RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 U3KQ87 197 aa4.43□□□□□ -1.7
CBX1P3-201ENST00000413296 BDP1A6H8Y1 2624 aa4.43□□□□□ -1.7
CBX1P3-201ENST00000413296 BAHCC1Q9P281 2608 aa4.43□□□□□ -1.7
CBX1P3-201ENST00000413296 C2orf16Q68DN1 1984 aa4.43□□□□□ -1.7
CBX1P3-201ENST00000413296 SPTBN5Q9NRC6 3674 aaKnown RBP4.43□□□□□ -1.7
CBX1P3-201ENST00000413296 RBBP6Q7Z6E9 1792 aaKnown RBP4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 MYH15Q9Y2K3 1946 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 C5orf63A6NC05 138 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 ISLRO14498 428 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 SOCS2O14508 198 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 RGS5O15539 181 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 TCF21O43680 179 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 FAM107AO95990 144 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 TOMM40O96008 361 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 OR4Q2P0C623 313 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 METTL15P1P0C7V9 234 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 CHTF8P0CG12 524 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 HOXA5P20719 270 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 RPS3P23396 243 aaKnown RBP eCLIP4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 GATA2P23769 480 aaPredicted RBP4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 CNTFRP26992 372 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 RPL23P62829 140 aaKnown RBP4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 TNFAIP6P98066 277 aaPredicted RBP4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 FABP9Q0Z7S8 132 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 NHLRC3Q5JS37 347 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 TCF23Q7RTU1 214 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 SGPP2Q8IWX5 399 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 TMEM75Q8N9X5 138 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 ZNF524Q96C55 264 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 STARD4Q96DR4 205 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 Q9H3A6 140 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 CDC42EP4Q9H3Q1 356 aaKnown RBP4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 MUC3AQ02505 3323 aa4.42□□□□□ -1.7
CBX1P3-201ENST00000413296 MYH2Q9UKX2 1941 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 LAMB2P55268 1798 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 MEIKINA0A087WXM9 373 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 OR4C45A6NMZ5 311 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 PIAS1O75925 651 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 DUSP14O95147 198 aaKnown RBP4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 CTSEP14091 401 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 VEGFCP49767 419 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 TAF6P49848 677 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 ZNF140P52738 457 aaPredicted RBP4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 HERVK_113P61574 105 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 EGFEM1PQ0D2K5 195 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 HTR4Q13639 388 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 RUNX3Q13761 415 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 NEDD8Q15843 81 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 SSX1Q16384 188 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 ZNF239Q16600 458 aaKnown RBP4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 PRR30Q53SZ7 412 aaPredicted RBP4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 ZNF613Q6PF04 617 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 SHISA6Q6ZSJ9 500 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 LINC00596Q86U02 117 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 MDP1Q86V88 176 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 TMEM86AQ8N2M4 240 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 DRAM1Q8N682 238 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 SLC30A7Q8NEW0 376 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 OR2T27Q8NH04 317 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 NPRL2Q8WTW4 380 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 ACOT12Q8WYK0 555 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 DCUN1D4Q92564 292 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 RPUSD4Q96CM3 377 aaKnown RBP4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 CHCHD5Q9BSY4 110 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 PAXXQ9BUH6 204 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 ZNF436Q9C0F3 470 aaPredicted RBP4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 PARP12Q9H0J9 701 aaKnown RBP4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 JPT2Q9H910 190 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 POPDC3Q9HBV1 291 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 SLC23A2Q9UGH3 650 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 KLK13Q9UKR3 277 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 ANAPC10Q9UM13 185 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 FLVCR1Q9Y5Y0 555 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 CHD5Q8TDI0 1954 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 UNC79Q9P2D8 2635 aa4.41□□□□□ -1.7
CBX1P3-201ENST00000413296 ROBO3Q96MS0 1386 aa4.4□□□□□ -1.7
CBX1P3-201ENST00000413296 BAZ2AQ9UIF9 1905 aaKnown RBP4.4□□□□□ -1.7
CBX1P3-201ENST00000413296 CACNA1BQ00975 2339 aa4.4□□□□□ -1.7
CBX1P3-201ENST00000413296 FAM92AA1XBS5 289 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 NKX2-6A6NCS4 301 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 RIIAD1A6NNX1 92 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 TMEM250H0YL14 139 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 PIRO00625 290 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 PEX7O00628 323 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 MRASO14807 208 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 SLC37A4O43826 429 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 COX7A2P2O60397 106 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 RAMP2O60895 175 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 ZNF682O95780 498 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 BGLAPP02818 100 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 GYPCP04921 128 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 SOD3P08294 240 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 ZSCAN5DPP0CG00 497 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 SCGB1C2P0DMR2 95 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 PGAM2P15259 253 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 NPY1RP25929 384 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 G6PCP35575 357 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 PSMB3P49720 205 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 LHX2P50458 406 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 POLR2HP52434 150 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms