RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 ADALQ6DHV7 355 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 CCDC191Q8NCU4 936 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 NOC3LQ8WTT2 800 aaKnown RBP7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 CCDC102AQ96A19 550 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 ZFP91Q96JP5 570 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 CLIC6Q96NY7 704 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 LZTFL1Q9NQ48 299 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 MAGEC2Q9UBF1 373 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 KCNJ14Q9UNX9 436 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 KIF5CO60282 957 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 MBD4O95243 580 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 PFKFB1P16118 471 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 FAM193AP78312 1265 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 GOLGA8FQ08AF8 430 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 GOLGA8DPQ0D2H9 430 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 PNOCQ13519 176 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 ERCC6LQ2NKX8 1250 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 CCDC144BQ3MJ40 725 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 DNAJC10Q8IXB1 793 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 TRMT44Q8IYL2 757 aaKnown RBP7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 OSBP2Q969R2 916 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 AIFM3Q96NN9 605 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 MAST3O60307 1309 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 CCDC70Q6NSX1 233 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 NUP88Q99567 741 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 FEZ1Q99689 392 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 RCOR1Q9UKL0 485 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 KCNH3Q9ULD8 1083 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 MAP2P11137 1827 aaKnown RBP7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 ARHGEF28Q8N1W1 1705 aaKnown RBP7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 POLR2DO15514 142 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 CYP7A1P22680 504 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 NLRP5P59047 1200 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 CTDSPL2Q05D32 466 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 ZNF827Q17R98 1081 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 CADPS2Q86UW7 1296 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 IQCA1Q86XH1 822 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 ZNF274Q96GC6 653 aaPredicted RBP7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 ERO1AQ96HE7 468 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 ARMT1Q9H993 441 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 CABP5Q9NP86 173 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 M0R2C6 588 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 N4BP3O15049 544 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 MCM6Q14566 821 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 ZMYM1Q5SVZ6 1142 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 FBXO18Q8NFZ0 1043 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 CTCFLQ8NI51 663 aaPredicted RBP7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 CARD6Q9BX69 1037 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 AP5Z1O43299 807 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 EIF5P55010 431 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 DIS3L2Q8IYB7 885 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 STAMQ92783 540 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 MRFAP1L1Q96HT8 127 aa7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 GTPBP4Q9BZE4 634 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 CLTCQ00610 1675 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-206ENST00000610556 ERBB3P21860 1342 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 PRDM1O75626 825 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 UQCRFS1P1P0C7P4 283 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 IL2RBP14784 551 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 NLRP12P59046 1061 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 COL9A3Q14050 684 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 JAKMIP3Q5VZ66 844 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 STOX1Q6ZVD7 989 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 CATIPQ7Z7H3 387 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 KRI1Q8N9T8 703 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 GOLPH3LQ9H4A5 285 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 RNF41Q9H4P4 317 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 PUF60Q9UHX1 559 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 C3P01024 1663 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 ZNF532Q9HCE3 1301 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 A0A0G2JLW4 131 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 NUTM2BA6NNL0 878 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 USP27XA6NNY8 438 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 NUTM2EB1AL46 878 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 CLSTN1O94985 981 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 NUTM2AQ8IVF1 878 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 TRIM34Q9BYJ4 488 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 ZNHIT6Q9NWK9 470 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 NFE2L3Q9Y4A8 694 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 CDC42BPGQ6DT37 1551 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 CARMIL3Q8ND23 1372 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 G3V3G9 751 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 YEATS4O95619 227 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 AXDND1Q5T1B0 1012 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 DCAF8Q5TAQ9 597 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 AK7Q96M32 723 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 BAG1Q99933 345 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 PUS7LQ9H0K6 701 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 JAG2Q9Y219 1238 aa7.86□□□□□ -1.15
SYNPO2-206ENST00000610556 CEP170BQ9Y4F5 1589 aaPredicted RBP7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 TRIM75PA6NK02 468 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 ERLIN1O75477 346 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 HSPA2P54652 639 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 ADKP55263 362 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 EVCP57679 992 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 KIAA1328Q86T90 577 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 KAZALD1Q96I82 304 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 ACBD3Q9H3P7 528 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 FANCLQ9NW38 375 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms