RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 KIAA1456Q9P272 454 aa4.83□□□□□ -1.64
RPA3-204ENST00000406109 ZMAT5Q9UDW3 170 aaKnown RBP4.83□□□□□ -1.64
RPA3-204ENST00000406109 LINC00527Q9UJ94 153 aa4.83□□□□□ -1.64
RPA3-204ENST00000406109 WASHC3Q9Y3C0 194 aa4.83□□□□□ -1.64
RPA3-204ENST00000406109 HSPG2P98160 4391 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 DPPA5A6NC42 116 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 FABP12A6NFH5 140 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 CCL24O00175 119 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 RRHO14718 337 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 NBR2O15453 112 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 TNFSF12O43508 249 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 PPYP01298 95 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 IGHG2P01859 326 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 IGKV1-16P04430 117 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 RRASP10301 218 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 NAT1P18440 290 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 SLC6A1P30531 599 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 TNFSF8P32971 234 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 DUTP33316 252 aaKnown RBP4.82□□□□□ -1.64
RPA3-204ENST00000406109 RCVRNP35243 200 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 HRH1P35367 487 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 ECI1P42126 302 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 HERV-K104P61576 105 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 TAGLNQ01995 201 aaKnown RBP4.82□□□□□ -1.64
RPA3-204ENST00000406109 DYRK1AQ13627 763 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 PSG5Q15238 335 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 RTL8BQ17RB0 113 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 DEFB136Q30KP8 78 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 OR2B11Q5JQS5 317 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 ZFAND6Q6FIF0 208 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 PYHIN1Q6K0P9 492 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 OVCH2Q7RTZ1 564 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 PDPNQ86YL7 162 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 FOXRED2Q8IWF2 684 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 MFSD4AQ8N468 514 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 KLHL30-AS1Q8NEE0 82 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 NPBQ8NG41 125 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 DGCR14Q96DF8 476 aaKnown RBP4.82□□□□□ -1.64
RPA3-204ENST00000406109 C5orf30Q96GV9 206 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 ADTRPQ96IZ2 230 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 CITED4Q96RK1 184 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 GPHA2Q96T91 129 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 TSNAXQ99598 290 aaKnown RBP4.82□□□□□ -1.64
RPA3-204ENST00000406109 RNF5Q99942 180 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 ZNF2Q9BSG1 426 aaPredicted RBP4.82□□□□□ -1.64
RPA3-204ENST00000406109 SLIRPQ9GZT3 109 aaKnown RBP4.82□□□□□ -1.64
RPA3-204ENST00000406109 FBXL15Q9H469 300 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 ZFP57Q9NU63 452 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 LIN7CQ9NUP9 197 aaKnown RBP4.82□□□□□ -1.64
RPA3-204ENST00000406109 TAS2R8Q9NYW2 309 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 METTL1Q9UBP6 276 aaKnown RBP4.82□□□□□ -1.64
RPA3-204ENST00000406109 KLK11Q9UBX7 282 aa4.82□□□□□ -1.64
RPA3-204ENST00000406109 ZNF107Q9UII5 783 aaPredicted RBP4.82□□□□□ -1.64
RPA3-204ENST00000406109 RBMX2Q9Y388 322 aaKnown RBP4.82□□□□□ -1.64
RPA3-204ENST00000406109 LINC00473A8K010 186 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 GABARAPH6UMI1 98 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 M0QYG6 137 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 ZNF701M0R085 212 aaPredicted RBP4.81□□□□□ -1.64
RPA3-204ENST00000406109 AP4M1O00189 453 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 FCN1O00602 326 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 SHOXO15266 292 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 FCGR3BO75015 233 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 TPPPO94811 219 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 CNIH1O95406 144 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 CRYZL1O95825 349 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 IGLV2-14P01704 120 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 IFNA6P05013 189 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 RPLP1P05386 114 aaKnown RBP4.81□□□□□ -1.64
RPA3-204ENST00000406109 S100A5P33763 92 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 LGALS7P47929 136 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 GNB1P62873 340 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 RPL30P62888 115 aaKnown RBP4.81□□□□□ -1.64
RPA3-204ENST00000406109 SLC35B1P78383 322 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 C5orf64Q2M2E5 130 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 TMEM177Q53S58 311 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 ZNF66Q6ZN08 573 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 LCNL1Q6ZST4 164 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 TMEM17Q86X19 198 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 ZNF695Q8IW36 515 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 FAM71E2Q8N5Q1 922 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 ABHD5Q8WTS1 349 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 CHPT1Q8WUD6 406 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 TCTEX1D2Q8WW35 142 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 HSD17B10Q99714 261 aaKnown RBP4.81□□□□□ -1.64
RPA3-204ENST00000406109 HSPB9Q9BQS6 159 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 NXF2Q9GZY0 626 aaKnown RBP4.81□□□□□ -1.64
RPA3-204ENST00000406109 RBM38Q9H0Z9 239 aaKnown RBP4.81□□□□□ -1.64
RPA3-204ENST00000406109 EDA2RQ9HAV5 297 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 PARP11Q9NR21 331 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 NDUFA13Q9P0J0 144 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 ANAPC10Q9UM13 185 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 PRELID3BQ9Y3B1 194 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 WSB1Q9Y6I7 421 aa4.81□□□□□ -1.64
RPA3-204ENST00000406109 IGHV7-81A0A0B4J1V7 117 aa4.8□□□□□ -1.64
RPA3-204ENST00000406109 SRRM4A7MD48 611 aaKnown RBP4.8□□□□□ -1.64
RPA3-204ENST00000406109 NUDT19A8MXV4 375 aa4.8□□□□□ -1.64
RPA3-204ENST00000406109 SEC14L6B5MCN3 397 aa4.8□□□□□ -1.64
RPA3-204ENST00000406109 CTDSPLO15194 276 aa4.8□□□□□ -1.64
RPA3-204ENST00000406109 SLC25A17O43808 307 aa4.8□□□□□ -1.64
RPA3-204ENST00000406109 PGLYRP1O75594 196 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms