RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SLC7A6Q92536 515 aa3.14□□□□□ -1.91
HMGB3P18-201ENST00000406327 HGDQ93099 445 aa3.14□□□□□ -1.91
HMGB3P18-201ENST00000406327 ITFG2Q969R8 447 aa3.14□□□□□ -1.91
HMGB3P18-201ENST00000406327 ZNF799Q96GE5 643 aa3.14□□□□□ -1.91
HMGB3P18-201ENST00000406327 DERL3Q96Q80 235 aa3.14□□□□□ -1.91
HMGB3P18-201ENST00000406327 TIMM17AQ99595 171 aa3.14□□□□□ -1.91
HMGB3P18-201ENST00000406327 CDX2Q99626 313 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P18-201ENST00000406327 HSD17B10Q99714 261 aaKnown RBP3.14□□□□□ -1.91
HMGB3P18-201ENST00000406327 CTRCQ99895 268 aa3.14□□□□□ -1.91
HMGB3P18-201ENST00000406327 HDHD2Q9H0R4 259 aa3.14□□□□□ -1.91
HMGB3P18-201ENST00000406327 SYT4Q9H2B2 425 aa3.14□□□□□ -1.91
HMGB3P18-201ENST00000406327 TXNIPQ9H3M7 391 aa3.14□□□□□ -1.91
HMGB3P18-201ENST00000406327 MRM2Q9UI43 246 aaKnown RBP3.14□□□□□ -1.91
HMGB3P18-201ENST00000406327 TMEM14AQ9Y6G1 99 aa3.14□□□□□ -1.91
HMGB3P18-201ENST00000406327 U3KQA8 63 aa3.14□□□□□ -1.91
HMGB3P18-201ENST00000406327 PLXND1Q9Y4D7 1925 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 IGLV3-32A0A0A0MS00 114 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 IGHV1-69DA0A0B4J2H0 117 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 TMEM212A6NML5 194 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 CENPBD1B2RD01 187 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 FTCDNL1E5RQL4 147 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 INMT-MINDY4F8WBC2 141 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 H7C2Y5 167 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 PANO1I0J062 215 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 AIPO00170 330 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 PHYHO14832 338 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 YKT6O15498 198 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 EEF1E1O43324 174 aaKnown RBP3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 SULT1B1O43704 296 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 GATCO43716 136 aaKnown RBP3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 SLC22A5O76082 557 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 AHSA1O95433 338 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 GCGP01275 180 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 SRP9P49458 86 aaKnown RBP3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 NKX2-5P52952 324 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 SLAQ13239 276 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 STK11Q15831 433 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 Q499Y3 187 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 GCSAMLQ5JQS6 135 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 UBE2NLQ5JXB2 153 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 TMEM205Q6UW68 189 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 ASCL4Q6XD76 172 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 C16orf47Q6ZP98 133 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 CALHM1Q8IU99 346 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 TCTE3Q8IZS6 198 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 TOMM5Q8N4H5 51 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 ZNF433Q8N7K0 673 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 Q8N7P7 452 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 WDR31Q8NA23 367 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 OR6N2Q8NGY6 317 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 MFSD8Q8NHS3 518 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 OTOSQ8NHW6 89 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 BAALCQ8WXS3 180 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 YIPF5Q969M3 257 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 ZFP3Q96NJ6 502 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 UQCC2Q9BRT2 126 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 POTEKPQ9BYX7 375 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 ABCG5Q9H222 651 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 SDHAF3Q9NRP4 125 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 MED11Q9P086 117 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 ZMAT5Q9UDW3 170 aaKnown RBP3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 OR5V1Q9UGF6 321 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 OR51B2Q9Y5P1 312 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 ALG5Q9Y673 324 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 SCN2AQ99250 2005 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 NUP214P35658 2090 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 NUMA1Q14980 2115 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 PDE4DIPQ5VU43 2346 aa3.13□□□□□ -1.91
HMGB3P18-201ENST00000406327 IGLV4-69A0A075B6H9 119 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 TRAV8-7A0A075B6U6 113 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 A0A096LNJ9 63 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 A0A0J9YXV3 536 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 C7orf66A4D0T2 115 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 NAP1L6A6NFF2 107 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 DNASE2O00115 360 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 GPR171O14626 319 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 TAAR5O14804 337 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 OR2J2O76002 312 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 MPZL1O95297 269 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 DHFRP00374 187 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 C1QBP02746 253 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 MAS1P04201 325 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 TCRBP04435 133 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 CTLA4P16410 223 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 CSRP1P21291 193 aaKnown RBP3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 CRABP1P29762 137 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 ERP29P30040 261 aaKnown RBP3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 RPS27P42677 84 aaKnown RBP3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 KIR3DL2P43630 455 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 RAB25P57735 213 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 RRAS2P62070 204 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 RPL18AQ02543 176 aaKnown RBP3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 GLO1Q04760 184 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 CDK10Q15131 360 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 BCL2A1Q16548 175 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 NDUFA5Q16718 116 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 TEX30Q5JUR7 227 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 LRRN1Q6UXK5 716 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 SH2D6Q7Z4S9 175 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 ARRDC1Q8N5I2 433 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms