RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 ZNF823P16415 610 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 GPR183P32249 361 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 PTGDSP41222 190 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 WASP42768 502 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 HHEXQ03014 270 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 ZNF90Q03938 601 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 ABHD17BQ5VST6 288 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 NEU4Q8WWR8 484 aaPredicted RBP5.6□□□□□ -1.51
ZNF540-201ENST00000316433 LHX4Q969G2 390 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 OXGR1Q96P68 337 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 GP6Q9HCN6 339 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 CLCF1Q9UBD9 225 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.6□□□□□ -1.51
ZNF540-201ENST00000316433 MDFIC2A0A1B0GVS7 189 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 A6NDN8 102 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 M0QXV9 152 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 HRKO00198 91 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 SMAD7O15105 426 aaKnown RBP5.6□□□□□ -1.51
ZNF540-201ENST00000316433 SPTBP11277 2137 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 CRYBB3P26998 211 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 IER3P46695 156 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 UBE2G1P62253 170 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 C5orf47Q569G3 176 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 TMEM211Q6ICI0 200 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 SCCPDHQ8NBX0 429 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 OR8B3Q8NGG8 313 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 PIGTQ969N2 578 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 NEIL1Q96FI4 390 aaPredicted RBP5.6□□□□□ -1.51
ZNF540-201ENST00000316433 OR8B2Q96RD0 313 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 ANAPC13Q9BS18 74 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 SFXN3Q9BWM7 321 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 OR10A2Q9H208 303 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 A0A1W2PPM0 123 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 SLC16A7O60669 478 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 SS18L1O75177 396 aaPredicted RBP5.59□□□□□ -1.51
ZNF540-201ENST00000316433 DHRS3O75911 302 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 CRYGSP22914 178 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 F2RP25116 425 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 HTR1DP28221 377 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 CFHR2P36980 270 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 TMPRSS3P57727 454 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 ALKBH6Q3KRA9 238 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 DCAF12Q5T6F0 453 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 ADAMTSL5Q6ZMM2 481 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 ADAT3Q96EY9 351 aaPredicted RBP5.59□□□□□ -1.51
ZNF540-201ENST00000316433 NAA38Q9BRA0 125 aaKnown RBP5.59□□□□□ -1.51
ZNF540-201ENST00000316433 TMEM59Q9BXS4 323 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 STRADBQ9C0K7 418 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 NECAP2Q9NVZ3 263 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 DNAH12Q6ZR08 3092 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 FAM181BA6NEQ2 426 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 SLC22A20A6NK97 555 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 ISLRO14498 428 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 TMPRSS2O15393 492 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 IGHG1P01857 330 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 PSG2P11465 335 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 ABCA11PQ4W5N1 156 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 PLCXD3Q63HM9 321 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 EBLN2Q6P2I7 272 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 C8orf86Q6ZUL3 223 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 SUMF1Q8NBK3 374 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 C18orf32Q8TCD1 76 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 DOK4Q8TEW6 326 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 CYYR1Q96J86 154 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 CITED2Q99967 270 aaPredicted RBP5.59□□□□□ -1.51
ZNF540-201ENST00000316433 TMEM204Q9BSN7 226 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 SLC39A9Q9NUM3 307 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 RALYQ9UKM9 306 aaKnown RBP5.59□□□□□ -1.51
ZNF540-201ENST00000316433 UBE2J1Q9Y385 318 aaPredicted RBP5.59□□□□□ -1.51
ZNF540-201ENST00000316433 ARL2-SNX15V9GYD0 113 aa5.59□□□□□ -1.51
ZNF540-201ENST00000316433 TRAV25A0A0B4J276 109 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 OR4C46A6NHA9 309 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 VWC2LB2RUY7 222 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 LMO7DNF2Z398 122 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 CA1P00915 261 aaPredicted RBP5.59□□□□□ -1.52
ZNF540-201ENST00000316433 SPINK8P0C7L1 97 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 HIST1H1EP10412 219 aaKnown RBP5.59□□□□□ -1.52
ZNF540-201ENST00000316433 GABRG2P18507 467 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 TMEM97Q5BJF2 176 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 RHBDD2Q6NTF9 364 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 SLC23A3Q6PIS1 610 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 TRAT1Q6PIZ9 186 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 OR10G6Q8NH81 332 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 SCGB1C1Q8TD33 95 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 ZNF501Q96CX3 271 aaPredicted RBP5.59□□□□□ -1.52
ZNF540-201ENST00000316433 GRAMD2BQ96HH9 432 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 ARHGAP5-AS1Q96IT6 56 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 GNB1LQ9BYB4 327 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 SCRT2Q9NQ03 307 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 SPANXB1Q9NS25 103 aaPredicted RBP5.59□□□□□ -1.52
ZNF540-201ENST00000316433 VPREB3Q9UKI3 123 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 CYSLTR1Q9Y271 337 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 COA3Q9Y2R0 106 aaPredicted RBP5.59□□□□□ -1.52
ZNF540-201ENST00000316433 EMC9Q9Y3B6 208 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 TIMM9Q9Y5J7 89 aa5.59□□□□□ -1.52
ZNF540-201ENST00000316433 HELTA6NFD8 242 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 LMX1BO60663 402 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 MPIG6BO95866 241 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 OTX2P32243 289 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 UQCRFS1P47985 274 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms