RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 TAF15Q92804 592 aaKnown RBP eCLIP19.73■□□□□ 0.75
PABPN1-202ENST00000397276 CISD1Q9NZ45 108 aaKnown RBP19.73■□□□□ 0.75
PABPN1-202ENST00000397276 PTPRZ1P23471 2315 aaPredicted RBP19.73■□□□□ 0.75
PABPN1-202ENST00000397276 FCGR3BO75015 233 aa19.73■□□□□ 0.75
PABPN1-202ENST00000397276 P0C879 139 aa19.73■□□□□ 0.75
PABPN1-202ENST00000397276 MARCH11A6NNE9 402 aa19.72■□□□□ 0.75
PABPN1-202ENST00000397276 USF2Q15853 346 aaPredicted RBP19.72■□□□□ 0.75
PABPN1-202ENST00000397276 PRSS8Q16651 343 aa19.72■□□□□ 0.75
PABPN1-202ENST00000397276 DPPA3Q6W0C5 159 aa19.72■□□□□ 0.75
PABPN1-202ENST00000397276 DEFB108BQ8NET1 73 aa19.72■□□□□ 0.75
PABPN1-202ENST00000397276 PRSS33Q8NF86 280 aa19.72■□□□□ 0.75
PABPN1-202ENST00000397276 PITPNC1Q9UKF7 332 aa19.72■□□□□ 0.75
PABPN1-202ENST00000397276 ZNF705GA8MUZ8 300 aaPredicted RBP19.72■□□□□ 0.75
PABPN1-202ENST00000397276 CLDN14O95500 239 aa19.72■□□□□ 0.75
PABPN1-202ENST00000397276 ADIRFQ15847 76 aa19.72■□□□□ 0.75
PABPN1-202ENST00000397276 RPL39P5Q59GN2 51 aa19.72■□□□□ 0.75
PABPN1-202ENST00000397276 DUX4L9Q6RFH8 374 aaPredicted RBP19.72■□□□□ 0.75
PABPN1-202ENST00000397276 VKORC1L1Q8N0U8 176 aa19.72■□□□□ 0.75
PABPN1-202ENST00000397276 ADGRG4Q8IZF6 3080 aa19.72■□□□□ 0.75
PABPN1-202ENST00000397276 PIEZO2Q9H5I5 2752 aa19.72■□□□□ 0.75
PABPN1-202ENST00000397276 GZMHP20718 246 aa19.72■□□□□ 0.75
PABPN1-202ENST00000397276 GLRXP35754 106 aa19.72■□□□□ 0.75
PABPN1-202ENST00000397276 ZNF124Q15973 351 aa19.72■□□□□ 0.75
PABPN1-202ENST00000397276 MORN2Q502X0 79 aa19.72■□□□□ 0.75
PABPN1-202ENST00000397276 TGIF2LXQ8IUE1 241 aa19.72■□□□□ 0.75
PABPN1-202ENST00000397276 ADH4P08319 380 aa19.71■□□□□ 0.75
PABPN1-202ENST00000397276 ZNF134P52741 427 aa19.71■□□□□ 0.75
PABPN1-202ENST00000397276 FAM169BQ8N8A8 192 aa19.71■□□□□ 0.75
PABPN1-202ENST00000397276 TRBV24-1A0A075B6N3 115 aa19.71■□□□□ 0.75
PABPN1-202ENST00000397276 TRAV1-1A0A0B4J248 108 aa19.71■□□□□ 0.75
PABPN1-202ENST00000397276 A0A1B0GWJ7 208 aa19.71■□□□□ 0.75
PABPN1-202ENST00000397276 HTD2P86397 168 aa19.71■□□□□ 0.75
PABPN1-202ENST00000397276 RTP5Q14D33 572 aa19.71■□□□□ 0.75
PABPN1-202ENST00000397276 JOSD1Q15040 202 aaPredicted RBP19.71■□□□□ 0.75
PABPN1-202ENST00000397276 OR10A7Q8NGE5 316 aa19.71■□□□□ 0.75
PABPN1-202ENST00000397276 OR10G4Q8NGN3 311 aa19.71■□□□□ 0.75
PABPN1-202ENST00000397276 HSD17B10Q99714 261 aaKnown RBP19.71■□□□□ 0.75
PABPN1-202ENST00000397276 MRPL37Q9BZE1 423 aaKnown RBP19.71■□□□□ 0.75
PABPN1-202ENST00000397276 SH3BGRL2Q9UJC5 107 aa19.71■□□□□ 0.75
PABPN1-202ENST00000397276 A8MWP6 167 aa19.7■□□□□ 0.74
PABPN1-202ENST00000397276 SSX2Q16385 188 aa19.7■□□□□ 0.74
PABPN1-202ENST00000397276 ZNF66Q6ZN08 573 aa19.7■□□□□ 0.74
PABPN1-202ENST00000397276 TMEM183AQ8IXX5 376 aa19.7■□□□□ 0.74
PABPN1-202ENST00000397276 C1orf174Q8IYL3 243 aa19.7■□□□□ 0.74
PABPN1-202ENST00000397276 PSMG3Q9BT73 122 aaPredicted RBP19.7■□□□□ 0.74
PABPN1-202ENST00000397276 ELOVL1Q9BW60 279 aa19.7■□□□□ 0.74
PABPN1-202ENST00000397276 QTRT1Q9BXR0 403 aaKnown RBP19.7■□□□□ 0.74
PABPN1-202ENST00000397276 M0R1X1 148 aa19.7■□□□□ 0.74
PABPN1-202ENST00000397276 MGST3O14880 152 aa19.7■□□□□ 0.74
PABPN1-202ENST00000397276 IGKV1D-33P01593 117 aa19.7■□□□□ 0.74
PABPN1-202ENST00000397276 IGKV1-33P01594 117 aa19.7■□□□□ 0.74
PABPN1-202ENST00000397276 C16orf82Q7Z2V1 217 aa19.7■□□□□ 0.74
PABPN1-202ENST00000397276 R3HDM4Q96D70 268 aa19.7■□□□□ 0.74
PABPN1-202ENST00000397276 TMEM242Q9NWH2 141 aa19.7■□□□□ 0.74
PABPN1-202ENST00000397276 LAMP3Q9UQV4 416 aa19.7■□□□□ 0.74
PABPN1-202ENST00000397276 ANKRD11Q6UB99 2663 aaPredicted RBP19.7■□□□□ 0.74
PABPN1-202ENST00000397276 RAB29O14966 203 aa19.69■□□□□ 0.74
PABPN1-202ENST00000397276 OR9G9P0C7N8 305 aa19.69■□□□□ 0.74
PABPN1-202ENST00000397276 DUTP33316 252 aaKnown RBP19.69■□□□□ 0.74
PABPN1-202ENST00000397276 PNRC1Q12796 327 aaPredicted RBP19.69■□□□□ 0.74
PABPN1-202ENST00000397276 OR5R1Q8NH85 324 aa19.69■□□□□ 0.74
PABPN1-202ENST00000397276 PAX1P15863 534 aa19.69■□□□□ 0.74
PABPN1-202ENST00000397276 SERF2P84101 59 aa19.69■□□□□ 0.74
PABPN1-202ENST00000397276 WFIKKN1Q96NZ8 548 aa19.69■□□□□ 0.74
PABPN1-202ENST00000397276 PLCE1Q9P212 2302 aa19.69■□□□□ 0.74
PABPN1-202ENST00000397276 IFNA10P01566 189 aa19.68■□□□□ 0.74
PABPN1-202ENST00000397276 TMEM41BQ5BJD5 291 aa19.68■□□□□ 0.74
PABPN1-202ENST00000397276 TGIF2LYQ8IUE0 185 aa19.68■□□□□ 0.74
PABPN1-202ENST00000397276 RPP25LQ8N5L8 163 aaKnown RBP19.68■□□□□ 0.74
PABPN1-202ENST00000397276 OR10P1Q8NGE3 313 aa19.68■□□□□ 0.74
PABPN1-202ENST00000397276 PPP1R35Q8TAP8 253 aa19.68■□□□□ 0.74
PABPN1-202ENST00000397276 ATG101Q9BSB4 218 aa19.68■□□□□ 0.74
PABPN1-202ENST00000397276 HIPK2Q9H2X6 1198 aa19.68■□□□□ 0.74
PABPN1-202ENST00000397276 OPN1MWP04001 364 aa19.68■□□□□ 0.74
PABPN1-202ENST00000397276 OPN1MW2P0DN77 364 aa19.68■□□□□ 0.74
PABPN1-202ENST00000397276 OPN1MW3P0DN78 364 aa19.68■□□□□ 0.74
PABPN1-202ENST00000397276 OR1P1Q8NH06 330 aa19.68■□□□□ 0.74
PABPN1-202ENST00000397276 MAP1LC3B2A6NCE7 125 aa19.67■□□□□ 0.74
PABPN1-202ENST00000397276 TFF3Q07654 80 aa19.67■□□□□ 0.74
PABPN1-202ENST00000397276 RPUSD4Q96CM3 377 aaKnown RBP19.67■□□□□ 0.74
PABPN1-202ENST00000397276 SMIM7Q9BQ49 75 aa19.67■□□□□ 0.74
PABPN1-202ENST00000397276 MAP1LC3BQ9GZQ8 125 aa19.67■□□□□ 0.74
PABPN1-202ENST00000397276 XKRY2A2RUG3 117 aa19.67■□□□□ 0.74
PABPN1-202ENST00000397276 CRYABP02511 175 aaKnown RBP19.67■□□□□ 0.74
PABPN1-202ENST00000397276 DEFA4P12838 97 aa19.67■□□□□ 0.74
PABPN1-202ENST00000397276 FGF7P21781 194 aa19.67■□□□□ 0.74
PABPN1-202ENST00000397276 TIMP3P35625 211 aa19.67■□□□□ 0.74
PABPN1-202ENST00000397276 DNLZQ5SXM8 178 aa19.67■□□□□ 0.74
PABPN1-202ENST00000397276 ACSM6Q6P461 480 aa19.67■□□□□ 0.74
PABPN1-202ENST00000397276 TRAT1Q6PIZ9 186 aa19.67■□□□□ 0.74
PABPN1-202ENST00000397276 SLC39A9Q9NUM3 307 aa19.67■□□□□ 0.74
PABPN1-202ENST00000397276 ROS1P08922 2347 aa19.67■□□□□ 0.74
PABPN1-202ENST00000397276 PFN1P07737 140 aaKnown RBP19.66■□□□□ 0.74
PABPN1-202ENST00000397276 SLC25A22Q9H936 323 aa19.66■□□□□ 0.74
PABPN1-202ENST00000397276 ACACAQ13085 2346 aa19.66■□□□□ 0.74
PABPN1-202ENST00000397276 PMS2P5A8MQ11 134 aa19.66■□□□□ 0.74
PABPN1-202ENST00000397276 MKRN2OSH3BPM6 223 aa19.66■□□□□ 0.74
PABPN1-202ENST00000397276 LOXL3P58215 753 aa19.66■□□□□ 0.74
PABPN1-202ENST00000397276 CD81P60033 236 aa19.66■□□□□ 0.74
PABPN1-202ENST00000397276 C1orf229Q6ZS94 237 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms