RNA–Protein interactions for RNA: ENST00000611841.1

EP400-208, Transcript of E1A binding protein p400, human

TSL 5

Gene EP400, Length 3,129 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EP400-208	ENST00000611841	HLF	Q16534	295 aa		13.3	□□□□□ -0.28
EP400-208	ENST00000611841	NFXL1	Q6ZNB6	911 aa		13.3	□□□□□ -0.28
EP400-208	ENST00000611841	KRBA2	Q6ZNG9	492 aa		13.3	□□□□□ -0.28
EP400-208	ENST00000611841	CACTIN	Q8WUQ7	758 aa	Known RBP	13.3	□□□□□ -0.28
EP400-208	ENST00000611841	DHX16	O60231	1041 aa	Known RBP	13.3	□□□□□ -0.28
EP400-208	ENST00000611841	ADD1	P35611	737 aa	Known RBP	13.3	□□□□□ -0.28
EP400-208	ENST00000611841	NCOA7	Q8NI08	942 aa		13.3	□□□□□ -0.28
EP400-208	ENST00000611841	ZNF274	Q96GC6	653 aa	Predicted RBP	13.3	□□□□□ -0.28
EP400-208	ENST00000611841	GREM2	Q9H772	168 aa		13.3	□□□□□ -0.28
EP400-208	ENST00000611841	DENND2A	Q9ULE3	1009 aa		13.3	□□□□□ -0.28
EP400-208	ENST00000611841	MST1R	Q04912	1400 aa		13.3	□□□□□ -0.28
EP400-208	ENST00000611841	MARCKS	P29966	332 aa	Predicted RBP	13.3	□□□□□ -0.28
EP400-208	ENST00000611841	ARID5B	Q14865	1188 aa		13.3	□□□□□ -0.28
EP400-208	ENST00000611841	PTPN14	Q15678	1187 aa		13.3	□□□□□ -0.28
EP400-208	ENST00000611841	PCDHA7	Q9UN72	937 aa		13.3	□□□□□ -0.28
EP400-208	ENST00000611841	SNAP23	O00161	211 aa		13.29	□□□□□ -0.28
EP400-208	ENST00000611841	FDPS	P14324	419 aa	Known RBP	13.29	□□□□□ -0.28
EP400-208	ENST00000611841	ERCC6L	Q2NKX8	1250 aa		13.29	□□□□□ -0.28
EP400-208	ENST00000611841	CCDC82	Q8N4S0	544 aa		13.29	□□□□□ -0.28
EP400-208	ENST00000611841	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.29	□□□□□ -0.28	3e-7	■■■□□ 19.2
EP400-208	ENST00000611841	CLIC4	Q9Y696	253 aa		13.29	□□□□□ -0.28
EP400-208	ENST00000611841	RGPD5	Q99666	1765 aa		13.29	□□□□□ -0.28
EP400-208	ENST00000611841	CIAO1	O76071	339 aa		13.29	□□□□□ -0.28
EP400-208	ENST00000611841	BMS1	Q14692	1282 aa	Known RBP	13.29	□□□□□ -0.28
EP400-208	ENST00000611841	STX1A	Q16623	288 aa		13.29	□□□□□ -0.28
EP400-208	ENST00000611841	PIGB	Q92521	554 aa		13.29	□□□□□ -0.28
EP400-208	ENST00000611841	APPBP2	Q92624	585 aa		13.29	□□□□□ -0.28
EP400-208	ENST00000611841	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.29	□□□□□ -0.28
EP400-208	ENST00000611841	SLAIN2	Q9P270	581 aa		13.29	□□□□□ -0.28
EP400-208	ENST00000611841	LCMT1	Q9UIC8	334 aa		13.29	□□□□□ -0.28
EP400-208	ENST00000611841	TNS3	Q68CZ2	1445 aa		13.29	□□□□□ -0.28
EP400-208	ENST00000611841	CHRM1	P11229	460 aa	Predicted RBP	13.28	□□□□□ -0.28
EP400-208	ENST00000611841	FAM160A1	Q05DH4	1040 aa		13.28	□□□□□ -0.28
EP400-208	ENST00000611841	RRP12	Q5JTH9	1297 aa	Known RBP	13.28	□□□□□ -0.28
EP400-208	ENST00000611841	MICU3	Q86XE3	530 aa		13.28	□□□□□ -0.28
EP400-208	ENST00000611841	AOPEP	Q8N6M6	819 aa		13.28	□□□□□ -0.28
EP400-208	ENST00000611841	AIFM3	Q96NN9	605 aa		13.28	□□□□□ -0.28
EP400-208	ENST00000611841	ISCA1	Q9BUE6	129 aa		13.28	□□□□□ -0.28
EP400-208	ENST00000611841	INCENP	Q9NQS7	918 aa		13.28	□□□□□ -0.28
EP400-208	ENST00000611841	ANKRD18B	A2A2Z9	1011 aa		13.28	□□□□□ -0.28
EP400-208	ENST00000611841	ZFY	P08048	801 aa	Predicted RBP	13.28	□□□□□ -0.28
EP400-208	ENST00000611841	ANO10	Q9NW15	660 aa		13.28	□□□□□ -0.28
EP400-208	ENST00000611841	CARMIL3	Q8ND23	1372 aa		13.28	□□□□□ -0.28
EP400-208	ENST00000611841	IRS4	O14654	1257 aa	Predicted RBP	13.28	□□□□□ -0.28
EP400-208	ENST00000611841	CTAGE5	O15320	804 aa		13.28	□□□□□ -0.28
EP400-208	ENST00000611841	CCDC144B	Q3MJ40	725 aa		13.28	□□□□□ -0.28
EP400-208	ENST00000611841	TDRD7	Q8NHU6	1098 aa	Known RBP	13.28	□□□□□ -0.28
EP400-208	ENST00000611841	MRPS27	Q92552	414 aa	Known RBP	13.28	□□□□□ -0.28
EP400-208	ENST00000611841	ZCCHC17	Q9NP64	241 aa	Known RBP	13.28	□□□□□ -0.28
EP400-208	ENST00000611841	PALLD	Q8WX93	1383 aa		13.28	□□□□□ -0.28
EP400-208	ENST00000611841	JCAD	Q9P266	1359 aa		13.28	□□□□□ -0.28
EP400-208	ENST00000611841	NDUFA8	P51970	172 aa		13.27	□□□□□ -0.28
EP400-208	ENST00000611841	CEP57L1	Q8IYX8	460 aa		13.27	□□□□□ -0.28
EP400-208	ENST00000611841	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.27	□□□□□ -0.28
EP400-208	ENST00000611841	PHKB	Q93100	1093 aa		13.27	□□□□□ -0.28
EP400-208	ENST00000611841	MYL10	Q9BUA6	226 aa		13.27	□□□□□ -0.28
EP400-208	ENST00000611841		B4E1Z4	1266 aa		13.27	□□□□□ -0.29
EP400-208	ENST00000611841	MCAM	P43121	646 aa		13.27	□□□□□ -0.29
EP400-208	ENST00000611841	ST5	P78524	1137 aa		13.27	□□□□□ -0.29
EP400-208	ENST00000611841	CARD10	Q9BWT7	1032 aa		13.27	□□□□□ -0.29
EP400-208	ENST00000611841	EFCC1	Q9HA90	598 aa		13.27	□□□□□ -0.29
EP400-208	ENST00000611841	ATG3	Q9NT62	314 aa		13.27	□□□□□ -0.29
EP400-208	ENST00000611841	SPTLC2	O15270	562 aa		13.26	□□□□□ -0.29
EP400-208	ENST00000611841	SMC2	O95347	1197 aa		13.26	□□□□□ -0.29
EP400-208	ENST00000611841	PCCA	P05165	728 aa	Predicted RBP	13.26	□□□□□ -0.29
EP400-208	ENST00000611841	GPATCH11	Q8N954	259 aa		13.26	□□□□□ -0.29
EP400-208	ENST00000611841	BTG4	Q9NY30	223 aa		13.26	□□□□□ -0.29
EP400-208	ENST00000611841	ATP2B1	P20020	1258 aa		13.26	□□□□□ -0.29
EP400-208	ENST00000611841	SNW1	Q13573	536 aa	Known RBP	13.26	□□□□□ -0.29
EP400-208	ENST00000611841	TEX35	Q5T0J7	233 aa		13.26	□□□□□ -0.29
EP400-208	ENST00000611841	ILDR1	Q86SU0	546 aa	Predicted RBP	13.26	□□□□□ -0.29
EP400-208	ENST00000611841	DHX37	Q8IY37	1157 aa	Known RBP	13.26	□□□□□ -0.29
EP400-208	ENST00000611841	TTLL11	Q8NHH1	800 aa		13.26	□□□□□ -0.29
EP400-208	ENST00000611841	AIDA	Q96BJ3	306 aa		13.26	□□□□□ -0.29
EP400-208	ENST00000611841	ERO1A	Q96HE7	468 aa		13.26	□□□□□ -0.29
EP400-208	ENST00000611841	FAM53C	Q9NYF3	392 aa		13.26	□□□□□ -0.29
EP400-208	ENST00000611841	USP54	Q70EL1	1684 aa		13.26	□□□□□ -0.29
EP400-208	ENST00000611841	RFX7	Q2KHR2	1363 aa		13.26	□□□□□ -0.29
EP400-208	ENST00000611841	MYO1C	O00159	1063 aa		13.26	□□□□□ -0.29
EP400-208	ENST00000611841	SLU7	O95391	586 aa	Known RBP	13.26	□□□□□ -0.29
EP400-208	ENST00000611841	PHKA1	P46020	1223 aa		13.26	□□□□□ -0.29
EP400-208	ENST00000611841	FBXO18	Q8NFZ0	1043 aa		13.26	□□□□□ -0.29
EP400-208	ENST00000611841	NAT10	Q9H0A0	1025 aa	Known RBP	13.26	□□□□□ -0.29
EP400-208	ENST00000611841	MYCN	P04198	464 aa	Predicted RBP	13.25	□□□□□ -0.29
EP400-208	ENST00000611841	PRR29	P0C7W0	189 aa		13.25	□□□□□ -0.29
EP400-208	ENST00000611841	METAP2	P50579	478 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
EP400-208	ENST00000611841	CPLX2	Q6PUV4	134 aa	Known RBP	13.25	□□□□□ -0.29
EP400-208	ENST00000611841	RBM43	Q6ZSC3	357 aa	Known RBP	13.25	□□□□□ -0.29
EP400-208	ENST00000611841	ALG1	Q9BT22	464 aa		13.25	□□□□□ -0.29
EP400-208	ENST00000611841	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.25	□□□□□ -0.29
EP400-208	ENST00000611841	SKIL	P12757	684 aa		13.25	□□□□□ -0.29
EP400-208	ENST00000611841	IQCB1	Q15051	598 aa		13.25	□□□□□ -0.29
EP400-208	ENST00000611841	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.25	□□□□□ -0.29
EP400-208	ENST00000611841	PLA2G4D	Q86XP0	818 aa		13.25	□□□□□ -0.29
EP400-208	ENST00000611841	LRRN4CL	Q8ND94	238 aa		13.25	□□□□□ -0.29
EP400-208	ENST00000611841	AGXT2	Q9BYV1	514 aa		13.25	□□□□□ -0.29
EP400-208	ENST00000611841	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.25	□□□□□ -0.29
EP400-208	ENST00000611841	FHOD1	Q9Y613	1164 aa		13.25	□□□□□ -0.29
EP400-208	ENST00000611841	ZNF532	Q9HCE3	1301 aa		13.25	□□□□□ -0.29
EP400-208	ENST00000611841	SLC3A2	P08195	630 aa	Known RBP	13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 176.3 ms