RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 UQCR10Q9UDW1 63 aa13.66□□□□□ -0.22
CCDC8-201ENST00000307522 KCNS2Q9ULS6 477 aa13.66□□□□□ -0.22
CCDC8-201ENST00000307522 MDFIC2A0A1B0GVS7 189 aa13.66□□□□□ -0.22
CCDC8-201ENST00000307522 CLEC18AA5D8T8 446 aa13.66□□□□□ -0.22
CCDC8-201ENST00000307522 RANP62826 216 aaKnown RBP13.66□□□□□ -0.22
CCDC8-201ENST00000307522 SRPXP78539 464 aa13.66□□□□□ -0.22
CCDC8-201ENST00000307522 SLC25A47Q6Q0C1 308 aa13.66□□□□□ -0.22
CCDC8-201ENST00000307522 CLEC18CQ8NCF0 446 aa13.66□□□□□ -0.22
CCDC8-201ENST00000307522 OR1L1Q8NH94 360 aa13.66□□□□□ -0.22
CCDC8-201ENST00000307522 RDH5Q92781 318 aa13.66□□□□□ -0.22
CCDC8-201ENST00000307522 ZNF488Q96MN9 340 aa13.66□□□□□ -0.22
CCDC8-201ENST00000307522 F6UZH7 168 aa13.65□□□□□ -0.22
CCDC8-201ENST00000307522 CBR3O75828 277 aa13.65□□□□□ -0.22
CCDC8-201ENST00000307522 CCL11P51671 97 aa13.65□□□□□ -0.22
CCDC8-201ENST00000307522 GRB2P62993 217 aaKnown RBP13.65□□□□□ -0.22
CCDC8-201ENST00000307522 TRIP6Q15654 476 aaKnown RBP13.65□□□□□ -0.22
CCDC8-201ENST00000307522 C1orf174Q8IYL3 243 aa13.65□□□□□ -0.22
CCDC8-201ENST00000307522 ZIC4Q8N9L1 334 aa13.65□□□□□ -0.22
CCDC8-201ENST00000307522 NUDT10Q8NFP7 164 aa13.65□□□□□ -0.22
CCDC8-201ENST00000307522 SFRP2Q96HF1 295 aa13.65□□□□□ -0.22
CCDC8-201ENST00000307522 WDR1O75083 606 aa13.65□□□□□ -0.22
CCDC8-201ENST00000307522 NRASP01111 189 aa13.65□□□□□ -0.22
CCDC8-201ENST00000307522 IGKV1-39P01597 117 aa13.65□□□□□ -0.22
CCDC8-201ENST00000307522 IGKV1D-39P04432 117 aa13.65□□□□□ -0.22
CCDC8-201ENST00000307522 UCP1P25874 307 aa13.65□□□□□ -0.22
CCDC8-201ENST00000307522 SUMO3P55854 103 aaPredicted RBP13.65□□□□□ -0.22
CCDC8-201ENST00000307522 UBE2NP61088 152 aaKnown RBP13.65□□□□□ -0.22
CCDC8-201ENST00000307522 OR1C1Q15619 314 aa13.65□□□□□ -0.22
CCDC8-201ENST00000307522 PEAR1Q5VY43 1037 aaPredicted RBP13.65□□□□□ -0.22
CCDC8-201ENST00000307522 C20orf204Q6ZNR8 217 aa13.65□□□□□ -0.22
CCDC8-201ENST00000307522 ORAOV1Q8WV07 137 aa13.65□□□□□ -0.22
CCDC8-201ENST00000307522 ZNF586Q9NXT0 402 aa13.65□□□□□ -0.22
CCDC8-201ENST00000307522 ZNF318Q5VUA4 2279 aa13.65□□□□□ -0.22
CCDC8-201ENST00000307522 CLDN14O95500 239 aa13.64□□□□□ -0.23
CCDC8-201ENST00000307522 GFRA1P56159 465 aa13.64□□□□□ -0.23
CCDC8-201ENST00000307522 PRRG4Q9BZD6 226 aa13.64□□□□□ -0.23
CCDC8-201ENST00000307522 SLC45A2Q9UMX9 530 aa13.64□□□□□ -0.23
CCDC8-201ENST00000307522 EDDM3BP56851 147 aa13.64□□□□□ -0.23
CCDC8-201ENST00000307522 CEACAM16Q2WEN9 425 aa13.64□□□□□ -0.23
CCDC8-201ENST00000307522 C1orf185Q5T7R7 199 aa13.64□□□□□ -0.23
CCDC8-201ENST00000307522 FAM53AQ6NSI3 398 aaPredicted RBP13.64□□□□□ -0.23
CCDC8-201ENST00000307522 TMEM144Q7Z5S9 345 aa13.64□□□□□ -0.23
CCDC8-201ENST00000307522 CENPVQ7Z7K6 275 aaPredicted RBP13.64□□□□□ -0.23
CCDC8-201ENST00000307522 ZNF611Q8N823 705 aa13.64□□□□□ -0.23
CCDC8-201ENST00000307522 OR1A1Q9P1Q5 309 aa13.64□□□□□ -0.23
CCDC8-201ENST00000307522 TSPOP30536 169 aa13.64□□□□□ -0.23
CCDC8-201ENST00000307522 HBG1P69891 147 aa13.64□□□□□ -0.23
CCDC8-201ENST00000307522 HBG2P69892 147 aa13.64□□□□□ -0.23
CCDC8-201ENST00000307522 Q56UQ5 140 aa13.64□□□□□ -0.23
CCDC8-201ENST00000307522 AAED1Q7RTV5 226 aa13.64□□□□□ -0.23
CCDC8-201ENST00000307522 ADPRHL1Q8NDY3 354 aa13.64□□□□□ -0.23
CCDC8-201ENST00000307522 PLSCR2Q9NRY7 297 aa13.64□□□□□ -0.23
CCDC8-201ENST00000307522 SCO2A0A1W2PP80 73 aa13.63□□□□□ -0.23
CCDC8-201ENST00000307522 OR2T8A6NH00 312 aa13.63□□□□□ -0.23
CCDC8-201ENST00000307522 TMEM250H0YL14 139 aa13.63□□□□□ -0.23
CCDC8-201ENST00000307522 F2RP25116 425 aa13.63□□□□□ -0.23
CCDC8-201ENST00000307522 DAZAP2Q15038 168 aaPredicted RBP13.63□□□□□ -0.23
CCDC8-201ENST00000307522 OR4B1Q8NGF8 309 aa13.63□□□□□ -0.23
CCDC8-201ENST00000307522 COL6A6A6NMZ7 2263 aa13.63□□□□□ -0.23
CCDC8-201ENST00000307522 TLX3O43711 291 aaPredicted RBP13.63□□□□□ -0.23
CCDC8-201ENST00000307522 RBMXL2O75526 392 aaKnown RBP13.63□□□□□ -0.23
CCDC8-201ENST00000307522 TUSC2O75896 110 aa13.63□□□□□ -0.23
CCDC8-201ENST00000307522 IGKV1-5P01602 117 aa13.63□□□□□ -0.23
CCDC8-201ENST00000307522 C3orf79P0CE67 100 aa13.63□□□□□ -0.23
CCDC8-201ENST00000307522 BCL3P20749 454 aa13.63□□□□□ -0.23
CCDC8-201ENST00000307522 FXYD3Q14802 87 aa13.63□□□□□ -0.23
CCDC8-201ENST00000307522 GCNT2Q8N0V5 402 aa13.63□□□□□ -0.23
CCDC8-201ENST00000307522 OCC1Q8TAD7 63 aa13.63□□□□□ -0.23
CCDC8-201ENST00000307522 BCL2L2Q92843 193 aaPredicted RBP13.63□□□□□ -0.23
CCDC8-201ENST00000307522 ZDHHC16Q969W1 377 aa13.63□□□□□ -0.23
CCDC8-201ENST00000307522 PKDREJQ9NTG1 2253 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 RAB29O14966 203 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 DHHO43323 396 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 NEURL1O76050 574 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 MSR1P21757 451 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 CTRLP40313 264 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 OR8I2Q8N0Y5 310 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 CST9LQ9H4G1 147 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 NAT8BQ9UHF3 227 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 IGHV2OR16-5A0A0B4J2B6 119 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 SAP30O75446 220 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 KRASP01116 189 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 GPX1P07203 203 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 LCN2P80188 198 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 OR4A47Q6IF82 309 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 TUSC5Q8IXB3 177 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 GJC3Q8NFK1 279 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 CRIM1Q9NZV1 1036 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 TNRC6BQ9UPQ9 1833 aaKnown RBP13.62□□□□□ -0.23
CCDC8-201ENST00000307522 ZNF891A8MT65 544 aaPredicted RBP13.62□□□□□ -0.23
CCDC8-201ENST00000307522 PRSS47A8MTI9 375 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 RBM11P57052 281 aaKnown RBP13.62□□□□□ -0.23
CCDC8-201ENST00000307522 PAFAH1B2P68402 229 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 SERF2P84101 59 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 MRPL54Q6P161 138 aaKnown RBP13.62□□□□□ -0.23
CCDC8-201ENST00000307522 RAB40CQ96S21 281 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 RNF2Q99496 336 aa13.62□□□□□ -0.23
CCDC8-201ENST00000307522 TMEM238C9JI98 176 aa13.61□□□□□ -0.23
CCDC8-201ENST00000307522 ZNF32P17041 273 aa13.61□□□□□ -0.23
CCDC8-201ENST00000307522 LINC00205P59089 165 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms