RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 PTHLHP12272 177 aa7.14□□□□□ -1.27
NUP50-206ENST00000422489 GP9P14770 177 aa7.14□□□□□ -1.27
NUP50-206ENST00000422489 ZP3P21754 424 aa7.14□□□□□ -1.27
NUP50-206ENST00000422489 AADACP22760 399 aa7.14□□□□□ -1.27
NUP50-206ENST00000422489 RPL30P62888 115 aaKnown RBP7.14□□□□□ -1.27
NUP50-206ENST00000422489 SSBP2P81877 361 aaPredicted RBP7.14□□□□□ -1.27
NUP50-206ENST00000422489 TATDN3Q17R31 274 aa7.14□□□□□ -1.27
NUP50-206ENST00000422489 KCTD9Q7L273 389 aa7.14□□□□□ -1.27
NUP50-206ENST00000422489 TCTEX1D2Q8WW35 142 aa7.14□□□□□ -1.27
NUP50-206ENST00000422489 TINAGL1Q9GZM7 467 aaPredicted RBP7.14□□□□□ -1.27
NUP50-206ENST00000422489 DIABLOQ9NR28 239 aa7.14□□□□□ -1.27
NUP50-206ENST00000422489 PEF1Q9UBV8 284 aaKnown RBP7.14□□□□□ -1.27
NUP50-206ENST00000422489 SPATA2Q9UM82 520 aa7.14□□□□□ -1.27
NUP50-206ENST00000422489 IGKV1D-13A0A0B4J2D9 117 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 TNFSF12O43508 249 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 OR9G9P0C7N8 305 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 SAA1P0DJI8 122 aaPredicted RBP7.13□□□□□ -1.27
NUP50-206ENST00000422489 IGKV1-13P0DP09 117 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 FCGR2CP31995 323 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 SYNJ2BPP57105 145 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 LSM3P62310 102 aaKnown RBP7.13□□□□□ -1.27
NUP50-206ENST00000422489 ATP5G2Q06055 141 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 CDK10Q15131 360 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 MRGPRG-AS1Q2M3A8 158 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 HOGA1Q86XE5 327 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 MMD2Q8IY49 270 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 VKORC1L1Q8N0U8 176 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 MFSD4AQ8N468 514 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 GVQW1Q8N7I0 195 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 BEST4Q8NFU0 473 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 SRSF12Q8WXF0 261 aaKnown RBP7.13□□□□□ -1.27
NUP50-206ENST00000422489 USMG5Q96IX5 58 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 GPHA2Q96T91 129 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 ZNF430Q9H8G1 570 aaPredicted RBP7.13□□□□□ -1.27
NUP50-206ENST00000422489 CCL28Q9NRJ3 127 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 TAS2R8Q9NYW2 309 aa7.13□□□□□ -1.27
NUP50-206ENST00000422489 MRPS7Q9Y2R9 242 aaKnown RBP7.13□□□□□ -1.27
NUP50-206ENST00000422489 DPPA5A6NC42 116 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 MEIS3P1A6NDR6 274 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 HMX3A6NHT5 357 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 TRIM64CA6NLI5 447 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 CREBL2O60519 120 aaPredicted RBP7.12□□□□□ -1.27
NUP50-206ENST00000422489 OR2A4O95047 310 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 TGFBR1P36897 503 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 RHOGP84095 191 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 KLF5Q13887 457 aaPredicted RBP7.12□□□□□ -1.27
NUP50-206ENST00000422489 RPEL1Q2QD12 228 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 KCTD21Q4G0X4 260 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 C10orf55Q5SWW7 151 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 ZNF343Q6P1L6 599 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 SSX9Q7RTT3 188 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 SBSPONQ8IVN8 264 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 ADAD2Q8NCV1 583 aaKnown RBP7.12□□□□□ -1.27
NUP50-206ENST00000422489 OR4S2Q8NH73 311 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 SECTM1Q8WVN6 248 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 S100A16Q96FQ6 103 aaKnown RBP7.12□□□□□ -1.27
NUP50-206ENST00000422489 FYTTD1Q96QD9 318 aaKnown RBP7.12□□□□□ -1.27
NUP50-206ENST00000422489 OR2A7Q96R45 310 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 HSD17B10Q99714 261 aaKnown RBP7.12□□□□□ -1.27
NUP50-206ENST00000422489 SPIN2AQ99865 258 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 SPIN2BQ9BPZ2 258 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 AUNIPQ9H7T9 357 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 AKIP1Q9NQ31 210 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 ADAM30Q9UKF2 790 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 ETV7Q9Y603 341 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 DNAH3Q8TD57 4116 aa7.12□□□□□ -1.27
NUP50-206ENST00000422489 AIREO43918 545 aa7.11□□□□□ -1.27
NUP50-206ENST00000422489 RBMXL2O75526 392 aaKnown RBP7.11□□□□□ -1.27
NUP50-206ENST00000422489 IGLV2-14P01704 120 aa7.11□□□□□ -1.27
NUP50-206ENST00000422489 TRBV12-3P01733 135 aa7.11□□□□□ -1.27
NUP50-206ENST00000422489 FRMD6-AS1P0C7T7 363 aa7.11□□□□□ -1.27
NUP50-206ENST00000422489 RPS19P39019 145 aaKnown RBP7.11□□□□□ -1.27
NUP50-206ENST00000422489 SCAND1P57086 179 aa7.11□□□□□ -1.27
NUP50-206ENST00000422489 FXYD4P59646 89 aa7.11□□□□□ -1.27
NUP50-206ENST00000422489 DYRK1AQ13627 763 aa7.11□□□□□ -1.27
NUP50-206ENST00000422489 ZNF66Q6ZN08 573 aa7.11□□□□□ -1.27
NUP50-206ENST00000422489 TTC9CQ8N5M4 171 aa7.11□□□□□ -1.27
NUP50-206ENST00000422489 OR9G4Q8NGQ1 327 aa7.11□□□□□ -1.27
NUP50-206ENST00000422489 SNAPC3Q92966 411 aa7.11□□□□□ -1.27
NUP50-206ENST00000422489 SLC25A38Q96DW6 304 aa7.11□□□□□ -1.27
NUP50-206ENST00000422489 SLC5A7Q9GZV3 580 aa7.11□□□□□ -1.27
NUP50-206ENST00000422489 A0A0A6YYH2 397 aa7.1□□□□□ -1.27
NUP50-206ENST00000422489 A6NJ64 397 aa7.1□□□□□ -1.27
NUP50-206ENST00000422489 H0Y980 276 aa7.1□□□□□ -1.27
NUP50-206ENST00000422489 OR2J3O76001 311 aa7.1□□□□□ -1.27
NUP50-206ENST00000422489 BRI3O95415 125 aa7.1□□□□□ -1.27
NUP50-206ENST00000422489 HRASP01112 189 aa7.1□□□□□ -1.27
NUP50-206ENST00000422489 PPYP01298 95 aa7.1□□□□□ -1.27
NUP50-206ENST00000422489 IGLV1-51P01701 117 aa7.1□□□□□ -1.27
NUP50-206ENST00000422489 CBX5P45973 191 aa7.1□□□□□ -1.27
NUP50-206ENST00000422489 RPL27AP46776 148 aaKnown RBP7.1□□□□□ -1.27
NUP50-206ENST00000422489 ZNF45Q02386 682 aa7.1□□□□□ -1.27
NUP50-206ENST00000422489 EXOSC2Q13868 293 aaKnown RBP7.1□□□□□ -1.27
NUP50-206ENST00000422489 TIMM50Q3ZCQ8 353 aa7.1□□□□□ -1.27
NUP50-206ENST00000422489 C19orf35Q6ZS72 473 aa7.1□□□□□ -1.27
NUP50-206ENST00000422489 SLC25A42Q86VD7 318 aa7.1□□□□□ -1.27
NUP50-206ENST00000422489 SGPP2Q8IWX5 399 aa7.1□□□□□ -1.27
NUP50-206ENST00000422489 SPAG16Q8N0X2 631 aa7.1□□□□□ -1.27
NUP50-206ENST00000422489 TSPAN14Q8NG11 270 aa7.1□□□□□ -1.27
NUP50-206ENST00000422489 OR5AP2Q8NGF4 316 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms