RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 SMIM3Q9BZL3 60 aa14.77□□□□□ -0.05
VIM-201ENST00000224237 TMEM140Q9NV12 185 aa14.77□□□□□ -0.05
VIM-201ENST00000224237 CENPEQ02224 2701 aa14.77□□□□□ -0.05
VIM-201ENST00000224237 FBN2P35556 2912 aa14.77□□□□□ -0.05
VIM-201ENST00000224237 IGLV1-47P01700 117 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 OR9G9P0C7N8 305 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 IAPPP10997 89 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 POU2AF1Q16633 256 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 AARDQ4LEZ3 155 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 VKORC1L1Q8N0U8 176 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 ZNF295-AS1Q8N0V1 137 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 SMIM8Q96KF7 97 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 RHOVQ96L33 236 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 CXorf58Q96LI9 332 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 PCGF1Q9BSM1 259 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 CACFD1Q9UGQ2 172 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 ARHGAP32A7KAX9 2087 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 H0YJW9 148 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 TXNL1O43396 289 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 PLA2G2AP14555 144 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 REG1BP48304 166 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 DLX1P56177 255 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 HSD17B13Q7Z5P4 300 aaPredicted RBP14.76□□□□□ -0.05
VIM-201ENST00000224237 STX12Q86Y82 276 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 TGIF2LXQ8IUE1 241 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 UBAC2Q8NBM4 344 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 OR13D1Q8NGV5 346 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 OR4A16Q8NH70 328 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 LRRC20Q8TCA0 184 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 NABP2Q9BQ15 211 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 AIFM2Q9BRQ8 373 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 RBKSQ9H477 322 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 PSENENQ9NZ42 101 aa14.76□□□□□ -0.05
VIM-201ENST00000224237 IGKV1-16P04430 117 aa14.75□□□□□ -0.05
VIM-201ENST00000224237 PRB3Q04118 309 aaPredicted RBP14.75□□□□□ -0.05
VIM-201ENST00000224237 Q8N7P7 452 aa14.75□□□□□ -0.05
VIM-201ENST00000224237 OSR1Q8TAX0 266 aaPredicted RBP14.75□□□□□ -0.05
VIM-201ENST00000224237 BSCL2Q96G97 398 aaPredicted RBP14.75□□□□□ -0.05
VIM-201ENST00000224237 BARX1Q9HBU1 254 aaPredicted RBP14.75□□□□□ -0.05
VIM-201ENST00000224237 AMMECR1Q9Y4X0 333 aaPredicted RBP14.75□□□□□ -0.05
VIM-201ENST00000224237 BORCS7-ASMTA0A0B4J1R7 106 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 H3BP45 60 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 ENSAO43768 121 aaKnown RBP14.74□□□□□ -0.05
VIM-201ENST00000224237 ARF6P62330 175 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 OR4A47Q6IF82 309 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 PDPNQ86YL7 162 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 KIR3DL3Q8N743 410 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 CIB3Q96Q77 187 aaPredicted RBP14.74□□□□□ -0.05
VIM-201ENST00000224237 A8MXK9 166 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 H7C2Y5 167 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 COX7A1P24310 79 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 SULT1A1P50225 295 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 RAB13P51153 203 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 OR2B8PP59922 312 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 RELBQ01201 579 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 DIAPH2-AS1Q14236 149 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 ZNF266Q14584 549 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 EIF5AL1Q6IS14 154 aaKnown RBP14.74□□□□□ -0.05
VIM-201ENST00000224237 C1orf122Q6ZSJ8 110 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 ZNF429Q86V71 674 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 OR52E5Q8NH55 327 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 CLDND2Q8NHS1 167 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 RBMXL1Q96E39 390 aaKnown RBP14.74□□□□□ -0.05
VIM-201ENST00000224237 PIMREGQ9BSJ6 248 aa14.74□□□□□ -0.05
VIM-201ENST00000224237 QTRT1Q9BXR0 403 aaKnown RBP14.74□□□□□ -0.05
VIM-201ENST00000224237 CELSR2Q9HCU4 2923 aa14.73□□□□□ -0.05
VIM-201ENST00000224237 BUB1B-PAK6H3BSN5 160 aa14.73□□□□□ -0.05
VIM-201ENST00000224237 NDUFS8O00217 210 aa14.73□□□□□ -0.05
VIM-201ENST00000224237 CST7O76096 145 aa14.73□□□□□ -0.05
VIM-201ENST00000224237 FGF2P09038 288 aa14.73□□□□□ -0.05
VIM-201ENST00000224237 OR4P4Q8NGL7 312 aa14.73□□□□□ -0.05
VIM-201ENST00000224237 OR5C1Q8NGR4 320 aa14.73□□□□□ -0.05
VIM-201ENST00000224237 DTD1Q8TEA8 209 aa14.73□□□□□ -0.05
VIM-201ENST00000224237 WFDC1Q9HC57 220 aa14.73□□□□□ -0.05
VIM-201ENST00000224237 MED13LQ71F56 2210 aa14.73□□□□□ -0.05
VIM-201ENST00000224237 C15orf61A6NNL5 157 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 KRBOX1C9JBD0 128 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 LY86O95711 162 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 PRTN3P24158 256 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 ZFP36P26651 326 aaKnown RBP14.72□□□□□ -0.05
VIM-201ENST00000224237 MC5RP33032 325 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 ATP5J2P56134 94 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 LMO4P61968 165 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 PDLIM3Q53GG5 364 aaPredicted RBP14.72□□□□□ -0.05
VIM-201ENST00000224237 TMEM177Q53S58 311 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 FAM74A1Q5RGS3 127 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 PNKDQ8N490 385 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 OR4C13Q8NGP0 309 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 FAM168AQ92567 244 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 FLYWCH2Q96CP2 140 aaKnown RBP14.72□□□□□ -0.05
VIM-201ENST00000224237 HARBI1Q96MB7 349 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 SIRT7Q9NRC8 400 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 WASHC3Q9Y3C0 194 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 KPTNQ9Y664 436 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 CEBPZOSA8MTT3 80 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 IFNA17P01571 189 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 DYNLT3P51808 116 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 SPCS3P61009 180 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 SPANXN5Q5MJ07 72 aa14.72□□□□□ -0.05
VIM-201ENST00000224237 TMEM217Q8N7C4 229 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms