RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 SAA2P0DJI9 122 aaPredicted RBP15.31■□□□□ 0.04
HOXA9-201ENST00000343483 LYPD2Q6UXB3 125 aa15.31■□□□□ 0.04
HOXA9-201ENST00000343483 LYG1Q8N1E2 194 aa15.31■□□□□ 0.04
HOXA9-201ENST00000343483 H1FXQ92522 213 aaKnown RBP15.31■□□□□ 0.04
HOXA9-201ENST00000343483 RSG1Q9BU20 258 aa15.31■□□□□ 0.04
HOXA9-201ENST00000343483 C20orf24Q9BUV8 137 aa15.31■□□□□ 0.04
HOXA9-201ENST00000343483 PRELID3BQ9Y3B1 194 aa15.31■□□□□ 0.04
HOXA9-201ENST00000343483 FLNCQ14315 2725 aa15.31■□□□□ 0.04
HOXA9-201ENST00000343483 USF3Q68DE3 2245 aa15.31■□□□□ 0.04
HOXA9-201ENST00000343483 RAB29O14966 203 aa15.31■□□□□ 0.04
HOXA9-201ENST00000343483 RAB2AP61019 212 aa15.31■□□□□ 0.04
HOXA9-201ENST00000343483 HAGHQ16775 308 aa15.31■□□□□ 0.04
HOXA9-201ENST00000343483 C1orf229Q6ZS94 237 aaPredicted RBP15.31■□□□□ 0.04
HOXA9-201ENST00000343483 CLCC1Q96S66 551 aa15.31■□□□□ 0.04
HOXA9-201ENST00000343483 S1PR3Q99500 378 aa15.31■□□□□ 0.04
HOXA9-201ENST00000343483 LINC00574Q9H8X3 128 aa15.31■□□□□ 0.04
HOXA9-201ENST00000343483 C7orf77A4D0Y5 90 aa15.3■□□□□ 0.04
HOXA9-201ENST00000343483 NDUFB3O43676 98 aa15.3■□□□□ 0.04
HOXA9-201ENST00000343483 FCN3O75636 299 aa15.3■□□□□ 0.04
HOXA9-201ENST00000343483 TSPAN9O75954 239 aa15.3■□□□□ 0.04
HOXA9-201ENST00000343483 HPRT1P00492 218 aa15.3■□□□□ 0.04
HOXA9-201ENST00000343483 HBE1P02100 147 aa15.3■□□□□ 0.04
HOXA9-201ENST00000343483 ERVFRD-1P60508 538 aa15.3■□□□□ 0.04
HOXA9-201ENST00000343483 ZNF672Q499Z4 452 aaPredicted RBP15.3■□□□□ 0.04
HOXA9-201ENST00000343483 SP5Q6BEB4 398 aaPredicted RBP15.3■□□□□ 0.04
HOXA9-201ENST00000343483 SSX9Q7RTT3 188 aa15.3■□□□□ 0.04
HOXA9-201ENST00000343483 GAL3ST2Q9H3Q3 398 aa15.3■□□□□ 0.04
HOXA9-201ENST00000343483 RPUSD1Q9UJJ7 312 aaKnown RBP15.3■□□□□ 0.04
HOXA9-201ENST00000343483 ANKHD1Q8IWZ3 2542 aaKnown RBP15.3■□□□□ 0.04
HOXA9-201ENST00000343483 COLCA2A8K830 154 aa15.29■□□□□ 0.04
HOXA9-201ENST00000343483 PLA2G2AP14555 144 aa15.29■□□□□ 0.04
HOXA9-201ENST00000343483 MEF2CQ06413 473 aaPredicted RBP15.29■□□□□ 0.04
HOXA9-201ENST00000343483 LRRC10Q5BKY1 277 aa15.29■□□□□ 0.04
HOXA9-201ENST00000343483 SOHLH1Q5JUK2 328 aa15.29■□□□□ 0.04
HOXA9-201ENST00000343483 AVPI1Q5T686 147 aa15.29■□□□□ 0.04
HOXA9-201ENST00000343483 ZNF439Q8NDP4 499 aa15.29■□□□□ 0.04
HOXA9-201ENST00000343483 MYO18BQ8IUG5 2567 aa15.29■□□□□ 0.04
HOXA9-201ENST00000343483 CRYBA1P05813 215 aa15.29■□□□□ 0.04
HOXA9-201ENST00000343483 CCL3L1P16619 93 aa15.29■□□□□ 0.04
HOXA9-201ENST00000343483 UQCRFS1P47985 274 aa15.29■□□□□ 0.04
HOXA9-201ENST00000343483 MRPS11P82912 194 aaKnown RBP15.29■□□□□ 0.04
HOXA9-201ENST00000343483 LRRC75BQ2VPJ9 315 aa15.29■□□□□ 0.04
HOXA9-201ENST00000343483 C15orf54Q8N8G6 183 aa15.29■□□□□ 0.04
HOXA9-201ENST00000343483 RBMXL1Q96E39 390 aaKnown RBP15.29■□□□□ 0.04
HOXA9-201ENST00000343483 SLC38A11Q08AI6 406 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 TMEM30BQ3MIR4 351 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 OR8G2PQ6IF36 304 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 TMEM14EPQ6UXP3 125 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 VKORC1L1Q8N0U8 176 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.28■□□□□ 0.04
HOXA9-201ENST00000343483 ZNF714Q96N38 554 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 PSMG3Q9BT73 122 aaPredicted RBP15.28■□□□□ 0.04
HOXA9-201ENST00000343483 HIPK2Q9H2X6 1198 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 CTSZQ9UBR2 303 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 GAB2Q9UQC2 676 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 DIDO1Q9BTC0 2240 aaKnown RBP15.28■□□□□ 0.04
HOXA9-201ENST00000343483 DVL1O14640 695 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 TNFRSF13BO14836 293 aaPredicted RBP15.28■□□□□ 0.04
HOXA9-201ENST00000343483 PPIHO43447 177 aaKnown RBP15.28■□□□□ 0.04
HOXA9-201ENST00000343483 OR8U8P0C7N1 319 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 OR2B8PP59922 312 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 ERVK-16P61578 105 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 SPINK9Q5DT21 86 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 TMEM200BQ69YZ2 307 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 ZDHHC16Q969W1 377 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 OR4C12Q96R67 309 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 SAV1Q9H4B6 383 aaPredicted RBP15.28■□□□□ 0.04
HOXA9-201ENST00000343483 ZNRD1Q9P1U0 126 aa15.28■□□□□ 0.04
HOXA9-201ENST00000343483 LYNX1G3V0Z9 82 aa15.27■□□□□ 0.03
HOXA9-201ENST00000343483 RBFOX2O43251 390 aaKnown RBP eCLIP15.27■□□□□ 0.03
HOXA9-201ENST00000343483 LYNX1P0DP58 116 aa15.27■□□□□ 0.03
HOXA9-201ENST00000343483 PAX6P26367 422 aa15.27■□□□□ 0.03
HOXA9-201ENST00000343483 KIR2DS2P43631 304 aa15.27■□□□□ 0.03
HOXA9-201ENST00000343483 ICAM4Q14773 271 aa15.27■□□□□ 0.03
HOXA9-201ENST00000343483 ZNF506Q5JVG8 444 aa15.27■□□□□ 0.03
HOXA9-201ENST00000343483 CLDND2Q8NHS1 167 aa15.27■□□□□ 0.03
HOXA9-201ENST00000343483 DTD1Q8TEA8 209 aa15.27■□□□□ 0.03
HOXA9-201ENST00000343483 DDB2Q92466 427 aa15.27■□□□□ 0.03
HOXA9-201ENST00000343483 ZNF251Q9BRH9 671 aa15.27■□□□□ 0.03
HOXA9-201ENST00000343483 WDR61Q9GZS3 305 aaKnown RBP15.27■□□□□ 0.03
HOXA9-201ENST00000343483 RPRMQ9NS64 109 aa15.27■□□□□ 0.03
HOXA9-201ENST00000343483 PUS1Q9Y606 427 aaKnown RBP eCLIP15.27■□□□□ 0.03
HOXA9-201ENST00000343483 UBE2L5PA0A1B0GUS4 154 aa15.26■□□□□ 0.03
HOXA9-201ENST00000343483 CEBPZOSA8MTT3 80 aa15.26■□□□□ 0.03
HOXA9-201ENST00000343483 ZG16O60844 167 aa15.26■□□□□ 0.03
HOXA9-201ENST00000343483 SCAF4O95104 1147 aaKnown RBP15.26■□□□□ 0.03
HOXA9-201ENST00000343483 SRP19P09132 144 aaKnown RBP15.26■□□□□ 0.03
HOXA9-201ENST00000343483 OR9G9P0C7N8 305 aa15.26■□□□□ 0.03
HOXA9-201ENST00000343483 DAOP14920 347 aa15.26■□□□□ 0.03
HOXA9-201ENST00000343483 TFF3Q07654 80 aa15.26■□□□□ 0.03
HOXA9-201ENST00000343483 RHEBQ15382 184 aa15.26■□□□□ 0.03
HOXA9-201ENST00000343483 SLC25A48Q6ZT89 311 aaKnown RBP15.26■□□□□ 0.03
HOXA9-201ENST00000343483 OR4S2Q8NH73 311 aa15.26■□□□□ 0.03
HOXA9-201ENST00000343483 QTRT1Q9BXR0 403 aaKnown RBP15.26■□□□□ 0.03
HOXA9-201ENST00000343483 PARD6GQ9BYG4 376 aaPredicted RBP15.26■□□□□ 0.03
HOXA9-201ENST00000343483 VSIRQ9H7M9 311 aa15.26■□□□□ 0.03
HOXA9-201ENST00000343483 UNKLQ9H9P5 680 aaKnown RBP15.26■□□□□ 0.03
HOXA9-201ENST00000343483 DSCAML1Q8TD84 2053 aa15.26■□□□□ 0.03
HOXA9-201ENST00000343483 TANC2Q9HCD6 1990 aa15.26■□□□□ 0.03
HOXA9-201ENST00000343483 UBR5O95071 2799 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms