RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 A0A1W2PR80 420 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 CD5LO43866 347 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 UPK3AO75631 287 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 WNT2P09544 360 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 TACSTD2P09758 323 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 SFTPDP35247 375 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 DSCR9P59020 149 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 LCN2P80188 198 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 C9orf135Q5VTT2 229 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 PLCXD3Q63HM9 321 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 AGTRAPQ6RW13 159 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 TMEM64Q6YI46 380 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 C2orf73Q8N5S3 287 aaPredicted RBP4.95□□□□□ -1.62
CLK1-207ENST00000461981 OR10X1Q8NGY0 326 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 SLC25A40Q8TBP6 338 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 RPS4Y2Q8TD47 263 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 NEU4Q8WWR8 484 aaPredicted RBP4.95□□□□□ -1.62
CLK1-207ENST00000461981 BORCS7Q96B45 105 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 RCHY1Q96PM5 261 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 RAB1BQ9H0U4 201 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 MRPL18Q9H0U6 180 aaKnown RBP4.95□□□□□ -1.62
CLK1-207ENST00000461981 MRPL16Q9NX20 251 aaKnown RBP4.95□□□□□ -1.62
CLK1-207ENST00000461981 POLR1DQ9Y2S0 133 aa4.95□□□□□ -1.62
CLK1-207ENST00000461981 TRAV9-2A0A087WT02 112 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 hCG_38984A0A1B0GV85 526 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 PGPEP1LA6NFU8 196 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 K7EP34 96 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 HMGB3O15347 200 aaKnown RBP4.94□□□□□ -1.62
CLK1-207ENST00000461981 KBTBD11O94819 623 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 S1PR2O95136 353 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 NXPH3O95157 252 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 KRASP01116 189 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 FSTP19883 344 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 COL8A1P27658 744 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 MTCP1P56278 107 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 IL13RA2Q14627 380 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 HIST2H2BCQ6DN03 193 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 ZNF562Q6V9R5 426 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 C12orf54Q6X4T0 127 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 CXorf67Q86X51 503 aaPredicted RBP4.94□□□□□ -1.62
CLK1-207ENST00000461981 PRR22Q8IZ63 422 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 MTURNQ8N3F0 131 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 OR5A2Q8NGI9 324 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 SGMS2Q8NHU3 365 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.94□□□□□ -1.62
CLK1-207ENST00000461981 RAB37Q96AX2 223 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 GALMQ96C23 342 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 ANAPC16Q96DE5 110 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 P2RX4Q99571 388 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 ST6GALNAC5Q9BVH7 336 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 PNRC2Q9NPJ4 139 aaKnown RBP4.94□□□□□ -1.62
CLK1-207ENST00000461981 DMRT3Q9NQL9 472 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 DECR2Q9NUI1 292 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 A0A1W2PPV4 95 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 IGSF23A1L1A6 192 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 F2RL2O00254 374 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 HS3ST1O14792 307 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 CA2P00918 260 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 SMIM17P0DL12 118 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 USF1P22415 310 aaPredicted RBP4.94□□□□□ -1.62
CLK1-207ENST00000461981 GAGE5Q13069 117 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 GAGE6Q13070 117 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 ZNF74Q16587 644 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 LYZL2Q7Z4W2 148 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 ZNF441Q8N8Z8 693 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 OR2K2Q8NGT1 345 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 PLPPR1Q8TBJ4 325 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 GMPPAQ96IJ6 420 aaPredicted RBP4.94□□□□□ -1.62
CLK1-207ENST00000461981 PRSS27Q9BQR3 290 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 CLEC7AQ9BXN2 247 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 VSIRQ9H7M9 311 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 GNB4Q9HAV0 340 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 NECAP2Q9NVZ3 263 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 TAC3Q9UHF0 121 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 ARL2-SNX15V9GYD0 113 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 CENPVL1A0A0U1RR11 272 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 C19orf84I3L1E1 186 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 HRKO00198 91 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 P2RY10O00398 339 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 FCN1O00602 326 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 B3GALT2O43825 422 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 CA1P00915 261 aaPredicted RBP4.94□□□□□ -1.62
CLK1-207ENST00000461981 P04436 131 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 AMY2BP19961 511 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 IL11P20809 199 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 CRYGSP22914 178 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 NCBP2P52298 156 aaKnown RBP eCLIP4.94□□□□□ -1.62
CLK1-207ENST00000461981 SSBP2P81877 361 aaPredicted RBP4.94□□□□□ -1.62
CLK1-207ENST00000461981 MFGE8Q08431 387 aaPredicted RBP4.94□□□□□ -1.62
CLK1-207ENST00000461981 ANXA2RQ3ZCQ2 193 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 WDR38Q5JTN6 314 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 TSPO2Q5TGU0 170 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 FAM166AQ6J272 317 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 ABHD17CQ6PCB6 329 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.94□□□□□ -1.62
CLK1-207ENST00000461981 OR5D14Q8NGL3 314 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 VCX2Q9H322 139 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 PRTFDC1Q9NRG1 225 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 CRIM1Q9NZV1 1036 aa4.94□□□□□ -1.62
CLK1-207ENST00000461981 HSPB8Q9UJY1 196 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms