RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 SPCS3P61009 180 aa14.08□□□□□ -0.15
RABGGTA-201ENST00000216840 SLC25A24Q6NUK1 477 aa14.08□□□□□ -0.15
RABGGTA-201ENST00000216840 C8orf31Q8N9H6 132 aa14.08□□□□□ -0.15
RABGGTA-201ENST00000216840 OR52E5Q8NH55 327 aa14.08□□□□□ -0.15
RABGGTA-201ENST00000216840 ZNF596Q8TC21 504 aa14.08□□□□□ -0.15
RABGGTA-201ENST00000216840 RBMXL1Q96E39 390 aaKnown RBP14.08□□□□□ -0.15
RABGGTA-201ENST00000216840 MS4A7Q9GZW8 240 aaPredicted RBP14.08□□□□□ -0.15
RABGGTA-201ENST00000216840 TREM1Q9NP99 234 aa14.08□□□□□ -0.15
RABGGTA-201ENST00000216840 RALYQ9UKM9 306 aaKnown RBP14.08□□□□□ -0.15
RABGGTA-201ENST00000216840 IFNA17P01571 189 aa14.08□□□□□ -0.16
RABGGTA-201ENST00000216840 AGAP20933 346 aa14.08□□□□□ -0.16
RABGGTA-201ENST00000216840 LRRC75BQ2VPJ9 315 aa14.08□□□□□ -0.16
RABGGTA-201ENST00000216840 PDLIM3Q53GG5 364 aaPredicted RBP14.08□□□□□ -0.16
RABGGTA-201ENST00000216840 AVPI1Q5T686 147 aa14.08□□□□□ -0.16
RABGGTA-201ENST00000216840 OR4A47Q6IF82 309 aa14.08□□□□□ -0.16
RABGGTA-201ENST00000216840 LINC00311Q8N616 119 aa14.08□□□□□ -0.16
RABGGTA-201ENST00000216840 SCGB1C1Q8TD33 95 aa14.08□□□□□ -0.16
RABGGTA-201ENST00000216840 RHOVQ96L33 236 aa14.08□□□□□ -0.16
RABGGTA-201ENST00000216840 LY6HO94772 140 aa14.07□□□□□ -0.16
RABGGTA-201ENST00000216840 SNCAP37840 140 aa14.07□□□□□ -0.16
RABGGTA-201ENST00000216840 POU2AF1Q16633 256 aa14.07□□□□□ -0.16
RABGGTA-201ENST00000216840 C11orf42Q8N5U0 333 aa14.07□□□□□ -0.16
RABGGTA-201ENST00000216840 PARD6GQ9BYG4 376 aaPredicted RBP14.07□□□□□ -0.16
RABGGTA-201ENST00000216840 SLC35D1Q9NTN3 355 aa14.07□□□□□ -0.16
RABGGTA-201ENST00000216840 UQCC1Q9NVA1 299 aa14.07□□□□□ -0.16
RABGGTA-201ENST00000216840 HRNRQ86YZ3 2850 aaPredicted RBP14.07□□□□□ -0.16
RABGGTA-201ENST00000216840 A0A087X0M5 115 aa14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 A0A1B0GX30 115 aa14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 A0A1W2PPR1 153 aa14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 RNASEK-C17orf49H0YIS7 233 aa14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 J3QR06 171 aa14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 CD5P06127 495 aa14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 OR8U8P0C7N1 319 aa14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 ADCYAP1P18509 176 aa14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 ZNF429Q86V71 674 aa14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 COMMD1Q8N668 190 aa14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 RSG1Q9BU20 258 aa14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 MRPL20Q9BYC9 149 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 FBXO7Q9Y3I1 522 aa14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 C15orf61A6NNL5 157 aa14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 HRASP01112 189 aa14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 IGHV1-8P0DP01 117 aa14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 RTL8BQ17RB0 113 aa14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 DHRS7BQ6IAN0 325 aaPredicted RBP14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 DTX2Q86UW9 622 aa14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 WDR61Q9GZS3 305 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-201ENST00000216840 C15orf62A8K5M9 175 aa14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 LY86O95711 162 aa14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 IGKV1-16P04430 117 aa14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 VDAC2P45880 294 aaPredicted RBP14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 RPS16P62249 146 aaKnown RBP14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 ATP6V1FQ16864 119 aa14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 C10orf91Q5T1B1 145 aa14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 AKR1C8PQ5T2L2 129 aa14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 OR13D1Q8NGV5 346 aa14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 NEU4Q8WWR8 484 aaPredicted RBP14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 PSMG3Q9BT73 122 aaPredicted RBP14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 MALRD1Q5VYJ5 2156 aa14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 UBE2L5PA0A1B0GUS4 154 aa14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 ARG1P05089 322 aa14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 IL6RP08887 468 aaPredicted RBP14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 DVL1P1P54792 670 aaPredicted RBP14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 OR10P1Q8NGE3 313 aa14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 OR10X1Q8NGY0 326 aa14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 SCRT1Q9BWW7 348 aa14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 TCF19Q9Y242 345 aa14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 FOXA2Q9Y261 457 aaPredicted RBP14.05□□□□□ -0.16
RABGGTA-201ENST00000216840 LRBAP50851 2863 aa14.04□□□□□ -0.16
RABGGTA-201ENST00000216840 SRRM4A7MD48 611 aaKnown RBP14.04□□□□□ -0.16
RABGGTA-201ENST00000216840 GNB2P62879 340 aa14.04□□□□□ -0.16
RABGGTA-201ENST00000216840 DEFA5Q01523 94 aa14.04□□□□□ -0.16
RABGGTA-201ENST00000216840 FAM71F2Q6NXP2 309 aa14.04□□□□□ -0.16
RABGGTA-201ENST00000216840 ATRAIDQ6UW56 229 aa14.04□□□□□ -0.16
RABGGTA-201ENST00000216840 DPPA3Q6W0C5 159 aa14.04□□□□□ -0.16
RABGGTA-201ENST00000216840 OR9G1Q8NH87 305 aa14.04□□□□□ -0.16
RABGGTA-201ENST00000216840 TAF15Q92804 592 aaKnown RBP eCLIP14.04□□□□□ -0.16
RABGGTA-201ENST00000216840 ST6GALNAC6Q969X2 333 aa14.04□□□□□ -0.16
RABGGTA-201ENST00000216840 PINX1Q96BK5 328 aaKnown RBP14.04□□□□□ -0.16
RABGGTA-201ENST00000216840 TMEM147Q9BVK8 224 aa14.04□□□□□ -0.16
RABGGTA-201ENST00000216840 TMEM14BQ9NUH8 114 aa14.04□□□□□ -0.16
RABGGTA-201ENST00000216840 C9JQL5 133 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 H0YJW9 148 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 C19orf84I3L1E1 186 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 GPR37O15354 613 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 DIAPH2-AS1Q14236 149 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 SPSB3Q6PJ21 355 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 ABHD12Q8N2K0 398 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 OR5AN1Q8NGI8 311 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 TMEM186Q96B77 213 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 CLCC1Q96S66 551 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 TMEM133Q9H2Q1 129 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 MIOXQ9UGB7 285 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 A0A1B0GV50 99 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 FAM157AC9JC47 383 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 F8W036 122 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 APOA2P02652 100 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 REG1BP48304 166 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 SP5Q6BEB4 398 aaPredicted RBP14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 OR8B3Q8NGG8 313 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 OR8B2Q96RD0 313 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms