RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 TNFRSF19Q9NS68 423 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 CXXC4Q9H2H0 198 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 FGF21Q9NSA1 209 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 CCL25O15444 150 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 P2RY2P41231 377 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 CRYBA4P53673 196 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 TMEM170BQ5T4T1 132 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 CXCL12P48061 93 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 C18orf12Q96KH6 178 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 HILPDAQ9Y5L2 63 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 ID4P47928 161 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 MRPS21P82921 87 aaKnown RBP5.67□□□□□ -1.5
UBR4-204ENST00000375254 ZNF146Q15072 292 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 PGPEP1Q9NXJ5 209 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 GGTLC3B5MD39 225 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 SRSF3P84103 164 aaKnown RBP5.67□□□□□ -1.5
UBR4-204ENST00000375254 SPATA31B1PQ5VZV4 182 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 PDFQ9HBH1 243 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 PLAC1Q9HBJ0 212 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 KIAA0556O60303 1618 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 PEX7O00628 323 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 PVRP15151 417 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 EFNB2P52799 333 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 TRBV20OR9-2A0A075B6H5 130 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 TMEM78Q5T7P6 136 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 LYG1Q8N1E2 194 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 IGHV1-24A0A0C4DH33 117 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 ID3Q02535 119 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 KLRD1Q13241 179 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 ADCY10Q96PN6 1610 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 SS18L1O75177 396 aaPredicted RBP5.67□□□□□ -1.5
UBR4-204ENST00000375254 HLA-DMBP28068 263 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 RUNX3Q13761 415 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 BVES-AS1Q5T3Y7 98 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 RPL8P62917 257 aaKnown RBP5.67□□□□□ -1.5
UBR4-204ENST00000375254 FOXB1Q99853 325 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 HES7Q9BYE0 225 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 MYO3AQ8NEV4 1616 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 EREGO14944 169 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 ALPK2Q86TB3 2170 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 CACNA1IQ9P0X4 2223 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 TIMP3P35625 211 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 NEGR1Q7Z3B1 354 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 MUC21A0A0G2JKD1 596 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 MUC21A0A140T8X8 626 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 NPIPB13A6NJU9 1138 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 NPIPB4C9JG80 1138 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 ANOS1P23352 680 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 ETDBQ3ZM63 59 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 MUC21Q5SSG8 566 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 RNF208Q9H0X6 261 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 GP6Q9HCN6 339 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 TBC1D29Q9UFV1 150 aa5.67□□□□□ -1.5
UBR4-204ENST00000375254 TMEM14DPA8MWL7 114 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 TIAF1O95411 115 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 NBEAP1P0C6P0 100 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 UCP1P25874 307 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 MAGEA5P43359 124 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 PDLIM4P50479 330 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 FAM27BQ5VT28 67 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 AMN1Q8IY45 258 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 DLX6P56179 175 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 CCL7P80098 99 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 HCFC2Q9Y5Z7 792 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 A0A087X0K7 114 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 NDUFA3O95167 84 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 C18orf32Q8TCD1 76 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 ASCL2Q99929 193 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 PRSS27Q9BQR3 290 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 NPCDR1Q9BY65 106 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 CA6P23280 308 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 NANOS3P60323 173 aaKnown RBP5.66□□□□□ -1.5
UBR4-204ENST00000375254 LYZP61626 148 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 CYTL1Q9NRR1 136 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 TNFSF14O43557 240 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 SNAI2O43623 268 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 CXCL1P09341 107 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 CTLA4P16410 223 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 hCG_38984A0A1B0GV85 526 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 PROB1E7EW31 1015 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 YPEL3P61236 119 aaPredicted RBP5.66□□□□□ -1.5
UBR4-204ENST00000375254 ZNF683Q8IZ20 524 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 FOXC2Q99958 501 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 SETBP1Q9Y6X0 1596 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 IGHV4-39P01824 125 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 LAGE3Q14657 143 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 PLCE1Q9P212 2302 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 A0A1B0GTL3 188 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 SOCS3O14543 225 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 EDIL3O43854 480 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 BHLHA9Q7RTU4 235 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 FOXI2Q6ZQN5 318 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 ADM5C9JUS6 153 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 PAX1P15863 534 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 CDAP32320 146 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.66□□□□□ -1.5
UBR4-204ENST00000375254 LIPT2A6NK58 231 aa5.65□□□□□ -1.5
UBR4-204ENST00000375254 IL6RP08887 468 aaPredicted RBP5.65□□□□□ -1.5
UBR4-204ENST00000375254 EPDR1Q9UM22 224 aa5.65□□□□□ -1.5
UBR4-204ENST00000375254 FAM157BP0CG42 384 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms