RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 LINC00854A0A1B0GVQ3 168 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 CLPSL1A2RUU4 121 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 ATG12O94817 140 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 SERPINE2P07093 398 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 CRYGBP07316 175 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 FGF2P09038 288 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 VSIG10L2P0DP72 767 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 NQO2P16083 231 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 PI3P19957 117 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 SLC6A1P30531 599 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 DEFA1P59665 94 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 DEFA3P59666 94 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 DHODHQ02127 395 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 OR2B11Q5JQS5 317 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 OR4A5Q8NH83 315 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 GALNT14Q96FL9 552 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 NAA60Q9H7X0 242 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 METTL1Q9UBP6 276 aaKnown RBP11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 ZNF580Q9UK33 172 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 VSIG4Q9Y279 399 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 KCNIP3Q9Y2W7 256 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 SIGLEC9Q9Y336 463 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 TEX13DA0A0J9YY54 714 aaPredicted RBP11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 CRYM-AS1A6NIL9 109 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 SRRM4A7MD48 611 aaKnown RBP11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 SLC25A17O43808 307 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 RAMP3O60896 148 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 IGHG2P01859 326 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 CNTFRP26992 372 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 BTCP35070 178 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 CCR6P51684 374 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 PLGLAQ15195 96 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 ZNF585BQ52M93 769 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 TMEM128Q5BJH2 165 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 ZNF562Q6V9R5 426 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 PPP1R27Q86WC6 154 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 SGPP2Q8IWX5 399 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 LINC01006Q8NI28 216 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 RHOVQ96L33 236 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 FBXL15Q9H469 300 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 PALMDQ9NP74 551 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 TBC1D24Q9ULP9 559 aa11.35□□□□□ -0.59
HMGXB4-204ENST00000455359 PEX14O75381 377 aa11.34□□□□□ -0.59
HMGXB4-204ENST00000455359 OR2A4O95047 310 aa11.34□□□□□ -0.59
HMGXB4-204ENST00000455359 ANXA3P12429 323 aa11.34□□□□□ -0.59
HMGXB4-204ENST00000455359 UCP1P25874 307 aa11.34□□□□□ -0.59
HMGXB4-204ENST00000455359 LPAR6P43657 344 aa11.34□□□□□ -0.59
HMGXB4-204ENST00000455359 ERVK-16P61578 105 aa11.34□□□□□ -0.59
HMGXB4-204ENST00000455359 PRSS8Q16651 343 aa11.34□□□□□ -0.59
HMGXB4-204ENST00000455359 CENPSQ8N2Z9 138 aa11.34□□□□□ -0.59
HMGXB4-204ENST00000455359 TMEM167AQ8TBQ9 72 aa11.34□□□□□ -0.59
HMGXB4-204ENST00000455359 OR2A7Q96R45 310 aa11.34□□□□□ -0.59
HMGXB4-204ENST00000455359 TMEM222Q9H0R3 208 aa11.34□□□□□ -0.59
HMGXB4-204ENST00000455359 BET1LQ9NYM9 111 aa11.34□□□□□ -0.59
HMGXB4-204ENST00000455359 STAB1Q9NY15 2570 aa11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 FBN1P35555 2871 aaKnown RBP11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 FAM240BA0A1B0GVZ2 78 aa11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 AP4M1O00189 453 aa11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 IGF1P05019 195 aa11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 MAS1LP35410 378 aa11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 VDAC2P45880 294 aaPredicted RBP11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 SRPXP78539 464 aa11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 IFITM3Q01628 133 aa11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 ARSJQ5FYB0 599 aaPredicted RBP11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 SLC35E3Q7Z769 313 aa11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 SLC25A42Q86VD7 318 aa11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 FOXRED2Q8IWF2 684 aa11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 MMD2Q8IY49 270 aa11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 PUSL1Q8N0Z8 303 aaKnown RBP11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 IL22RA2Q969J5 263 aa11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 TMEM230Q96A57 120 aa11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 TP53RKQ96S44 253 aa11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 GON7Q9BXV9 100 aa11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 ALX4Q9H161 411 aaPredicted RBP11.33□□□□□ -0.6
HMGXB4-204ENST00000455359 IGHV7-81A0A0B4J1V7 117 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 MARCH11A6NNE9 402 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 KBTBD11O94819 623 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 S1PR2O95136 353 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 CDS2O95674 445 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 TCRBP04435 133 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 IL6RP08887 468 aaPredicted RBP11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 SAA1P0DJI8 122 aaPredicted RBP11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 AKR1C4P17516 323 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 CX3CL1P78423 397 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 C9orf152Q5JTZ5 239 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 TMED4Q7Z7H5 227 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 ADAD2Q8NCV1 583 aaKnown RBP11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 CHPT1Q8WUD6 406 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 R3HDM4Q96D70 268 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 RBMXL1Q96E39 390 aaKnown RBP11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 TMEM56Q96MV1 263 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 WNT10AQ9GZT5 417 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 OR51J1Q9H342 316 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 SERTAD4Q9NUC0 356 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 RNF114Q9Y508 228 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 TMEM56-RWDD3S4R434 201 aa11.32□□□□□ -0.6
HMGXB4-204ENST00000455359 ACTL6BO94805 426 aa11.31□□□□□ -0.6
HMGXB4-204ENST00000455359 OR5AC1P0C628 307 aa11.31□□□□□ -0.6
HMGXB4-204ENST00000455359 CRIP2P52943 208 aaPredicted RBP11.31□□□□□ -0.6
HMGXB4-204ENST00000455359 PROK1P58294 105 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 251.5 ms