RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 MZT2BQ6NZ67 158 aa14.21□□□□□ -0.13
SSSCA1-201ENST00000309328 SLC35E3Q7Z769 313 aa14.21□□□□□ -0.13
SSSCA1-201ENST00000309328 PPP1R27Q86WC6 154 aa14.21□□□□□ -0.13
SSSCA1-201ENST00000309328 OR4A5Q8NH83 315 aa14.21□□□□□ -0.13
SSSCA1-201ENST00000309328 MRGPRFQ96AM1 343 aa14.21□□□□□ -0.13
SSSCA1-201ENST00000309328 RHOVQ96L33 236 aa14.21□□□□□ -0.13
SSSCA1-201ENST00000309328 C5orf66Q9H5L9 145 aa14.21□□□□□ -0.13
SSSCA1-201ENST00000309328 KCNIP3Q9Y2W7 256 aa14.21□□□□□ -0.13
SSSCA1-201ENST00000309328 RNF114Q9Y508 228 aa14.21□□□□□ -0.13
SSSCA1-201ENST00000309328 AP4M1O00189 453 aa14.2□□□□□ -0.14
SSSCA1-201ENST00000309328 LYRM1O43325 122 aa14.2□□□□□ -0.14
SSSCA1-201ENST00000309328 SLC25A17O43808 307 aa14.2□□□□□ -0.14
SSSCA1-201ENST00000309328 IGLV2-23P01705 113 aa14.2□□□□□ -0.14
SSSCA1-201ENST00000309328 UBE2MP61081 183 aaKnown RBP14.2□□□□□ -0.14
SSSCA1-201ENST00000309328 AWAT1Q58HT5 328 aa14.2□□□□□ -0.14
SSSCA1-201ENST00000309328 OR2B11Q5JQS5 317 aa14.2□□□□□ -0.14
SSSCA1-201ENST00000309328 C9orf152Q5JTZ5 239 aa14.2□□□□□ -0.14
SSSCA1-201ENST00000309328 SGPP2Q8IWX5 399 aa14.2□□□□□ -0.14
SSSCA1-201ENST00000309328 RITA1Q96K30 269 aa14.2□□□□□ -0.14
SSSCA1-201ENST00000309328 RTBDNQ9BSG5 229 aaPredicted RBP14.2□□□□□ -0.14
SSSCA1-201ENST00000309328 FBXL15Q9H469 300 aa14.2□□□□□ -0.14
SSSCA1-201ENST00000309328 SIGLEC9Q9Y336 463 aa14.2□□□□□ -0.14
SSSCA1-201ENST00000309328 TEX13DA0A0J9YY54 714 aaPredicted RBP14.19□□□□□ -0.14
SSSCA1-201ENST00000309328 C3orf85A0A1B0GTC6 90 aa14.19□□□□□ -0.14
SSSCA1-201ENST00000309328 RAMP3O60896 148 aa14.19□□□□□ -0.14
SSSCA1-201ENST00000309328 OR2A4O95047 310 aa14.19□□□□□ -0.14
SSSCA1-201ENST00000309328 ANXA3P12429 323 aa14.19□□□□□ -0.14
SSSCA1-201ENST00000309328 PI3P19957 117 aa14.19□□□□□ -0.14
SSSCA1-201ENST00000309328 CNTFRP26992 372 aa14.19□□□□□ -0.14
SSSCA1-201ENST00000309328 BRWD1-AS2P59051 145 aa14.19□□□□□ -0.14
SSSCA1-201ENST00000309328 DEFA1P59665 94 aa14.19□□□□□ -0.14
SSSCA1-201ENST00000309328 DEFA3P59666 94 aa14.19□□□□□ -0.14
SSSCA1-201ENST00000309328 DHODHQ02127 395 aa14.19□□□□□ -0.14
SSSCA1-201ENST00000309328 ZNF562Q6V9R5 426 aa14.19□□□□□ -0.14
SSSCA1-201ENST00000309328 MMD2Q8IY49 270 aa14.19□□□□□ -0.14
SSSCA1-201ENST00000309328 CHPT1Q8WUD6 406 aa14.19□□□□□ -0.14
SSSCA1-201ENST00000309328 OR2A7Q96R45 310 aa14.19□□□□□ -0.14
SSSCA1-201ENST00000309328 NAA60Q9H7X0 242 aa14.19□□□□□ -0.14
SSSCA1-201ENST00000309328 BET1LQ9NYM9 111 aa14.19□□□□□ -0.14
SSSCA1-201ENST00000309328 COL6A5A8TX70 2615 aa14.18□□□□□ -0.14
SSSCA1-201ENST00000309328 CRYM-AS1A6NIL9 109 aa14.18□□□□□ -0.14
SSSCA1-201ENST00000309328 ACTL6BO94805 426 aa14.18□□□□□ -0.14
SSSCA1-201ENST00000309328 NDUFB6O95139 128 aa14.18□□□□□ -0.14
SSSCA1-201ENST00000309328 IGF1P05019 195 aa14.18□□□□□ -0.14
SSSCA1-201ENST00000309328 CRYGBP07316 175 aa14.18□□□□□ -0.14
SSSCA1-201ENST00000309328 MDKP21741 143 aaPredicted RBP14.18□□□□□ -0.14
SSSCA1-201ENST00000309328 MAS1LP35410 378 aa14.18□□□□□ -0.14
SSSCA1-201ENST00000309328 SRPXP78539 464 aa14.18□□□□□ -0.14
SSSCA1-201ENST00000309328 ASAH1Q13510 395 aa14.18□□□□□ -0.14
SSSCA1-201ENST00000309328 TMEM128Q5BJH2 165 aa14.18□□□□□ -0.14
SSSCA1-201ENST00000309328 C12orf54Q6X4T0 127 aa14.18□□□□□ -0.14
SSSCA1-201ENST00000309328 GALNT14Q96FL9 552 aa14.18□□□□□ -0.14
SSSCA1-201ENST00000309328 GPHA2Q96T91 129 aa14.18□□□□□ -0.14
SSSCA1-201ENST00000309328 TSC22D3Q99576 134 aa14.18□□□□□ -0.14
SSSCA1-201ENST00000309328 VSIG4Q9Y279 399 aa14.18□□□□□ -0.14
SSSCA1-201ENST00000309328 LINC00854A0A1B0GVQ3 168 aa14.17□□□□□ -0.14
SSSCA1-201ENST00000309328 MARCH11A6NNE9 402 aa14.17□□□□□ -0.14
SSSCA1-201ENST00000309328 SRRM4A7MD48 611 aaKnown RBP14.17□□□□□ -0.14
SSSCA1-201ENST00000309328 KBTBD11O94819 623 aa14.17□□□□□ -0.14
SSSCA1-201ENST00000309328 SAA1P0DJI8 122 aaPredicted RBP14.17□□□□□ -0.14
SSSCA1-201ENST00000309328 VSIG10L2P0DP72 767 aa14.17□□□□□ -0.14
SSSCA1-201ENST00000309328 LPAR6P43657 344 aa14.17□□□□□ -0.14
SSSCA1-201ENST00000309328 SLC35B1P78383 322 aa14.17□□□□□ -0.14
SSSCA1-201ENST00000309328 TMEM267Q0VDI3 215 aaPredicted RBP14.17□□□□□ -0.14
SSSCA1-201ENST00000309328 PUSL1Q8N0Z8 303 aaKnown RBP14.17□□□□□ -0.14
SSSCA1-201ENST00000309328 CENPSQ8N2Z9 138 aa14.17□□□□□ -0.14
SSSCA1-201ENST00000309328 COMMD1Q8N668 190 aa14.17□□□□□ -0.14
SSSCA1-201ENST00000309328 DMBX1Q8NFW5 382 aa14.17□□□□□ -0.14
SSSCA1-201ENST00000309328 R3HDM4Q96D70 268 aa14.17□□□□□ -0.14
SSSCA1-201ENST00000309328 TMEM68Q96MH6 324 aa14.17□□□□□ -0.14
SSSCA1-201ENST00000309328 OR51J1Q9H342 316 aa14.17□□□□□ -0.14
SSSCA1-201ENST00000309328 SERTAD4Q9NUC0 356 aa14.17□□□□□ -0.14
SSSCA1-201ENST00000309328 PLA2G10O15496 165 aa14.16□□□□□ -0.14
SSSCA1-201ENST00000309328 S1PR2O95136 353 aa14.16□□□□□ -0.14
SSSCA1-201ENST00000309328 UCP1P25874 307 aa14.16□□□□□ -0.14
SSSCA1-201ENST00000309328 SLC6A1P30531 599 aa14.16□□□□□ -0.14
SSSCA1-201ENST00000309328 PROK1P58294 105 aa14.16□□□□□ -0.14
SSSCA1-201ENST00000309328 PRSS8Q16651 343 aa14.16□□□□□ -0.14
SSSCA1-201ENST00000309328 ZNF585BQ52M93 769 aa14.16□□□□□ -0.14
SSSCA1-201ENST00000309328 TMEM167AQ8TBQ9 72 aa14.16□□□□□ -0.14
SSSCA1-201ENST00000309328 WNT10AQ9GZT5 417 aa14.16□□□□□ -0.14
SSSCA1-201ENST00000309328 TMEM222Q9H0R3 208 aa14.16□□□□□ -0.14
SSSCA1-201ENST00000309328 IGHV7-81A0A0B4J1V7 117 aa14.15□□□□□ -0.14
SSSCA1-201ENST00000309328 FAM240BA0A1B0GVZ2 78 aa14.15□□□□□ -0.14
SSSCA1-201ENST00000309328 CA2P00918 260 aa14.15□□□□□ -0.14
SSSCA1-201ENST00000309328 CCR6P51684 374 aa14.15□□□□□ -0.14
SSSCA1-201ENST00000309328 CRIP2P52943 208 aaPredicted RBP14.15□□□□□ -0.14
SSSCA1-201ENST00000309328 CX3CL1P78423 397 aa14.15□□□□□ -0.14
SSSCA1-201ENST00000309328 TRIM16LQ309B1 348 aa14.15□□□□□ -0.14
SSSCA1-201ENST00000309328 OR4A47Q6IF82 309 aa14.15□□□□□ -0.14
SSSCA1-201ENST00000309328 TMED4Q7Z7H5 227 aa14.15□□□□□ -0.14
SSSCA1-201ENST00000309328 SPATA3Q8NHX4 192 aa14.15□□□□□ -0.14
SSSCA1-201ENST00000309328 ARPC1AQ92747 370 aa14.15□□□□□ -0.14
SSSCA1-201ENST00000309328 IL22RA2Q969J5 263 aa14.15□□□□□ -0.14
SSSCA1-201ENST00000309328 PALMDQ9NP74 551 aa14.15□□□□□ -0.14
SSSCA1-201ENST00000309328 CNIH1O95406 144 aa14.14□□□□□ -0.15
SSSCA1-201ENST00000309328 OR5AC1P0C628 307 aa14.14□□□□□ -0.15
SSSCA1-201ENST00000309328 AKR1C4P17516 323 aa14.14□□□□□ -0.15
SSSCA1-201ENST00000309328 VDAC1P21796 283 aa14.14□□□□□ -0.15
SSSCA1-201ENST00000309328 BTCP35070 178 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms