.63■□□□□ 0.09
COL9A3-204ENST00000463487 OR13C8Q8NGS7 320 aa15.63■□□□□ 0.09
COL9A3-204ENST00000463487 MARCH1Q8TCQ1 289 aa15.63■□□□□ 0.09
COL9A3-204ENST00000463487 CENPXA8MT69 81 aa15.62■□□□□ 0.09
COL9A3-204ENST00000463487 RAMP3O60896 148 aa15.62■□□□□ 0.09
COL9A3-204ENST00000463487 OPN1MWP04001 364 aa15.62■□□□□ 0.09
COL9A3-204ENST00000463487 CTSDP07339 412 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-204ENST00000463487 SAA1P0DJI8 122 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-204ENST00000463487 OPN1MW2P0DN77 364 aa15.62■□□□□ 0.09
COL9A3-204ENST00000463487 OPN1MW3P0DN78 364 aa15.62■□□□□ 0.09
COL9A3-204ENST00000463487 GNB1P62873 340 aa15.62■□□□□ 0.09
COL9A3-204ENST00000463487 RHOVQ96L33 236 aa15.62■□□□□ 0.09
COL9A3-204ENST00000463487 NOL4LQ96MY1 436 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-204ENST00000463487 HRASLSQ9HDD0 168 aa15.62■□□□□ 0.09
COL9A3-204ENST00000463487 SRRM4A7MD48 611 aaKnown RBP15.61■□□□□ 0.09
COL9A3-204ENST00000463487 ATP6V0E1O15342 81 aa15.61■□□□□ 0.09
COL9A3-204ENST00000463487 MPPED1O15442 326 aa15.61■□□□□ 0.09
COL9A3-204ENST00000463487 B3GALNT1O75752 331 aa15.61■□□□□ 0.09
COL9A3-204ENST00000463487 OR2A4O95047 310 aa15.61■□□□□ 0.09
COL9A3-204ENST00000463487 FXYD3Q14802 87 aa15.61■□□□□ 0.09
COL9A3-204ENST00000463487 MMD2Q8IY49 270 aa15.61■□□□□ 0.09
COL9A3-204ENST00000463487 DMBX1Q8NFW5 382 aa15.61■□□□□ 0.09
COL9A3-204ENST00000463487 OR4A5Q8NH83 315 aa15.61■□□□□ 0.09
COL9A3-204ENST00000463487 ARPC1AQ92747 370 aa15.61■□□□□ 0.09
COL9A3-204ENST00000463487 OR2A7Q96R45 310 aa15.61■□□□□ 0.09
COL9A3-204ENST00000463487 LINC00527Q9UJ94 153 aa15.61■□□□□ 0.09
COL9A3-204ENST00000463487 STAB1Q9NY15 2570 aa15.6■□□□□ 0.09
COL9A3-204ENST00000463487 TRAV41A0A0B4J266 112 aa15.6■□□□□ 0.09
COL9A3-204ENST00000463487 NAP1L6A6NFF2 107 aa15.6■□□□□ 0.09
COL9A3-204ENST00000463487 M0QZ24 198 aa15.6■□□□□ 0.09
COL9A3-204ENST00000463487 SERPINE2P07093 398 aa15.6■□□□□ 0.09
COL9A3-204ENST00000463487 CRYGBP07316 175 aa15.6■□□□□ 0.09
COL9A3-204ENST00000463487 PI3P19957 117 aa15.6■□□□□ 0.09
COL9A3-204ENST00000463487 BRWD1-AS2P59051 145 aa15.6■□□□□ 0.09
COL9A3-204ENST00000463487 PRSS8Q16651 343 aa15.6■□□□□ 0.09
COL9A3-204ENST00000463487 TEX38Q6PEX7 206 aa15.6■□□□□ 0.09
COL9A3-204ENST00000463487 SGMS2Q8NHU3 365 aa15.6■□□□□ 0.09
COL9A3-204ENST00000463487 CCDC32Q9BV29 185 aa15.6■□□□□ 0.09
COL9A3-204ENST00000463487 WDR12Q9GZL7 423 aaKnown RBP15.6■□□□□ 0.09
COL9A3-204ENST00000463487 AKIP1Q9NQ31 210 aa15.6■□□□□ 0.09
COL9A3-204ENST00000463487 TPSG1Q9NRR2 321 aa15.6■□□□□ 0.09
COL9A3-204ENST00000463487 TEX13DA0A0J9YY54 714 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-204ENST00000463487 LINC01548A6NM66 108 aa15.59■□□□□ 0.09
COL9A3-204ENST00000463487 H0Y980 276 aa15.59■□□□□ 0.09
COL9A3-204ENST00000463487 FCN1O00602 326 aa15.59■□□□□ 0.09
COL9A3-204ENST00000463487 ATG12O94817 140 aa15.59■□□□□ 0.09
COL9A3-204ENST00000463487 KBTBD11O94819 623 aa15.59■□□□□ 0.09
COL9A3-204ENST00000463487 IL7P13232 177 aa15.59■□□□□ 0.09
COL9A3-204ENST00000463487 RPA2P15927 270 aa15.59■□□□□ 0.09
COL9A3-204ENST00000463487 CD40LGP29965 261 aa15.59■□□□□ 0.09
COL9A3-204ENST00000463487 LPAR6P43657 344 aa15.59■□□□□ 0.09
COL9A3-204ENST00000463487 KRTAP10-3P60369 221 aa15.59■□□□□ 0.09
COL9A3-204ENST00000463487 SRSF4Q08170 494 aaKnown RBP15.59■□□□□ 0.09
COL9A3-204ENST00000463487 TNXAQ16473 311 aa15.59■□□□□ 0.09
COL9A3-204ENST00000463487 BAK1Q16611 211 aa15.59■□□□□ 0.09
COL9A3-204ENST00000463487 SSX9Q7RTT3 188 aa15.59■□□□□ 0.09
COL9A3-204ENST00000463487 C11orf44Q8N8P7 122 aa15.59■□□□□ 0.09
COL9A3-204ENST00000463487 GRPEL2Q8TAA5 225 aa15.59■□□□□ 0.09
COL9A3-204ENST00000463487 WIPF2Q8TF74 440 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-204ENST00000463487 R3HDM4Q96D70 268 aa15.59■□□□□ 0.09
COL9A3-204ENST00000463487 SLC25A21Q9BQT8 299 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-204ENST00000463487 C7orf50Q9BRJ6 194 aaKnown RBP15.59■□□□□ 0.09
COL9A3-204ENST00000463487 BET1LQ9NYM9 111 aa15.59■□□□□ 0.09
COL9A3-204ENST00000463487 S1PR2O95136 353 aa15.58■□□□□ 0.08
COL9A3-204ENST00000463487 CD28P10747 220 aa15.58■□□□□ 0.08
COL9A3-204ENST00000463487 MAS1LP35410 378 aa15.58■□□□□ 0.08
COL9A3-204ENST00000463487 CRIP2P52943 208 aaPredicted RBP15.58■□□□□ 0.08
COL9A3-204ENST00000463487 POU2AF1Q16633 256 aa15.58■□□□□ 0.08
COL9A3-204ENST00000463487 ECSCRQ19T08 205 aa15.58■□□□□ 0.08
COL9A3-204ENST00000463487 C2orf68Q2NKX9 166 aa15.58■□□□□ 0.08
COL9A3-204ENST00000463487 KHDC1LQ5JSQ8 128 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms