RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 KIR2DL5BQ8NHK3 375 aa12.33□□□□□ -0.44
CHMP3-203ENST00000409225 C12orf4Q9NQ89 552 aa12.33□□□□□ -0.44
CHMP3-203ENST00000409225 IRGMA1A4Y4 181 aa12.32□□□□□ -0.44
CHMP3-203ENST00000409225 TRDCB7Z8K6 153 aa12.32□□□□□ -0.44
CHMP3-203ENST00000409225 BET1O15155 118 aa12.32□□□□□ -0.44
CHMP3-203ENST00000409225 SAA1P0DJI8 122 aaPredicted RBP12.32□□□□□ -0.44
CHMP3-203ENST00000409225 SRMP19623 302 aa12.32□□□□□ -0.44
CHMP3-203ENST00000409225 ZNF585BQ52M93 769 aa12.32□□□□□ -0.44
CHMP3-203ENST00000409225 ZNF485Q8NCK3 441 aa12.32□□□□□ -0.44
CHMP3-203ENST00000409225 ZNF257Q9Y2Q1 563 aa12.32□□□□□ -0.44
CHMP3-203ENST00000409225 MUC4Q99102 2169 aa12.31□□□□□ -0.44
CHMP3-203ENST00000409225 TMEM14DPA8MWL7 114 aa12.31□□□□□ -0.44
CHMP3-203ENST00000409225 XRCC3O43542 346 aa12.31□□□□□ -0.44
CHMP3-203ENST00000409225 CIB2O75838 187 aa12.31□□□□□ -0.44
CHMP3-203ENST00000409225 MAPK3P27361 379 aaPredicted RBP12.31□□□□□ -0.44
CHMP3-203ENST00000409225 TAS2R43P59537 309 aa12.31□□□□□ -0.44
CHMP3-203ENST00000409225 QRFPP83859 136 aa12.31□□□□□ -0.44
CHMP3-203ENST00000409225 MED21Q13503 144 aa12.31□□□□□ -0.44
CHMP3-203ENST00000409225 C1orf100Q5SVJ3 147 aa12.31□□□□□ -0.44
CHMP3-203ENST00000409225 UNQ9165/PRO28630Q6UXU0 137 aa12.31□□□□□ -0.44
CHMP3-203ENST00000409225 LINC00336Q6ZUF6 198 aa12.31□□□□□ -0.44
CHMP3-203ENST00000409225 C11orf45Q8TAV5 145 aa12.31□□□□□ -0.44
CHMP3-203ENST00000409225 C2CD4CQ8TF44 421 aa12.31□□□□□ -0.44
CHMP3-203ENST00000409225 TMEM80Q96HE8 168 aa12.31□□□□□ -0.44
CHMP3-203ENST00000409225 CMSS1Q9BQ75 279 aaKnown RBP12.31□□□□□ -0.44
CHMP3-203ENST00000409225 LPAR5Q9H1C0 372 aa12.31□□□□□ -0.44
CHMP3-203ENST00000409225 A0A1B0GVY2 172 aa12.3□□□□□ -0.44
CHMP3-203ENST00000409225 DPPA5A6NC42 116 aa12.3□□□□□ -0.44
CHMP3-203ENST00000409225 TEX22C9J3V5 150 aa12.3□□□□□ -0.44
CHMP3-203ENST00000409225 CREBL2O60519 120 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-203ENST00000409225 CELP19835 753 aa12.3□□□□□ -0.44
CHMP3-203ENST00000409225 SERPINB10P48595 397 aa12.3□□□□□ -0.44
CHMP3-203ENST00000409225 TPBGQ13641 420 aa12.3□□□□□ -0.44
CHMP3-203ENST00000409225 INSL4Q14641 139 aa12.3□□□□□ -0.44
CHMP3-203ENST00000409225 CDK10Q15131 360 aa12.3□□□□□ -0.44
CHMP3-203ENST00000409225 IGSF11Q5DX21 431 aa12.3□□□□□ -0.44
CHMP3-203ENST00000409225 LRRTM1Q86UE6 522 aa12.3□□□□□ -0.44
CHMP3-203ENST00000409225 MMD2Q8IY49 270 aa12.3□□□□□ -0.44
CHMP3-203ENST00000409225 EEF1AKMT3Q96AZ1 226 aa12.3□□□□□ -0.44
CHMP3-203ENST00000409225 MFFQ9GZY8 342 aa12.3□□□□□ -0.44
CHMP3-203ENST00000409225 RBM7Q9Y580 266 aaKnown RBP12.3□□□□□ -0.44
CHMP3-203ENST00000409225 LINC00473A8K010 186 aa12.29□□□□□ -0.44
CHMP3-203ENST00000409225 FABP7O15540 132 aa12.29□□□□□ -0.44
CHMP3-203ENST00000409225 S1PR2O95136 353 aa12.29□□□□□ -0.44
CHMP3-203ENST00000409225 C8orf88P0DMB2 117 aa12.29□□□□□ -0.44
CHMP3-203ENST00000409225 DUTP33316 252 aaKnown RBP12.29□□□□□ -0.44
CHMP3-203ENST00000409225 MED22Q15528 200 aa12.29□□□□□ -0.44
CHMP3-203ENST00000409225 ODF3L2Q3SX64 289 aa12.29□□□□□ -0.44
CHMP3-203ENST00000409225 RBM48Q5RL73 367 aaKnown RBP12.29□□□□□ -0.44
CHMP3-203ENST00000409225 TTC23Q5W5X9 447 aa12.29□□□□□ -0.44
CHMP3-203ENST00000409225 OR4A4PQ8NGN8 299 aa12.29□□□□□ -0.44
CHMP3-203ENST00000409225 OR10J5Q8NHC4 309 aa12.29□□□□□ -0.44
CHMP3-203ENST00000409225 OSR1Q8TAX0 266 aaPredicted RBP12.29□□□□□ -0.44
CHMP3-203ENST00000409225 MARC2Q969Z3 335 aa12.29□□□□□ -0.44
CHMP3-203ENST00000409225 ARHGAP5-AS1Q96IT6 56 aa12.29□□□□□ -0.44
CHMP3-203ENST00000409225 FANCD2OSQ96PS1 177 aa12.29□□□□□ -0.44
CHMP3-203ENST00000409225 SPAG8Q99932 426 aaPredicted RBP12.29□□□□□ -0.44
CHMP3-203ENST00000409225 DCUN1D5Q9BTE7 237 aa12.29□□□□□ -0.44
CHMP3-203ENST00000409225 URM1Q9BTM9 101 aaKnown RBP12.29□□□□□ -0.44
CHMP3-203ENST00000409225 PECRQ9BY49 303 aa12.29□□□□□ -0.44
CHMP3-203ENST00000409225 MAP6D1Q9H9H5 199 aa12.29□□□□□ -0.44
CHMP3-203ENST00000409225 MRPL27Q9P0M9 148 aaKnown RBP12.29□□□□□ -0.44
CHMP3-203ENST00000409225 HSF4Q9ULV5 492 aa12.29□□□□□ -0.44
CHMP3-203ENST00000409225 IGHV3-35A0A0C4DH35 117 aa12.28□□□□□ -0.44
CHMP3-203ENST00000409225 NPIPB5A8MRT5 1133 aa12.28□□□□□ -0.44
CHMP3-203ENST00000409225 BPNT1O95861 308 aa12.28□□□□□ -0.44
CHMP3-203ENST00000409225 TMEM50BP56557 158 aa12.28□□□□□ -0.44
CHMP3-203ENST00000409225 OR6M1Q8NGM8 313 aa12.28□□□□□ -0.44
CHMP3-203ENST00000409225 OR5B3Q8NH48 314 aa12.28□□□□□ -0.44
CHMP3-203ENST00000409225 GALNT14Q96FL9 552 aa12.28□□□□□ -0.44
CHMP3-203ENST00000409225 ADTRPQ96IZ2 230 aa12.28□□□□□ -0.44
CHMP3-203ENST00000409225 FYTTD1Q96QD9 318 aaKnown RBP12.28□□□□□ -0.44
CHMP3-203ENST00000409225 RARRES2Q99969 163 aa12.28□□□□□ -0.44
CHMP3-203ENST00000409225 C9orf16Q9BUW7 83 aa12.28□□□□□ -0.44
CHMP3-203ENST00000409225 APLNQ9ULZ1 77 aa12.28□□□□□ -0.44
CHMP3-203ENST00000409225 FOXI3A8MTJ6 420 aaPredicted RBP12.27□□□□□ -0.45
CHMP3-203ENST00000409225 IGLL5B9A064 214 aa12.27□□□□□ -0.45
CHMP3-203ENST00000409225 CLEC3BP05452 202 aa12.27□□□□□ -0.45
CHMP3-203ENST00000409225 IL6RP08887 468 aaPredicted RBP12.27□□□□□ -0.45
CHMP3-203ENST00000409225 TCTAP57738 103 aa12.27□□□□□ -0.45
CHMP3-203ENST00000409225 P2RY14Q15391 338 aa12.27□□□□□ -0.45
CHMP3-203ENST00000409225 FAM89BQ8N5H3 189 aa12.27□□□□□ -0.45
CHMP3-203ENST00000409225 CABLES2Q9BTV7 478 aa12.27□□□□□ -0.45
CHMP3-203ENST00000409225 KRTAP4-5Q9BYR2 181 aa12.27□□□□□ -0.45
CHMP3-203ENST00000409225 C5orf66Q9H5L9 145 aa12.27□□□□□ -0.45
CHMP3-203ENST00000409225 UFC1Q9Y3C8 167 aa12.27□□□□□ -0.45
CHMP3-203ENST00000409225 TRBV6-7A0A0A0MS04 114 aa12.26□□□□□ -0.45
CHMP3-203ENST00000409225 MFSD2BA6NFX1 497 aa12.26□□□□□ -0.45
CHMP3-203ENST00000409225 E7EUB6 86 aa12.26□□□□□ -0.45
CHMP3-203ENST00000409225 TSPAN4O14817 238 aa12.26□□□□□ -0.45
CHMP3-203ENST00000409225 CD1AP06126 327 aa12.26□□□□□ -0.45
CHMP3-203ENST00000409225 GSTT2P0CG29 244 aa12.26□□□□□ -0.45
CHMP3-203ENST00000409225 GSTT2BP0CG30 244 aa12.26□□□□□ -0.45
CHMP3-203ENST00000409225 GALP22466 123 aa12.26□□□□□ -0.45
CHMP3-203ENST00000409225 RPL27AP46776 148 aaKnown RBP12.26□□□□□ -0.45
CHMP3-203ENST00000409225 RASSF2P50749 326 aa12.26□□□□□ -0.45
CHMP3-203ENST00000409225 ACSM3Q53FZ2 586 aa12.26□□□□□ -0.45
CHMP3-203ENST00000409225 VKORC1L1Q8N0U8 176 aa12.26□□□□□ -0.45
CHMP3-203ENST00000409225 GVQW1Q8N7I0 195 aa12.26□□□□□ -0.45
CHMP3-203ENST00000409225 ZNF555Q8NEP9 628 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms