RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 OR5H2Q8NGV7 314 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 TMEM167AQ8TBQ9 72 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 GPX8Q8TED1 209 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 NUDCD2Q8WVJ2 157 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 FCAMRQ8WWV6 532 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 DEDD2Q8WXF8 326 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 ARPC1AQ92747 370 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 RITA1Q96K30 269 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 RHOVQ96L33 236 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 ATP6V0BQ99437 205 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 TSC22D3Q99576 134 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 SLC5A7Q9GZV3 580 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 PARP12Q9H0J9 701 aaKnown RBP4.99□□□□□ -1.61
USP54-202ENST00000413442 RNF167Q9H6Y7 350 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 RANGRFQ9HD47 186 aaPredicted RBP4.99□□□□□ -1.61
USP54-202ENST00000413442 PARP11Q9NR21 331 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 BET1LQ9NYM9 111 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 THYN1Q9P016 225 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 COMMD3Q9UBI1 195 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 KLK9Q9UKQ9 250 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 C13orf42A0A1B0GVH6 325 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 A0A1W2PRX2 142 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 SMIM30A4D0T7 59 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 SH2D7A6NKC9 451 aaPredicted RBP4.98□□□□□ -1.61
USP54-202ENST00000413442 FAM223BA6NKX1 122 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 LINC00473A8K010 186 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 ZNF701M0R085 212 aaPredicted RBP4.98□□□□□ -1.61
USP54-202ENST00000413442 FCN1O00602 326 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 CTDSPLO15194 276 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 FCGR3BO75015 233 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 CRYZL1O95825 349 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 CA2P00918 260 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 IGLV2-14P01704 120 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 IFNA6P05013 189 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 LGALS1P09382 135 aaKnown RBP4.98□□□□□ -1.61
USP54-202ENST00000413442 RPA2P15927 270 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 F2RP25116 425 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 PTBP1P26599 531 aaKnown RBP eCLIP4.98□□□□□ -1.61
USP54-202ENST00000413442 CNTFRP26992 372 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 NCS1P62166 190 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 LSM3P62310 102 aaKnown RBP4.98□□□□□ -1.61
USP54-202ENST00000413442 DGCR2P98153 550 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 EIF4EBP1Q13541 118 aaPredicted RBP4.98□□□□□ -1.61
USP54-202ENST00000413442 VAX1Q5SQQ9 334 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 LYSMD2Q8IV50 215 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 FAM223AQ8IWN6 122 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 PUSL1Q8N0Z8 303 aaKnown RBP4.98□□□□□ -1.61
USP54-202ENST00000413442 OR11H1Q8NG94 326 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 OR1L6Q8NGR2 347 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 ZFAND1Q8TCF1 268 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 ABHD5Q8WTS1 349 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 TCTEX1D2Q8WW35 142 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 MAFIPQ8WZ33 124 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 MOB3AQ96BX8 217 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 ELOVL1Q9BW60 279 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 SIGLEC8Q9NYZ4 499 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 COMMD9Q9P000 198 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 RSL24D1Q9UHA3 163 aaKnown RBP4.98□□□□□ -1.61
USP54-202ENST00000413442 LINC00527Q9UJ94 153 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 ELF5Q9UKW6 265 aaPredicted RBP4.98□□□□□ -1.61
USP54-202ENST00000413442 ZNF257Q9Y2Q1 563 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 WSB1Q9Y6I7 421 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 A3GALT2U3KPV4 340 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 WNK1Q9H4A3 2382 aa4.98□□□□□ -1.61
USP54-202ENST00000413442 NBEAL1Q6ZS30 2694 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 MSGN1A6NI15 193 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 SRRM4A7MD48 611 aaKnown RBP4.97□□□□□ -1.61
USP54-202ENST00000413442 NPIPB5A8MRT5 1133 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 FAM25AB3EWG3 89 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 FAM25CB3EWG5 89 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 FAM25GB3EWG6 89 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 LINC01619G3V211 115 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 G3V318 75 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 G3V4G9 280 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 GABARAPH6UMI1 98 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 GPR31O00270 319 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 PGLYRP1O75594 196 aaPredicted RBP4.97□□□□□ -1.61
USP54-202ENST00000413442 KBTBD11O94819 623 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 CRYGCP07315 174 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 IL6RP08887 468 aaPredicted RBP4.97□□□□□ -1.61
USP54-202ENST00000413442 OR9G9P0C7N8 305 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 ELK1P19419 428 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 GNRHRP30968 328 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 RPL8P62917 257 aaKnown RBP4.97□□□□□ -1.61
USP54-202ENST00000413442 SURF2Q15527 256 aaPredicted RBP4.97□□□□□ -1.61
USP54-202ENST00000413442 OXLD1Q5BKU9 147 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 FOXB2Q5VYV0 432 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 ZNF343Q6P1L6 599 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 C10orf99Q6UWK7 81 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 ETV3LQ6ZN32 361 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 C8orf86Q6ZUL3 223 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 SLC38A6Q8IZM9 456 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 SPAG16Q8N0X2 631 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 GVQW1Q8N7I0 195 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 NECAP1Q8NC96 275 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 SECTM1Q8WVN6 248 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 SRSF12Q8WXF0 261 aaKnown RBP4.97□□□□□ -1.61
USP54-202ENST00000413442 SNAPC3Q92966 411 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 RAX2Q96IS3 184 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 SCGB3A2Q96PL1 93 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms