RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 LSG1Q9H089 658 aaKnown RBP16.44■□□□□ 0.22
SCARB2-216ENST00000639300 DBNLQ9UJU6 430 aaKnown RBP16.44■□□□□ 0.22
SCARB2-216ENST00000639300 ZHX1Q9UKY1 873 aaPredicted RBP16.44■□□□□ 0.22
SCARB2-216ENST00000639300 V9GY48 417 aaPredicted RBP16.44■□□□□ 0.22
SCARB2-216ENST00000639300 CTDSPL2Q05D32 466 aa16.44■□□□□ 0.22
SCARB2-216ENST00000639300 KARSQ15046 597 aaKnown RBP16.44■□□□□ 0.22
SCARB2-216ENST00000639300 TTC6Q86TZ1 520 aa16.44■□□□□ 0.22
SCARB2-216ENST00000639300 JADE2Q9NQC1 790 aa16.44■□□□□ 0.22
SCARB2-216ENST00000639300 ZNF532Q9HCE3 1301 aa16.44■□□□□ 0.22
SCARB2-216ENST00000639300 USP6P35125 1406 aa16.44■□□□□ 0.22
SCARB2-216ENST00000639300 HLA-DOAP06340 250 aa16.43■□□□□ 0.22
SCARB2-216ENST00000639300 MYL5Q02045 173 aa16.43■□□□□ 0.22
SCARB2-216ENST00000639300 TAX1BP1Q86VP1 789 aa16.43■□□□□ 0.22
SCARB2-216ENST00000639300 GTF3C6Q969F1 213 aa16.43■□□□□ 0.22
SCARB2-216ENST00000639300 TMEM87BQ96K49 555 aa16.43■□□□□ 0.22
SCARB2-216ENST00000639300 KDRP35968 1356 aa16.43■□□□□ 0.22
SCARB2-216ENST00000639300 GSTO1P78417 241 aa16.43■□□□□ 0.22
SCARB2-216ENST00000639300 PSMA7O14818 248 aa16.43■□□□□ 0.22
SCARB2-216ENST00000639300 KRT2P35908 639 aa16.43■□□□□ 0.22
SCARB2-216ENST00000639300 CUL5Q93034 780 aa16.43■□□□□ 0.22
SCARB2-216ENST00000639300 RMND1Q9NWS8 449 aa16.43■□□□□ 0.22
SCARB2-216ENST00000639300 RTCBQ9Y3I0 505 aaKnown RBP16.43■□□□□ 0.22
SCARB2-216ENST00000639300 SLU7O95391 586 aaKnown RBP16.43■□□□□ 0.22
SCARB2-216ENST00000639300 KRT40Q6A162 431 aa16.43■□□□□ 0.22
SCARB2-216ENST00000639300 LZTFL1Q9NQ48 299 aa16.43■□□□□ 0.22
SCARB2-216ENST00000639300 KCNH3Q9ULD8 1083 aa16.43■□□□□ 0.22
SCARB2-216ENST00000639300 IGSF3O75054 1194 aa16.42■□□□□ 0.22
SCARB2-216ENST00000639300 ZNF202O95125 648 aa16.42■□□□□ 0.22
SCARB2-216ENST00000639300 SSR1P43307 286 aaKnown RBP16.42■□□□□ 0.22
SCARB2-216ENST00000639300 DRC1Q96MC2 740 aa16.42■□□□□ 0.22
SCARB2-216ENST00000639300 ATP7BP35670 1465 aa16.42■□□□□ 0.22
SCARB2-216ENST00000639300 UBAP1LF5GYI3 381 aa16.42■□□□□ 0.22
SCARB2-216ENST00000639300 SPAG1Q07617 926 aa16.42■□□□□ 0.22
SCARB2-216ENST00000639300 USP28Q96RU2 1077 aa16.42■□□□□ 0.22
SCARB2-216ENST00000639300 PUS3Q9BZE2 481 aaKnown RBP16.42■□□□□ 0.22
SCARB2-216ENST00000639300 SLAIN2Q9P270 581 aa16.42■□□□□ 0.22
SCARB2-216ENST00000639300 HSPD1P10809 573 aaKnown RBP16.42■□□□□ 0.22
SCARB2-216ENST00000639300 CALML3P27482 149 aa16.42■□□□□ 0.22
SCARB2-216ENST00000639300 LPIN2Q92539 896 aa16.42■□□□□ 0.22
SCARB2-216ENST00000639300 ELP1O95163 1332 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 ADD1P35611 737 aaKnown RBP16.41■□□□□ 0.22
SCARB2-216ENST00000639300 BMS1Q14692 1282 aaKnown RBP16.41■□□□□ 0.22
SCARB2-216ENST00000639300 MAP4K1Q92918 833 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 KCNJ14Q9UNX9 436 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 GNPATO15228 680 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 POLR2DO15514 142 aaKnown RBP16.41■□□□□ 0.22
SCARB2-216ENST00000639300 KIF20AO95235 890 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 LDHBP07195 334 aaKnown RBP16.41■□□□□ 0.22
SCARB2-216ENST00000639300 CALM1P0DP23 149 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 CALM2P0DP24 149 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 CALM3P0DP25 149 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 NOP2P46087 812 aaKnown RBP16.41■□□□□ 0.22
SCARB2-216ENST00000639300 VPS36Q86VN1 386 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 FEZ1Q99689 392 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 MAPK8IP1Q9UQF2 711 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 NR1I2O75469 434 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 GTF2F1P35269 517 aaKnown RBP eCLIP16.41■□□□□ 0.22
SCARB2-216ENST00000639300 RILPL1Q5EBL4 403 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 COPRSQ9NQ92 184 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 EFCAB6Q5THR3 1501 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 IQUBQ8NA54 791 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 CTAGE1Q96RT6 745 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 TFCP2L1Q9NZI6 479 aa16.41■□□□□ 0.22
SCARB2-216ENST00000639300 ZNF75DP51815 510 aa16.4■□□□□ 0.22
SCARB2-216ENST00000639300 DSCC1Q9BVC3 393 aa16.4■□□□□ 0.22
SCARB2-216ENST00000639300 ZC3H12CQ9C0D7 883 aaKnown RBP16.4■□□□□ 0.22
SCARB2-216ENST00000639300 USP8P40818 1118 aa16.4■□□□□ 0.22
SCARB2-216ENST00000639300 TNNI2P48788 182 aa16.4■□□□□ 0.22
SCARB2-216ENST00000639300 ST5P78524 1137 aa16.4■□□□□ 0.22
SCARB2-216ENST00000639300 MCM6Q14566 821 aa16.4■□□□□ 0.22
SCARB2-216ENST00000639300 SSH2Q76I76 1423 aa16.4■□□□□ 0.22
SCARB2-216ENST00000639300 RTL9Q8NET4 1388 aa16.4■□□□□ 0.22
SCARB2-216ENST00000639300 TMCO5BA8MYB1 307 aa16.4■□□□□ 0.22
SCARB2-216ENST00000639300 MAP9Q49MG5 647 aa16.4■□□□□ 0.22
SCARB2-216ENST00000639300 ZNF589Q86UQ0 364 aaPredicted RBP16.4■□□□□ 0.22
SCARB2-216ENST00000639300 MMRN2Q9H8L6 949 aa16.4■□□□□ 0.22
SCARB2-216ENST00000639300 RIMBP2O15034 1052 aa16.4■□□□□ 0.22
SCARB2-216ENST00000639300 HAUS7Q99871 368 aa16.4■□□□□ 0.22
SCARB2-216ENST00000639300 FGAP02671 866 aa16.39■□□□□ 0.21
SCARB2-216ENST00000639300 NEFHP12036 1026 aa16.39■□□□□ 0.21
SCARB2-216ENST00000639300 FAM114A1Q8IWE2 563 aa16.39■□□□□ 0.21
SCARB2-216ENST00000639300 TSC1Q92574 1164 aa16.39■□□□□ 0.21
SCARB2-216ENST00000639300 STAMQ92783 540 aa16.39■□□□□ 0.21
SCARB2-216ENST00000639300 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.39■□□□□ 0.21
SCARB2-216ENST00000639300 KIF1BO60333 1816 aa16.39■□□□□ 0.21
SCARB2-216ENST00000639300 CCDC175P0C221 793 aa16.39■□□□□ 0.21
SCARB2-216ENST00000639300 DTHD1Q6ZMT9 781 aa16.39■□□□□ 0.21
SCARB2-216ENST00000639300 SPATA5Q8NB90 893 aa16.39■□□□□ 0.21
SCARB2-216ENST00000639300 NYXQ9GZU5 481 aa16.39■□□□□ 0.21
SCARB2-216ENST00000639300 WWC3Q9ULE0 1092 aa16.39■□□□□ 0.21
SCARB2-216ENST00000639300 TRPM1Q7Z4N2 1603 aa16.39■□□□□ 0.21
SCARB2-216ENST00000639300 KIAA0754O94854 1291 aa16.39■□□□□ 0.21
SCARB2-216ENST00000639300 DEXIO95424 95 aa16.39■□□□□ 0.21
SCARB2-216ENST00000639300 HLTFQ14527 1009 aaKnown RBP eCLIP16.39■□□□□ 0.21
SCARB2-216ENST00000639300 TNIP1Q15025 636 aa16.39■□□□□ 0.21
SCARB2-216ENST00000639300 PARP10Q53GL7 1025 aa16.39■□□□□ 0.21
SCARB2-216ENST00000639300 CMTR1Q8N1G2 835 aaKnown RBP16.39■□□□□ 0.21
SCARB2-216ENST00000639300 ZCCHC11Q5TAX3 1644 aaKnown RBP16.38■□□□□ 0.21
SCARB2-216ENST00000639300 SAP30BPQ9UHR5 308 aaKnown RBP16.38■□□□□ 0.21
SCARB2-216ENST00000639300 CYP21A2P08686 494 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms