RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 RTN4IP1Q8WWV3 396 aaPredicted RBP4.49□□□□□ -1.69
VPS41-203ENST00000395969 VKORC1Q9BQB6 163 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 TMEM204Q9BSN7 226 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 ALKBH7Q9BT30 221 aaPredicted RBP4.49□□□□□ -1.69
VPS41-203ENST00000395969 RBKSQ9H477 322 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 PRORYQ9H606 182 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 ZFAND3Q9H8U3 227 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 SLC2A9Q9NRM0 540 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 MTCH1Q9NZJ7 389 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 GNG13Q9P2W3 67 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 NAT8Q9UHE5 227 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 FUT9Q9Y231 359 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 RNF115Q9Y4L5 304 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 PLCE1Q9P212 2302 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 IGHV2OR16-5A0A0B4J2B6 119 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 IGHV1-18A0A0C4DH31 117 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 SERTM2A0A1B0GWG4 89 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 A0A1W2PR80 420 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 ANKRD30BLA7E2S9 258 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 F5H5K5 113 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 J3QL48 77 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 NDUFB8O95169 186 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 PPBPP02775 128 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 KLF3P57682 345 aaPredicted RBP4.48□□□□□ -1.69
VPS41-203ENST00000395969 RPL15P61313 204 aaKnown RBP4.48□□□□□ -1.69
VPS41-203ENST00000395969 RUNX1Q01196 453 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 LDLRAD2Q5SZI1 272 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 FAM71F2Q6NXP2 309 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 PCSK4Q6UW60 755 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 LYG1Q8N1E2 194 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 ZNF611Q8N823 705 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 OR4C5Q8NGB2 326 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 OR5C1Q8NGR4 320 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 MRPL30Q8TCC3 161 aaKnown RBP4.48□□□□□ -1.69
VPS41-203ENST00000395969 NUDT11Q96G61 164 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 ZC2HC1AQ96GY0 325 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 SLC35E1Q96K37 410 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 FAM71F1Q96KD3 344 aaPredicted RBP4.48□□□□□ -1.69
VPS41-203ENST00000395969 PCGF1Q9BSM1 259 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 ELL3Q9HB65 397 aaPredicted RBP4.48□□□□□ -1.69
VPS41-203ENST00000395969 PROCRQ9UNN8 238 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 MED12LQ86YW9 2145 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 MAP1LC3B2A6NCE7 125 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 TOMM40O96008 361 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 BLVRBP30043 206 aaPredicted RBP4.48□□□□□ -1.69
VPS41-203ENST00000395969 SRP14P37108 136 aaKnown RBP4.48□□□□□ -1.69
VPS41-203ENST00000395969 DYNLT3P51808 116 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 ZNF726P1Q15940 193 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 MRPL21Q7Z2W9 205 aaKnown RBP4.48□□□□□ -1.69
VPS41-203ENST00000395969 MYPOPQ86VE0 399 aaPredicted RBP4.48□□□□□ -1.69
VPS41-203ENST00000395969 CALHM1Q8IU99 346 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 SPACA3Q8IXA5 215 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 MRGPRDQ8TDS7 321 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 NEIL1Q96FI4 390 aaPredicted RBP4.48□□□□□ -1.69
VPS41-203ENST00000395969 MAP1LC3BQ9GZQ8 125 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 TMEM106BQ9NUM4 274 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 PCNX2A6NKB5 2137 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 FAM186AA6NE01 2351 aa4.48□□□□□ -1.69
VPS41-203ENST00000395969 TRAV39A0A0B4J263 110 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 TMEM238C9JI98 176 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 NUPR1O60356 82 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 NXPH3O95157 252 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 ZNF728P0DKX0 622 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 ESDP10768 282 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 RPL23P62829 140 aaKnown RBP4.47□□□□□ -1.69
VPS41-203ENST00000395969 ATP1A1-AS1Q5TC04 95 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 UNQ5815/PRO19632Q6UWF5 114 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 NUDT10Q8NFP7 164 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 OR5D13Q8NGL4 314 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 LSM10Q969L4 123 aaKnown RBP4.47□□□□□ -1.69
VPS41-203ENST00000395969 MS4A10Q96PG2 267 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 ATP5SQ99766 215 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 ZNF665Q9H7R5 613 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 ZNF286AQ9HBT8 521 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 TRAV24A0A0B4J272 114 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 ZFP92A6NM28 416 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 SRRM5B3KS81 715 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 H0Y980 276 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 RAB29O14966 203 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 KBTBD11O94819 623 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 LOXP28300 417 aaPredicted RBP4.47□□□□□ -1.69
VPS41-203ENST00000395969 COMPP49747 757 aaPredicted RBP4.47□□□□□ -1.69
VPS41-203ENST00000395969 HINT1P49773 126 aaPredicted RBP4.47□□□□□ -1.69
VPS41-203ENST00000395969 FOXG1P55316 489 aaPredicted RBP4.47□□□□□ -1.69
VPS41-203ENST00000395969 LCN2P80188 198 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 VAMP3Q15836 100 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 TMEM183BQ1AE95 376 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 BSXQ3C1V8 233 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 ZNF787Q6DD87 383 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 ZNF474Q6S9Z5 364 aaPredicted RBP4.47□□□□□ -1.69
VPS41-203ENST00000395969 VASH2Q86V25 355 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 TMEM256Q8N2U0 113 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 ZNF709Q8N972 641 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.47□□□□□ -1.69
VPS41-203ENST00000395969 VN1R17PQ8TDU5 208 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 TOMM40LQ969M1 308 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 OR5B12Q96R08 314 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 ZNF701Q9NV72 531 aaPredicted RBP4.47□□□□□ -1.69
VPS41-203ENST00000395969 CABIN1Q9Y6J0 2220 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 SHANK1Q9Y566 2161 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms