RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 IFNL2Q8IZJ0 200 aa22.66■■□□□ 1.22
PDLIM3-212ENST00000620787 EYA2O00167 538 aa22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 ANTXR2P58335 489 aa22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 FAM193AP78312 1265 aa22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 ARHGAP29Q52LW3 1261 aa22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 TUBE1Q9UJT0 475 aa22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 ECM29Q5VYK3 1845 aa22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 MYH7P12883 1935 aa22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 CCP110O43303 1012 aa22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 IMMTQ16891 758 aaKnown RBP22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 ISM2Q6H9L7 571 aa22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 TRIM65Q6PJ69 517 aa22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 HOMER1Q86YM7 354 aa22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 RAB11FIP4Q86YS3 637 aa22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 DPF2Q92785 391 aa22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 ZNF594Q96JF6 807 aaPredicted RBP22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 TIGD1Q96MW7 591 aa22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 NLRP2Q9NX02 1062 aa22.65■■□□□ 1.22
PDLIM3-212ENST00000620787 TMX1Q9H3N1 280 aa22.64■■□□□ 1.22
PDLIM3-212ENST00000620787 DNAI1Q9UI46 699 aa22.64■■□□□ 1.22
PDLIM3-212ENST00000620787 FANCGO15287 622 aa22.64■■□□□ 1.21
PDLIM3-212ENST00000620787 SLC39A14Q15043 492 aa22.64■■□□□ 1.21
PDLIM3-212ENST00000620787 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.64■■□□□ 1.21
PDLIM3-212ENST00000620787 PNMA6AP0CW24 399 aaPredicted RBP22.63■■□□□ 1.21
PDLIM3-212ENST00000620787 ZC3H6P61129 1189 aaKnown RBP22.63■■□□□ 1.21
PDLIM3-212ENST00000620787 FGAP02671 866 aa22.63■■□□□ 1.21
PDLIM3-212ENST00000620787 MARCKSP29966 332 aaPredicted RBP22.63■■□□□ 1.21
PDLIM3-212ENST00000620787 CREBRFQ8IUR6 639 aa22.63■■□□□ 1.21
PDLIM3-212ENST00000620787 DCAF5Q96JK2 942 aa22.63■■□□□ 1.21
PDLIM3-212ENST00000620787 HPSEQ9Y251 543 aa22.63■■□□□ 1.21
PDLIM3-212ENST00000620787 PKD1L3Q7Z443 1732 aa22.63■■□□□ 1.21
PDLIM3-212ENST00000620787 CCDC66A2RUB6 948 aa22.62■■□□□ 1.21
PDLIM3-212ENST00000620787 CPLX1O14810 134 aa22.62■■□□□ 1.21
PDLIM3-212ENST00000620787 ZRANB2O95218 330 aaKnown RBP eCLIP22.62■■□□□ 1.21
PDLIM3-212ENST00000620787 SYKP43405 635 aa22.62■■□□□ 1.21
PDLIM3-212ENST00000620787 GORABQ5T7V8 394 aa22.62■■□□□ 1.21
PDLIM3-212ENST00000620787 REXO1L1PQ8IX06 675 aa22.62■■□□□ 1.21
PDLIM3-212ENST00000620787 CWC25Q9NXE8 425 aaPredicted RBP22.62■■□□□ 1.21
PDLIM3-212ENST00000620787 ALS2Q96Q42 1657 aa22.62■■□□□ 1.21
PDLIM3-212ENST00000620787 CIAO1O76071 339 aa22.62■■□□□ 1.21
PDLIM3-212ENST00000620787 UBASH3AP57075 661 aa22.62■■□□□ 1.21
PDLIM3-212ENST00000620787 NBPF26B4DH59 902 aa22.61■■□□□ 1.21
PDLIM3-212ENST00000620787 CYP27B1O15528 508 aa22.61■■□□□ 1.21
PDLIM3-212ENST00000620787 PLA2G4AP47712 749 aa22.61■■□□□ 1.21
PDLIM3-212ENST00000620787 MYL5Q02045 173 aa22.61■■□□□ 1.21
PDLIM3-212ENST00000620787 FKBP4Q02790 459 aaKnown RBP eCLIP22.61■■□□□ 1.21
PDLIM3-212ENST00000620787 NBPF14Q5TI25 921 aa22.61■■□□□ 1.21
PDLIM3-212ENST00000620787 NBPF10Q6P3W6 841 aaKnown RBP22.61■■□□□ 1.21
PDLIM3-212ENST00000620787 NBPF15Q8N660 670 aa22.61■■□□□ 1.21
PDLIM3-212ENST00000620787 NOL10Q9BSC4 688 aaKnown RBP22.61■■□□□ 1.21
PDLIM3-212ENST00000620787 PUS3Q9BZE2 481 aaKnown RBP22.61■■□□□ 1.21
PDLIM3-212ENST00000620787 CBFA2T2O43439 604 aa22.61■■□□□ 1.21
PDLIM3-212ENST00000620787 KRT28Q7Z3Y7 464 aa22.61■■□□□ 1.21
PDLIM3-212ENST00000620787 ANKLE2Q86XL3 938 aa22.61■■□□□ 1.21
PDLIM3-212ENST00000620787 VSTM4Q8IW00 320 aa22.61■■□□□ 1.21
PDLIM3-212ENST00000620787 NCOA7Q8NI08 942 aa22.61■■□□□ 1.21
PDLIM3-212ENST00000620787 WASHC4Q2M389 1173 aa22.6■■□□□ 1.21
PDLIM3-212ENST00000620787 SHC4Q6S5L8 630 aa22.6■■□□□ 1.21
PDLIM3-212ENST00000620787 RGS22Q8NE09 1264 aa22.6■■□□□ 1.21
PDLIM3-212ENST00000620787 CPDO75976 1380 aa22.6■■□□□ 1.21
PDLIM3-212ENST00000620787 COL18A1P39060 1754 aa22.6■■□□□ 1.21
PDLIM3-212ENST00000620787 TADA3O75528 432 aa22.6■■□□□ 1.21
PDLIM3-212ENST00000620787 TTLL7Q6ZT98 887 aa22.6■■□□□ 1.21
PDLIM3-212ENST00000620787 UBXN4Q92575 508 aa22.6■■□□□ 1.21
PDLIM3-212ENST00000620787 FAM237AA0A1B0GTK4 181 aa22.59■■□□□ 1.21
PDLIM3-212ENST00000620787 SERPINC1P01008 464 aa22.59■■□□□ 1.21
PDLIM3-212ENST00000620787 PNOCQ13519 176 aa22.59■■□□□ 1.21
PDLIM3-212ENST00000620787 LRRFIP1Q32MZ4 808 aaKnown RBP22.59■■□□□ 1.21
PDLIM3-212ENST00000620787 AIFM3Q96NN9 605 aa22.59■■□□□ 1.21
PDLIM3-212ENST00000620787 SRRTQ9BXP5 876 aaKnown RBP22.59■■□□□ 1.21
PDLIM3-212ENST00000620787 WDR19Q8NEZ3 1342 aa22.59■■□□□ 1.21
PDLIM3-212ENST00000620787 MST1RQ04912 1400 aa22.59■■□□□ 1.21
PDLIM3-212ENST00000620787 PPP6R2O75170 966 aa22.58■■□□□ 1.21
PDLIM3-212ENST00000620787 ZFYP08048 801 aaPredicted RBP22.58■■□□□ 1.21
PDLIM3-212ENST00000620787 GOLGA8FQ08AF8 430 aa22.58■■□□□ 1.21
PDLIM3-212ENST00000620787 GOLGA8DPQ0D2H9 430 aa22.58■■□□□ 1.21
PDLIM3-212ENST00000620787 PTPAQ15257 358 aa22.58■■□□□ 1.21
PDLIM3-212ENST00000620787 CFAP100Q494V2 611 aa22.58■■□□□ 1.21
PDLIM3-212ENST00000620787 FCHSD1Q86WN1 690 aa22.58■■□□□ 1.21
PDLIM3-212ENST00000620787 TMEM139Q8IV31 216 aa22.58■■□□□ 1.21
PDLIM3-212ENST00000620787 UTP14AQ9BVJ6 771 aaKnown RBP22.58■■□□□ 1.21
PDLIM3-212ENST00000620787 PARP3Q9Y6F1 533 aa22.58■■□□□ 1.21
PDLIM3-212ENST00000620787 ERICH4A6NGS2 130 aa22.58■■□□□ 1.21
PDLIM3-212ENST00000620787 TMEM232C9JQI7 657 aa22.58■■□□□ 1.21
PDLIM3-212ENST00000620787 RALYLQ86SE5 291 aaKnown RBP22.58■■□□□ 1.21
PDLIM3-212ENST00000620787 ATG3Q9NT62 314 aa22.58■■□□□ 1.21
PDLIM3-212ENST00000620787 ADORA1P30542 326 aa22.57■■□□□ 1.2
PDLIM3-212ENST00000620787 HSP90AB3PQ58FF7 597 aa22.57■■□□□ 1.2
PDLIM3-212ENST00000620787 VPS37DQ86XT2 251 aa22.57■■□□□ 1.2
PDLIM3-212ENST00000620787 MNS1Q8NEH6 495 aa22.57■■□□□ 1.2
PDLIM3-212ENST00000620787 PUS7LQ9H0K6 701 aaKnown RBP22.57■■□□□ 1.2
PDLIM3-212ENST00000620787 ARGLU1Q9NWB6 273 aaPredicted RBP22.57■■□□□ 1.2
PDLIM3-212ENST00000620787 PARP4Q9UKK3 1724 aaKnown RBP22.57■■□□□ 1.2
PDLIM3-212ENST00000620787 URI1O94763 535 aaPredicted RBP22.57■■□□□ 1.2
PDLIM3-212ENST00000620787 CYP2C19P33261 490 aa22.57■■□□□ 1.2
PDLIM3-212ENST00000620787 TTC39AQ5SRH9 613 aa22.57■■□□□ 1.2
PDLIM3-212ENST00000620787 TMCO3Q6UWJ1 677 aa22.57■■□□□ 1.2
PDLIM3-212ENST00000620787 ZMYM6O95789 1325 aa22.56■■□□□ 1.2
PDLIM3-212ENST00000620787 CABP4P57796 275 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms