RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 REEP1Q9H902 201 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 HRASLSQ9HDD0 168 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 RPS10P5Q9NQ39 176 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 MEPEQ9NQ76 525 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-202ENST00000409915 PARP11Q9NR21 331 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 DKK2Q9UBU2 259 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 ST3GAL6Q9Y274 331 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 EXOSC1Q9Y3B2 195 aaKnown RBP3.79□□□□□ -1.8
SF3B1-202ENST00000409915 ITPR2Q14571 2701 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 POLQO75417 2590 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 APCP25054 2843 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 HCFC1P51610 2035 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 IGKV3D-15A0A087WSY6 115 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 FXYD6-FXYD2A0A087WZ82 144 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 IGHV2OR16-5A0A0B4J2B6 119 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 TRBV4-1A0A0J9YWV2 114 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 A0A1B0GUS0 222 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 A0A1W2PR80 420 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 A0A1W2PRD5 423 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 GABARAPH6UMI1 98 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 TRAF3IP2O43734 574 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-202ENST00000409915 CHST1O43916 411 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 HSBP1O75506 76 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 CA1P00915 261 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-202ENST00000409915 EIF4EP06730 217 aaKnown RBP3.78□□□□□ -1.8
SF3B1-202ENST00000409915 CD37P11049 281 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 TPT1P13693 172 aaKnown RBP3.78□□□□□ -1.8
SF3B1-202ENST00000409915 FABP4P15090 132 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 IGHV1-2P23083 117 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 ZFP36P26651 326 aaKnown RBP3.78□□□□□ -1.8
SF3B1-202ENST00000409915 CEACAM3P40198 252 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 AQP2P41181 271 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 OR3A2P47893 321 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 RND2P52198 227 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 LINC00310P59036 64 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 POU3F1Q03052 451 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-202ENST00000409915 ZNF74Q16587 644 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 MIDNQ504T8 468 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 DMRTC1Q5HYR2 192 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 TSPO2Q5TGU0 170 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 ASPHD1Q5U4P2 390 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 LEG1Q6P5S2 330 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 STAC2Q6ZMT1 411 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 AAED1Q7RTV5 226 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 NRMQ8IXM6 262 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 SLC35F2Q8IXU6 374 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 BOD1L2Q8IYS8 172 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 SYS1Q8N2H4 156 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 MTURNQ8N3F0 131 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 MFSD8Q8NHS3 518 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 SLC7A13Q8TCU3 470 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 TMEM239Q8WW34 195 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 TMEM106AQ96A25 262 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 APH1AQ96BI3 265 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 GPR146Q96CH1 333 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 PIK3IP1Q96FE7 263 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 IMMP2LQ96T52 175 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 SLC6A7Q99884 636 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 EMC6Q9BV81 110 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 CHIAQ9BZP6 476 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 FXYD6Q9H0Q3 95 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 RBKSQ9H477 322 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 CST9LQ9H4G1 147 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 AMBNQ9NP70 447 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 SLC7A10Q9NS82 523 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 CBLN4Q9NTU7 201 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 LYRM2Q9NU23 88 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-202ENST00000409915 TMEM242Q9NWH2 141 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 MED29Q9NX70 200 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 TAS2R16Q9NYV7 291 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 SIGLEC8Q9NYZ4 499 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 OR5AC2Q9NZP5 309 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 ABRACLQ9P1F3 81 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 TSSC4Q9Y5U2 329 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-202ENST00000409915 COX11Q9Y6N1 276 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 ENPP4Q9Y6X5 453 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 TEX15Q9BXT5 2789 aa3.78□□□□□ -1.8
SF3B1-202ENST00000409915 FREM1Q5H8C1 2179 aa3.78□□□□□ -1.81
SF3B1-202ENST00000409915 MAST4O15021 2626 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 TRBV24-1A0A075B6N3 115 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 TRAV27A0A087WT01 109 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 A0A087WUU8 490 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 A0A0G2JK05 382 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 TMEM272A0A1B0GTI8 110 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 A0A1W2PPR1 153 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 TVP23AA6NH52 213 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 OR5H14A6NHG9 310 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 ZNF705EA8MWA4 302 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-202ENST00000409915 C9JQL5 133 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 C16orf97H3BN30 126 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 PLPP3O14495 311 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 CDC42EP2O14613 210 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 MRPL33O75394 65 aaKnown RBP3.77□□□□□ -1.81
SF3B1-202ENST00000409915 ATP5LO75964 103 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 FARS2O95363 451 aaKnown RBP3.77□□□□□ -1.81
SF3B1-202ENST00000409915 RAB36O95755 333 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 TSPAN13O95857 204 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 H2BFMP0C1H6 154 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 ASAH2BP0C7U1 165 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 OR13C7P0DN81 318 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms