RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 HIST1H1BP16401 226 aaKnown RBP15.74■□□□□ 0.11
PCDH1-201ENST00000287008 RRN3P1Q2M238 152 aa15.74■□□□□ 0.11
PCDH1-201ENST00000287008 LINC00114Q6XXX2 140 aa15.74■□□□□ 0.11
PCDH1-201ENST00000287008 C12orf77C9JDV5 145 aa15.74■□□□□ 0.11
PCDH1-201ENST00000287008 DEDDO75618 318 aa15.74■□□□□ 0.11
PCDH1-201ENST00000287008 G0S2P27469 103 aa15.74■□□□□ 0.11
PCDH1-201ENST00000287008 UCP3P55916 312 aa15.74■□□□□ 0.11
PCDH1-201ENST00000287008 CCKARP32238 428 aa15.74■□□□□ 0.11
PCDH1-201ENST00000287008 RAB9AP51151 201 aa15.74■□□□□ 0.11
PCDH1-201ENST00000287008 NPDC1Q9NQX5 325 aaPredicted RBP15.74■□□□□ 0.11
PCDH1-201ENST00000287008 TAF15Q92804 592 aaKnown RBP eCLIP15.73■□□□□ 0.11
PCDH1-201ENST00000287008 TXNDC17Q9BRA2 123 aa15.73■□□□□ 0.11
PCDH1-201ENST00000287008 OR5AC2Q9NZP5 309 aa15.73■□□□□ 0.11
PCDH1-201ENST00000287008 CD300CQ08708 224 aa15.73■□□□□ 0.11
PCDH1-201ENST00000287008 C11orf91Q3C1V1 193 aa15.73■□□□□ 0.11
PCDH1-201ENST00000287008 NPPCP23582 126 aa15.73■□□□□ 0.11
PCDH1-201ENST00000287008 MIC13Q5XKP0 118 aa15.73■□□□□ 0.11
PCDH1-201ENST00000287008 ISLRO14498 428 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 ZG16O60844 167 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 CELA3BP08861 270 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 MEF2CQ06413 473 aaPredicted RBP15.72■□□□□ 0.11
PCDH1-201ENST00000287008 SELENOHQ8IZQ5 122 aaKnown RBP15.72■□□□□ 0.11
PCDH1-201ENST00000287008 ELF5Q9UKW6 265 aaPredicted RBP15.72■□□□□ 0.11
PCDH1-201ENST00000287008 PGPA6NDG6 321 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 A8MWL6 223 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 RPL13AP40429 203 aaKnown RBP15.72■□□□□ 0.11
PCDH1-201ENST00000287008 ATP5IP56385 69 aaPredicted RBP15.72■□□□□ 0.11
PCDH1-201ENST00000287008 IQCJQ1A5X6 159 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 ZNF880Q6PDB4 577 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 NUP37Q8NFH4 326 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 EEF1AKMT3Q96AZ1 226 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 IGHV3OR16-12A0A075B7B8 117 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 IQCF6A8MYZ5 107 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 ASPHD2Q6ICH7 369 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 OSR1Q8TAX0 266 aaPredicted RBP15.72■□□□□ 0.11
PCDH1-201ENST00000287008 MESP1Q9BRJ9 268 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 DNAJC4Q9NNZ3 241 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 AURKAIP1Q9NWT8 199 aaPredicted RBP15.72■□□□□ 0.11
PCDH1-201ENST00000287008 REG1AP05451 166 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 HNRNPA3P51991 378 aaKnown RBP15.72■□□□□ 0.11
PCDH1-201ENST00000287008 DLK1P80370 383 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 ZNF818PQ6ZRF7 136 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 C1QL2Q7Z5L3 287 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 RAX2Q96IS3 184 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 MRPL13Q9BYD1 178 aaKnown RBP15.72■□□□□ 0.11
PCDH1-201ENST00000287008 LCTP09848 1927 aa15.72■□□□□ 0.11
PCDH1-201ENST00000287008 IGHV3-35A0A0C4DH35 117 aa15.71■□□□□ 0.11
PCDH1-201ENST00000287008 BCL2P10415 239 aa15.71■□□□□ 0.11
PCDH1-201ENST00000287008 RELQ04864 619 aaPredicted RBP15.71■□□□□ 0.11
PCDH1-201ENST00000287008 TBR1Q16650 682 aa15.71■□□□□ 0.11
PCDH1-201ENST00000287008 CBLN4Q9NTU7 201 aa15.71■□□□□ 0.11
PCDH1-201ENST00000287008 SEMA5BQ9P283 1151 aa15.71■□□□□ 0.11
PCDH1-201ENST00000287008 ADAM11O75078 769 aa15.71■□□□□ 0.11
PCDH1-201ENST00000287008 VKORC1L1Q8N0U8 176 aa15.71■□□□□ 0.11
PCDH1-201ENST00000287008 EIF4E3Q8N5X7 224 aaKnown RBP15.71■□□□□ 0.11
PCDH1-201ENST00000287008 SLC16A13Q7RTY0 426 aa15.71■□□□□ 0.11
PCDH1-201ENST00000287008 OR51G1Q8NGK1 321 aa15.71■□□□□ 0.11
PCDH1-201ENST00000287008 C5orf66Q9H5L9 145 aa15.71■□□□□ 0.11
PCDH1-201ENST00000287008 YAE1D1Q9NRH1 226 aa15.71■□□□□ 0.11
PCDH1-201ENST00000287008 C7orf77A4D0Y5 90 aa15.71■□□□□ 0.1
PCDH1-201ENST00000287008 Q6ZN92 141 aa15.71■□□□□ 0.1
PCDH1-201ENST00000287008 OR10D4PQ8NGN7 298 aa15.71■□□□□ 0.1
PCDH1-201ENST00000287008 ZNF236Q9UL36 1845 aa15.71■□□□□ 0.1
PCDH1-201ENST00000287008 TRGV3P03979 118 aa15.7■□□□□ 0.1
PCDH1-201ENST00000287008 UNQ6494/PRO21346Q6UXR6 183 aa15.7■□□□□ 0.1
PCDH1-201ENST00000287008 FAM90A1Q86YD7 464 aa15.7■□□□□ 0.1
PCDH1-201ENST00000287008 MRPL37Q9BZE1 423 aaKnown RBP15.7■□□□□ 0.1
PCDH1-201ENST00000287008 H3BQ15 152 aa15.7■□□□□ 0.1
PCDH1-201ENST00000287008 NPIPB3Q92617 1050 aa15.7■□□□□ 0.1
PCDH1-201ENST00000287008 PTPRQQ9UMZ3 2332 aa15.7■□□□□ 0.1
PCDH1-201ENST00000287008 SCGB1C2P0DMR2 95 aa15.7■□□□□ 0.1
PCDH1-201ENST00000287008 SMAGPQ0VAQ4 97 aa15.7■□□□□ 0.1
PCDH1-201ENST00000287008 HLA-DRB5Q30154 266 aa15.7■□□□□ 0.1
PCDH1-201ENST00000287008 STPG2Q8N412 459 aa15.7■□□□□ 0.1
PCDH1-201ENST00000287008 CGB1A6NKQ9 187 aa15.7■□□□□ 0.1
PCDH1-201ENST00000287008 NPIPB7O75200 414 aa15.7■□□□□ 0.1
PCDH1-201ENST00000287008 C8orf88P0DMB2 117 aa15.7■□□□□ 0.1
PCDH1-201ENST00000287008 IFITM3Q01628 133 aa15.7■□□□□ 0.1
PCDH1-201ENST00000287008 PMS2P11Q13670 270 aa15.7■□□□□ 0.1
PCDH1-201ENST00000287008 ZNF146Q15072 292 aa15.7■□□□□ 0.1
PCDH1-201ENST00000287008 RPL39P5Q59GN2 51 aa15.7■□□□□ 0.1
PCDH1-201ENST00000287008 PSME4Q14997 1843 aa15.69■□□□□ 0.1
PCDH1-201ENST00000287008 PATJQ8NI35 1801 aa15.69■□□□□ 0.1
PCDH1-201ENST00000287008 KBTBD11-OT1A0A1B0GTJ5 212 aa15.69■□□□□ 0.1
PCDH1-201ENST00000287008 MFAP2P55001 183 aa15.69■□□□□ 0.1
PCDH1-201ENST00000287008 SMDT1Q9H4I9 107 aa15.69■□□□□ 0.1
PCDH1-201ENST00000287008 IL36RNQ9UBH0 155 aa15.69■□□□□ 0.1
PCDH1-201ENST00000287008 FBXL15Q9H469 300 aa15.69■□□□□ 0.1
PCDH1-201ENST00000287008 LYRM2Q9NU23 88 aaPredicted RBP15.69■□□□□ 0.1
PCDH1-201ENST00000287008 HSPB7Q9UBY9 170 aa15.69■□□□□ 0.1
PCDH1-201ENST00000287008 TMEM189A5PLL7 270 aa15.69■□□□□ 0.1
PCDH1-201ENST00000287008 KCNAB3O43448 404 aa15.69■□□□□ 0.1
PCDH1-201ENST00000287008 HKR1P10072 659 aa15.69■□□□□ 0.1
PCDH1-201ENST00000287008 SPRR3Q9UBC9 169 aa15.69■□□□□ 0.1
PCDH1-201ENST00000287008 M0R2Z0 102 aa15.68■□□□□ 0.1
PCDH1-201ENST00000287008 ISOC2Q96AB3 205 aa15.68■□□□□ 0.1
PCDH1-201ENST00000287008 GREB1Q4ZG55 1949 aa15.68■□□□□ 0.1
PCDH1-201ENST00000287008 PINLYPA6NC86 204 aa15.68■□□□□ 0.1
PCDH1-201ENST00000287008 MAS1LP35410 378 aa15.68■□□□□ 0.1
PCDH1-201ENST00000287008 HERVK_113P61574 105 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms