RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 ESYT2A0FGR8 921 aa18.34■□□□□ 0.53
CACNA1A-258ENST00000638029 MARCKSP29966 332 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-258ENST00000638029 OATP04181 439 aa18.33■□□□□ 0.53
CACNA1A-258ENST00000638029 TNNI2P48788 182 aa18.33■□□□□ 0.53
CACNA1A-258ENST00000638029 CCDC122Q5T0U0 273 aa18.33■□□□□ 0.53
CACNA1A-258ENST00000638029 ZBTB33Q86T24 672 aa18.33■□□□□ 0.53
CACNA1A-258ENST00000638029 NSMCE1Q8WV22 266 aa18.33■□□□□ 0.53
CACNA1A-258ENST00000638029 DCLK2Q8N568 766 aa18.33■□□□□ 0.53
CACNA1A-258ENST00000638029 ATP2A2P16615 1042 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-258ENST00000638029 CCT6AP40227 531 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-258ENST00000638029 SLFN5Q08AF3 891 aa18.33■□□□□ 0.52
CACNA1A-258ENST00000638029 NCOA7Q8NI08 942 aa18.33■□□□□ 0.52
CACNA1A-258ENST00000638029 ARHGEF2Q92974 986 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-258ENST00000638029 DAPK1P53355 1430 aa18.33■□□□□ 0.52
CACNA1A-258ENST00000638029 TCIRG1Q13488 830 aa18.33■□□□□ 0.52
CACNA1A-258ENST00000638029 STIM2Q9P246 746 aa18.33■□□□□ 0.52
CACNA1A-258ENST00000638029 KARSQ15046 597 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-258ENST00000638029 BSPRYQ5W0U4 402 aa18.33■□□□□ 0.52
CACNA1A-258ENST00000638029 CCDC77Q9BR77 488 aa18.33■□□□□ 0.52
CACNA1A-258ENST00000638029 ARFGAP3Q9NP61 516 aa18.33■□□□□ 0.52
CACNA1A-258ENST00000638029 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.33■□□□□ 0.52
CACNA1A-258ENST00000638029 HPDP32754 393 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 RNF217Q8TC41 542 aa18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 TEX13AQ9BXU3 409 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 MRPL46Q9H2W6 279 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 TRPC3Q13507 836 aa18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 KRT28Q7Z3Y7 464 aa18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 GOLGA6L9A6NEM1 432 aa18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 RHOXF2BP0C7M4 288 aa18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 SKIV2LQ15477 1246 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 ACBD5Q5T8D3 534 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 PSPC1Q8WXF1 523 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 RHOXF2Q9BQY4 288 aa18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 GPCPD1Q9NPB8 672 aa18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 INF2Q27J81 1249 aa18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 CXorf38Q8TB03 319 aa18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 MORC4Q8TE76 937 aa18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 CASQ2O14958 399 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 FAM204AQ9H8W3 233 aa18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 STX10O60499 249 aa18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 NAA16Q6N069 864 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 SSH1Q8WYL5 1049 aa18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 NLRP3Q96P20 1036 aa18.32■□□□□ 0.52
CACNA1A-258ENST00000638029 FCHSD1Q86WN1 690 aa18.31■□□□□ 0.52
CACNA1A-258ENST00000638029 INPP1P49441 399 aa18.31■□□□□ 0.52
CACNA1A-258ENST00000638029 ZGPATQ8N5A5 531 aaKnown RBP18.31■□□□□ 0.52
CACNA1A-258ENST00000638029 MIGA1Q8NAN2 632 aa18.31■□□□□ 0.52
CACNA1A-258ENST00000638029 RMND1Q9NWS8 449 aa18.31■□□□□ 0.52
CACNA1A-258ENST00000638029 KRBA2Q6ZNG9 492 aa18.31■□□□□ 0.52
CACNA1A-258ENST00000638029 PRKAG2Q9UGJ0 569 aa18.31■□□□□ 0.52
CACNA1A-258ENST00000638029 CCDC141Q6ZP82 1450 aa18.31■□□□□ 0.52
CACNA1A-258ENST00000638029 CCDC125Q86Z20 511 aa18.3■□□□□ 0.52
CACNA1A-258ENST00000638029 STK24Q9Y6E0 443 aa18.3■□□□□ 0.52
CACNA1A-258ENST00000638029 DDX19AQ9NUU7 478 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-258ENST00000638029 CAMSAP2Q08AD1 1489 aa18.3■□□□□ 0.52
CACNA1A-258ENST00000638029 MCM5P33992 734 aa18.3■□□□□ 0.52
CACNA1A-258ENST00000638029 CC2D2AQ9P2K1 1620 aa18.3■□□□□ 0.52
CACNA1A-258ENST00000638029 WDR44Q5JSH3 913 aa18.3■□□□□ 0.52
CACNA1A-258ENST00000638029 GIMAP6Q6P9H5 292 aa18.3■□□□□ 0.52
CACNA1A-258ENST00000638029 INTS8Q75QN2 995 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-258ENST00000638029 SMIM24O75264 130 aa18.3■□□□□ 0.52
CACNA1A-258ENST00000638029 RRP36Q96EU6 259 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-258ENST00000638029 NEK1Q96PY6 1258 aa18.3■□□□□ 0.52
CACNA1A-258ENST00000638029 ORC3Q9UBD5 711 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-258ENST00000638029 RTCBQ9Y3I0 505 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-258ENST00000638029 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.3■□□□□ 0.52
CACNA1A-258ENST00000638029 NBPF7P0C2Y1 421 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-258ENST00000638029 USH1GQ495M9 461 aa18.29■□□□□ 0.52
CACNA1A-258ENST00000638029 USTQ9Y2C2 406 aa18.29■□□□□ 0.52
CACNA1A-258ENST00000638029 TCP10Q12799 353 aa18.29■□□□□ 0.52
CACNA1A-258ENST00000638029 PAGR1Q9BTK6 254 aa18.29■□□□□ 0.52
CACNA1A-258ENST00000638029 CCDC102BQ68D86 513 aa18.29■□□□□ 0.52
CACNA1A-258ENST00000638029 PCK1P35558 622 aa18.29■□□□□ 0.52
CACNA1A-258ENST00000638029 ATP11AP98196 1134 aa18.29■□□□□ 0.52
CACNA1A-258ENST00000638029 KIF22Q14807 665 aa18.29■□□□□ 0.52
CACNA1A-258ENST00000638029 GUCA1BQ9UMX6 200 aa18.29■□□□□ 0.52
CACNA1A-258ENST00000638029 NEMFO60524 1076 aa18.29■□□□□ 0.52
CACNA1A-258ENST00000638029 CASP2P42575 452 aa18.29■□□□□ 0.52
CACNA1A-258ENST00000638029 RYBPQ8N488 228 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-258ENST00000638029 LEO1Q8WVC0 666 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-258ENST00000638029 TIAM1Q13009 1591 aa18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 MAGEB6P1A0A0J9YX57 407 aa18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 DHX58Q96C10 678 aa18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 MCM9Q9NXL9 1143 aa18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 PAXBP1Q9Y5B6 917 aa18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 EHBP1Q8NDI1 1231 aa18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 NBPF3Q9H094 633 aa18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 SYKP43405 635 aa18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 STX17P56962 302 aa18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 UBXN1Q04323 297 aa18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 CD2APQ9Y5K6 639 aa18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 CTAGE9A4FU28 777 aa18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 BUB1BO60566 1050 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 ZNF853P0CG23 659 aa18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 CDR2Q01850 454 aa18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 CPXCR1Q8N123 301 aa18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 MRC2Q9UBG0 1479 aa18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 FAM193BQ96PV7 902 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-258ENST00000638029 SNAPC4Q5SXM2 1469 aa18.27■□□□□ 0.52
CACNA1A-258ENST00000638029 SESTD1Q86VW0 696 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms