RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 DNASE2BQ8WZ79 361 aa11.21□□□□□ -0.61
SPG11-202ENST00000427534 GPR146Q96CH1 333 aa11.21□□□□□ -0.61
SPG11-202ENST00000427534 RHOVQ96L33 236 aa11.21□□□□□ -0.61
SPG11-202ENST00000427534 LHFPL5Q8TAF8 219 aa11.21□□□□□ -0.61
SPG11-202ENST00000427534 NPVFQ9HCQ7 196 aa11.21□□□□□ -0.61
SPG11-202ENST00000427534 DICER1Q9UPY3 1922 aaKnown RBP11.21□□□□□ -0.62
SPG11-202ENST00000427534 IFITM10A6NMD0 228 aa11.21□□□□□ -0.62
SPG11-202ENST00000427534 TMEM177Q53S58 311 aa11.21□□□□□ -0.62
SPG11-202ENST00000427534 SLC25A47Q6Q0C1 308 aa11.21□□□□□ -0.62
SPG11-202ENST00000427534 CA11O75493 328 aa11.21□□□□□ -0.62
SPG11-202ENST00000427534 FOXH1O75593 365 aa11.21□□□□□ -0.62
SPG11-202ENST00000427534 SCGB1A1P11684 91 aa11.21□□□□□ -0.62
SPG11-202ENST00000427534 SNRPD3P62318 126 aaKnown RBP11.21□□□□□ -0.62
SPG11-202ENST00000427534 IFITM3Q01628 133 aa11.21□□□□□ -0.62
SPG11-202ENST00000427534 MRAP2Q96G30 205 aa11.21□□□□□ -0.62
SPG11-202ENST00000427534 PPP1R3EQ9H7J1 279 aa11.21□□□□□ -0.62
SPG11-202ENST00000427534 CEACAM1P13688 526 aa11.21□□□□□ -0.62
SPG11-202ENST00000427534 CD33P20138 364 aa11.21□□□□□ -0.62
SPG11-202ENST00000427534 VDAC2P45880 294 aaPredicted RBP11.21□□□□□ -0.62
SPG11-202ENST00000427534 UBE2V2Q15819 145 aa11.21□□□□□ -0.62
SPG11-202ENST00000427534 ZNF818PQ6ZRF7 136 aa11.21□□□□□ -0.62
SPG11-202ENST00000427534 TMEM219Q86XT9 240 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 TCTEX1D1Q8N7M0 179 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 SMIM10L1P0DMW3 83 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 CCL3L1P16619 93 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 FSTP19883 344 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 SUMO2P61956 95 aaKnown RBP11.2□□□□□ -0.62
SPG11-202ENST00000427534 CALHM1Q8IU99 346 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 GCSAMQ8N6F7 178 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 FBLIM1Q8WUP2 373 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 SMIM10Q96HG1 83 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 ZNF256Q9Y2P7 627 aaPredicted RBP11.2□□□□□ -0.62
SPG11-202ENST00000427534 ISLRO14498 428 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 FXYD7P58549 80 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 C1QL2Q7Z5L3 287 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 CYB561D1Q8N8Q1 229 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 APCDD1LQ8NCL9 501 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 SPSB2Q99619 263 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 IFI6P09912 130 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 IGHV1-2P23083 117 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 ZNF415Q09FC8 603 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 IBA57Q5T440 356 aaKnown RBP11.2□□□□□ -0.62
SPG11-202ENST00000427534 ZFC3H1O60293 1989 aaKnown RBP11.2□□□□□ -0.62
SPG11-202ENST00000427534 TRBV5-5A0A0J9YX44 114 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 B9A039 149 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 C18orf15Q96N68 181 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 BET1LQ9NYM9 111 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 NRXN2Q9P2S2 1712 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 ZNF318Q5VUA4 2279 aa11.2□□□□□ -0.62
SPG11-202ENST00000427534 CRYBB3P26998 211 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 NPIPB11E5RHQ5 1161 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 RRHO14718 337 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 FAM159AQ6UWV7 190 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 OR4C13Q8NGP0 309 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 TUBGCP6Q96RT7 1819 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 TRGV2A0A075B6R0 118 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 PDE6DO43924 150 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 GATA2P23769 480 aaPredicted RBP11.19□□□□□ -0.62
SPG11-202ENST00000427534 MC5RP33032 325 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 LINC00305Q7Z4B0 112 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 BEND2Q8NDZ0 799 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 ICE1Q9Y2F5 2266 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 TGFBR3LH3BV60 316 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 CDS2O95674 445 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 GCGP01275 180 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 OR51G1Q8NGK1 321 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 DOCK3Q8IZD9 2030 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 RP1P56715 2156 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 IGLV1-36A0A0B4J1U3 117 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 TCRBV4S1A1TA0A5B7 111 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 HOXD4P09016 255 aaPredicted RBP11.19□□□□□ -0.62
SPG11-202ENST00000427534 LEMD1Q68G75 181 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 FBXL7Q9UJT9 491 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 HSPB8Q9UJY1 196 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 IGKV1D-43A0A0B4J1Z2 117 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 MARCH11A6NNE9 402 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 NPIPB6E9PJ23 425 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 TMEM191AQ9H0A3 160 aa11.19□□□□□ -0.62
SPG11-202ENST00000427534 SCN8AQ9UQD0 1980 aa11.18□□□□□ -0.62
SPG11-202ENST00000427534 CEACAM4O75871 244 aa11.18□□□□□ -0.62
SPG11-202ENST00000427534 GFI1BQ5VTD9 330 aa11.18□□□□□ -0.62
SPG11-202ENST00000427534 SELENOHQ8IZQ5 122 aaKnown RBP11.18□□□□□ -0.62
SPG11-202ENST00000427534 ZBTB34Q8NCN2 500 aa11.18□□□□□ -0.62
SPG11-202ENST00000427534 OR4X2Q8NGF9 303 aa11.18□□□□□ -0.62
SPG11-202ENST00000427534 ANAPC16Q96DE5 110 aa11.18□□□□□ -0.62
SPG11-202ENST00000427534 ARID1AO14497 2285 aa11.18□□□□□ -0.62
SPG11-202ENST00000427534 TRAV40A0A0B4J280 105 aa11.18□□□□□ -0.62
SPG11-202ENST00000427534 ACAA1P09110 424 aaPredicted RBP11.18□□□□□ -0.62
SPG11-202ENST00000427534 ZNF703Q9H7S9 590 aaPredicted RBP11.18□□□□□ -0.62
SPG11-202ENST00000427534 CD99P14209 185 aa11.18□□□□□ -0.62
SPG11-202ENST00000427534 UBE2DNLQ8IWF7 75 aa11.18□□□□□ -0.62
SPG11-202ENST00000427534 MMD2Q8IY49 270 aa11.18□□□□□ -0.62
SPG11-202ENST00000427534 ALX4Q9H161 411 aaPredicted RBP11.18□□□□□ -0.62
SPG11-202ENST00000427534 OR4A47Q6IF82 309 aa11.18□□□□□ -0.62
SPG11-202ENST00000427534 SGMS2Q8NHU3 365 aa11.18□□□□□ -0.62
SPG11-202ENST00000427534 CTHRC1Q96CG8 243 aa11.18□□□□□ -0.62
SPG11-202ENST00000427534 A0A1W2PR77 199 aa11.17□□□□□ -0.62
SPG11-202ENST00000427534 CA2P00918 260 aa11.17□□□□□ -0.62
SPG11-202ENST00000427534 HKR1P10072 659 aa11.17□□□□□ -0.62
SPG11-202ENST00000427534 MARS2Q96GW9 593 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms