RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 OR51J1Q9H342 316 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 KCNK15Q9H427 330 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 ZNF107Q9UII5 783 aaPredicted RBP4.95□□□□□ -1.62
SMG1-201ENST00000330588 ZNF221Q9UK13 617 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 KCNK7Q9Y2U2 307 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 WASHC3Q9Y3C0 194 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 TRBV6-7A0A0A0MS04 114 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 A0A1W2PN81 502 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 MFSD2BA6NFX1 497 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 ZNF736B4DX44 427 aaPredicted RBP4.95□□□□□ -1.62
SMG1-201ENST00000330588 RRHO14718 337 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 FABP7O15540 132 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 HSPA12AO43301 675 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 SLC22A5O76082 557 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 BRI3O95415 125 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 DHFRP00374 187 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 CTXN2P0C2S0 81 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 CT45A6P0DMU7 189 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 CT45A5P0DMU8 189 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 CT45A7P0DMV0 189 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 RRASP10301 218 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 CHRNA7P36544 502 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 CEACAM6P40199 344 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 F2RL1P55085 397 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 FHL3Q13643 280 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 MSMO1Q15800 293 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 TIMM50Q3ZCQ8 353 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 FAM53AQ6NSI3 398 aaPredicted RBP4.95□□□□□ -1.62
SMG1-201ENST00000330588 C10orf99Q6UWK7 81 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 GPR141Q7Z602 305 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 CCDC28AQ8IWP9 274 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 IL1F10Q8WWZ1 152 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 DPF1Q92782 380 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 ADTRPQ96IZ2 230 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 NOL4LQ96MY1 436 aaPredicted RBP4.95□□□□□ -1.62
SMG1-201ENST00000330588 TSNAXQ99598 290 aaKnown RBP4.95□□□□□ -1.62
SMG1-201ENST00000330588 HSPB9Q9BQS6 159 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 C11orf54Q9H0W9 315 aaPredicted RBP4.95□□□□□ -1.62
SMG1-201ENST00000330588 TXNL4BQ9NX01 149 aaKnown RBP4.95□□□□□ -1.62
SMG1-201ENST00000330588 RNF150Q9ULK6 438 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 SSR3Q9UNL2 185 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 ETV7Q9Y603 341 aa4.95□□□□□ -1.62
SMG1-201ENST00000330588 IGHV7-81A0A0B4J1V7 117 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 ZNF98A6NK75 572 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 SH2D7A6NKC9 451 aaPredicted RBP4.94□□□□□ -1.62
SMG1-201ENST00000330588 H3BUA1 57 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 RAMP3O60896 148 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 APOA2P02652 100 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 TFAP2AP05549 437 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 SCTP09683 121 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 PSMB9P28065 219 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 CDKN1BP46527 198 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 OR3A3P47888 321 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 LGALS7P47929 136 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 INSL3P51460 131 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 GNG2P59768 71 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 TMEM267Q0VDI3 215 aaPredicted RBP4.94□□□□□ -1.62
SMG1-201ENST00000330588 AKIRIN2Q53H80 203 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 KHDC1LQ5JSQ8 128 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 HES5Q5TA89 166 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 C22orf42Q6IC83 251 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 FAM131AQ6UXB0 335 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 ZNF562Q6V9R5 426 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 ZNF329Q86UD4 541 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 NR2C2APQ86WQ0 139 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 KLHL30-AS1Q8NEE0 82 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 OR5T1Q8NG75 326 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 OR5M8Q8NGP6 311 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 OR10J5Q8NHC4 309 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 SETD6Q8TBK2 473 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 ZNF503Q96F45 646 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 KCTD7Q96MP8 289 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 HDHD3Q9BSH5 251 aaPredicted RBP4.94□□□□□ -1.62
SMG1-201ENST00000330588 RDH8Q9NYR8 311 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 NUBP2Q9Y5Y2 271 aa4.94□□□□□ -1.62
SMG1-201ENST00000330588 MGAM2Q2M2H8 2515 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 TRAV41A0A0B4J266 112 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 IGKV1-6A0A0C4DH72 117 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 PCP4L1A6NKN8 68 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 LINC01548A6NM66 108 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 I3L521 148 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 CCL24O00175 119 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 ATP6V0E1O15342 81 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 PROP1O75360 226 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 TUSC2O75896 110 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 OR8U8P0C7N1 319 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 IGLL1P15814 213 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 CLDN12P56749 244 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 OR10A3P58181 314 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 KIAA0141Q14154 515 aaPredicted RBP4.93□□□□□ -1.62
SMG1-201ENST00000330588 HACD4Q5VWC8 232 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 SFXN4Q6P4A7 337 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 H1FOOQ8IZA3 346 aaPredicted RBP4.93□□□□□ -1.62
SMG1-201ENST00000330588 ZNF491Q8N8L2 437 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 SLA2Q9H6Q3 261 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 TMEM140Q9NV12 185 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 AURKAIP1Q9NWT8 199 aaPredicted RBP4.93□□□□□ -1.62
SMG1-201ENST00000330588 OR1A1Q9P1Q5 309 aa4.93□□□□□ -1.62
SMG1-201ENST00000330588 FOXA2Q9Y261 457 aaPredicted RBP4.93□□□□□ -1.62
SMG1-201ENST00000330588 VSIG4Q9Y279 399 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms