RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 Q8N377 158 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 TMEM156Q8N614 296 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 SIGLECL1Q8N7X8 197 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZNF709Q8N972 641 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZFP62Q8NB50 900 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZNRF1Q8ND25 227 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 OR1L6Q8NGR2 347 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 KCNG3Q8TAE7 436 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 TAF15Q92804 592 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 APH1AQ96BI3 265 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 PINX1Q96BK5 328 aaKnown RBP3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 STARD4Q96DR4 205 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 SLAMF6Q96DU3 332 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 REEP6Q96HR9 211 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 Q96M85 177 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 JSRP1Q96MG2 331 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 AP1S3Q96PC3 154 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 ATP5SQ99766 215 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 GABRG3Q99928 467 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 PRSS27Q9BQR3 290 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 WFDC6Q9BQY6 131 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 PSMG3Q9BT73 122 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 SCRT1Q9BWW7 348 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 TMEM59Q9BXS4 323 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 CST9LQ9H4G1 147 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 Q9HAA7 133 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 SLC2A9Q9NRM0 540 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 TAS2R4Q9NYW5 299 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 GNG13Q9P2W3 67 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 CLN8Q9UBY8 286 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 TAC3Q9UHF0 121 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 MRM2Q9UI43 246 aaKnown RBP3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 FUT9Q9Y231 359 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 MRPS16Q9Y3D3 137 aaKnown RBP3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 IER3IP1Q9Y5U9 82 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 CPAMD8Q8IZJ3 1885 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 MPDZO75970 2070 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 MDFIC2A0A1B0GVS7 189 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 A0A1B0GWA3 101 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 LOC107986453A0A1B0GWG9 222 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 A0A1W2PRS3 328 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 CRYM-AS1A6NIL9 109 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 OR5B21A6NL26 309 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 ZFP92A6NM28 416 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 KRTAP16-1A8MUX0 517 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 HIDE1A8MVS5 230 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 H0Y8G0 127 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 ERI3O43414 337 aaKnown RBP3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 RAMP3O60896 148 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 CSTAP01040 98 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 NRASP01111 189 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 KRASP01116 189 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 CGAP01215 116 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 ISG15P05161 165 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 OR9G9P0C7N8 305 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 STAG3L3P0CL85 134 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 ESDP10768 282 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 HIST1H1TP22492 207 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 CCNOP22674 350 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 ATP6V0CP27449 155 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 PSMB5P28074 263 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 GUCA1AP43080 201 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 PSMB3P49720 205 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 ZNF136P52737 540 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 PRRX1P54821 245 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 FGF8P55075 233 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 HBG1P69891 147 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 HBG2P69892 147 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 BTG2P78543 158 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 FMODQ06828 376 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 CEBPEQ15744 281 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 PSG3Q16557 428 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 PLPPR5Q32ZL2 321 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 ANKRD55Q3KP44 614 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 TPTE2P1Q5T6R2 138 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 RAET1LQ5VY80 246 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 WDR25Q64LD2 544 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 SLC8B1Q6J4K2 584 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 MRPL54Q6P161 138 aaKnown RBP3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 C12orf54Q6X4T0 127 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 ABHD12BQ7Z5M8 362 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 HMGN2P46Q86SG4 172 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 VASH2Q86V25 355 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 LHFPL1Q86WI0 220 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 SLC39A11Q8N1S5 342 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 ABHD12Q8N2K0 398 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 OR5A2Q8NGI9 324 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 OTOSQ8NHW6 89 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 ZNF596Q8TC21 504 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 SCGB1C1Q8TD33 95 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 TMEM230Q96A57 120 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 KCNS1Q96KK3 526 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 DEFB118Q96PH6 123 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 SMIM14Q96QK8 99 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 NMNAT3Q96T66 252 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 PARP12Q9H0J9 701 aaKnown RBP3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 BANF2Q9H503 90 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 NAA60Q9H7X0 242 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 PLEKHF2Q9H8W4 249 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms