RNA–Protein interactions for RNA: ENST00000595974.5

TRIM28-206, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-206ENST00000595974 PDS5AQ29RF7 1337 aaKnown RBP20.02■□□□□ 0.79
TRIM28-206ENST00000595974 SALL1Q9NSC2 1324 aa20.02■□□□□ 0.79
TRIM28-206ENST00000595974 CLRN2A0PK11 232 aa20.01■□□□□ 0.79
TRIM28-206ENST00000595974 SURF6O75683 361 aaKnown RBP20.01■□□□□ 0.79
TRIM28-206ENST00000595974 GRM1Q13255 1194 aa20.01■□□□□ 0.79
TRIM28-206ENST00000595974 OS9Q13438 667 aaPredicted RBP20.01■□□□□ 0.79
TRIM28-206ENST00000595974 PDE3AQ14432 1141 aa20.01■□□□□ 0.79
TRIM28-206ENST00000595974 TEKT1Q969V4 418 aa20.01■□□□□ 0.79
TRIM28-206ENST00000595974 XAGE2Q96GT9 111 aa20.01■□□□□ 0.79
TRIM28-206ENST00000595974 MRIQ9BWK5 157 aa20.01■□□□□ 0.79
TRIM28-206ENST00000595974 NOP58Q9Y2X3 529 aaKnown RBP20.01■□□□□ 0.79
TRIM28-206ENST00000595974 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.01■□□□□ 0.79
TRIM28-206ENST00000595974 MYH2Q9UKX2 1941 aa20.01■□□□□ 0.79
TRIM28-206ENST00000595974 MAP2K1Q02750 393 aaPredicted RBP20■□□□□ 0.79
TRIM28-206ENST00000595974 TNFAIP1Q13829 316 aa20■□□□□ 0.79
TRIM28-206ENST00000595974 SPDYE2Q495Y8 402 aa20■□□□□ 0.79
TRIM28-206ENST00000595974 DEFB129Q9H1M3 183 aa20■□□□□ 0.79
TRIM28-206ENST00000595974 VEZTQ9HBM0 779 aa20■□□□□ 0.79
TRIM28-206ENST00000595974 GPR108Q9NPR9 543 aa20■□□□□ 0.79
TRIM28-206ENST00000595974 AOX1Q06278 1338 aa20■□□□□ 0.79
TRIM28-206ENST00000595974 MAP2K2P36507 400 aa19.99■□□□□ 0.79
TRIM28-206ENST00000595974 RASGRF1Q13972 1273 aa19.99■□□□□ 0.79
TRIM28-206ENST00000595974 PRAMEF18Q5VWM3 479 aa19.99■□□□□ 0.79
TRIM28-206ENST00000595974 RGMBQ6NW40 437 aa19.99■□□□□ 0.79
TRIM28-206ENST00000595974 ZGPATQ8N5A5 531 aaKnown RBP19.99■□□□□ 0.79
TRIM28-206ENST00000595974 ZDHHC15Q96MV8 337 aa19.99■□□□□ 0.79
TRIM28-206ENST00000595974 NEUROD6Q96NK8 337 aa19.99■□□□□ 0.79
TRIM28-206ENST00000595974 NOGQ13253 232 aa19.98■□□□□ 0.79
TRIM28-206ENST00000595974 GORABQ5T7V8 394 aa19.98■□□□□ 0.79
TRIM28-206ENST00000595974 HHIPL2Q6UWX4 724 aa19.98■□□□□ 0.79
TRIM28-206ENST00000595974 TDRD3Q9H7E2 651 aaKnown RBP19.98■□□□□ 0.79
TRIM28-206ENST00000595974 ZBTB40Q9NUA8 1239 aa19.98■□□□□ 0.79
TRIM28-206ENST00000595974 WBP1LQ9NX94 342 aa19.98■□□□□ 0.79
TRIM28-206ENST00000595974 ZNF70Q9UC06 446 aaPredicted RBP19.98■□□□□ 0.79
TRIM28-206ENST00000595974 LDHBP07195 334 aaKnown RBP19.97■□□□□ 0.79
TRIM28-206ENST00000595974 PRDX5P30044 214 aa19.97■□□□□ 0.79
TRIM28-206ENST00000595974 TNNI3KQ59H18 835 aa19.97■□□□□ 0.79
TRIM28-206ENST00000595974 CCDC102AQ96A19 550 aa19.97■□□□□ 0.79
TRIM28-206ENST00000595974 AIDAQ96BJ3 306 aa19.97■□□□□ 0.79
TRIM28-206ENST00000595974 FPGT-TNNI3KV9GXZ4 949 aa19.97■□□□□ 0.79
TRIM28-206ENST00000595974 AKAP11Q9UKA4 1901 aa19.97■□□□□ 0.79
TRIM28-206ENST00000595974 SSC5DA1L4H1 1573 aa19.96■□□□□ 0.79
TRIM28-206ENST00000595974 AOC2O75106 756 aa19.96■□□□□ 0.79
TRIM28-206ENST00000595974 ARID4AP29374 1257 aaPredicted RBP19.96■□□□□ 0.79
TRIM28-206ENST00000595974 ZNF157P51786 506 aaPredicted RBP19.96■□□□□ 0.79
TRIM28-206ENST00000595974 TTLL12Q14166 644 aaPredicted RBP19.96■□□□□ 0.79
TRIM28-206ENST00000595974 RPAP2Q8IXW5 612 aaPredicted RBP19.96■□□□□ 0.79
TRIM28-206ENST00000595974 FAM155AB1AL88 458 aaPredicted RBP19.95■□□□□ 0.78
TRIM28-206ENST00000595974 HMMRO75330 724 aa19.95■□□□□ 0.78
TRIM28-206ENST00000595974 SLC10A3P09131 477 aa19.95■□□□□ 0.78
TRIM28-206ENST00000595974 RASA3Q14644 834 aa19.95■□□□□ 0.78
TRIM28-206ENST00000595974 C20orf194Q5TEA3 1177 aa19.95■□□□□ 0.78
TRIM28-206ENST00000595974 ARMC9Q7Z3E5 817 aa19.95■□□□□ 0.78
TRIM28-206ENST00000595974 ERC1Q8IUD2 1116 aa19.95■□□□□ 0.78
TRIM28-206ENST00000595974 YTHDC1Q96MU7 727 aaKnown RBP19.95■□□□□ 0.78
TRIM28-206ENST00000595974 TMOD2Q9NZR1 351 aa19.95■□□□□ 0.78
TRIM28-206ENST00000595974 OTOFQ9HC10 1997 aa19.94■□□□□ 0.78
TRIM28-206ENST00000595974 MAST2Q6P0Q8 1798 aa19.94■□□□□ 0.78
TRIM28-206ENST00000595974 UQCRFS1P1P0C7P4 283 aa19.94■□□□□ 0.78
TRIM28-206ENST00000595974 TNNI2P48788 182 aa19.94■□□□□ 0.78
TRIM28-206ENST00000595974 SUPT20HL1Q3ZLR7 823 aa19.94■□□□□ 0.78
TRIM28-206ENST00000595974 HSP90AB4PQ58FF6 505 aa19.94■□□□□ 0.78
TRIM28-206ENST00000595974 APOBEC3HQ6NTF7 200 aaKnown RBP19.94■□□□□ 0.78
TRIM28-206ENST00000595974 MOB2Q70IA6 237 aa19.94■□□□□ 0.78
TRIM28-206ENST00000595974 FOXN1O15353 648 aa19.93■□□□□ 0.78
TRIM28-206ENST00000595974 DIXDC1Q155Q3 683 aa19.93■□□□□ 0.78
TRIM28-206ENST00000595974 FKBP1CQ5VVH2 108 aa19.93■□□□□ 0.78
TRIM28-206ENST00000595974 SPTY2D1Q68D10 685 aaPredicted RBP19.93■□□□□ 0.78
TRIM28-206ENST00000595974 RASAL3Q86YV0 1011 aa19.93■□□□□ 0.78
TRIM28-206ENST00000595974 BEGAINQ9BUH8 593 aa19.93■□□□□ 0.78
TRIM28-206ENST00000595974 EXOC6BQ9Y2D4 811 aa19.93■□□□□ 0.78
TRIM28-206ENST00000595974 DAGLAQ9Y4D2 1042 aa19.93■□□□□ 0.78
TRIM28-206ENST00000595974 AK9Q5TCS8 1911 aa19.92■□□□□ 0.78
TRIM28-206ENST00000595974 TCP10L2B9ZVM9 353 aa19.92■□□□□ 0.78
TRIM28-206ENST00000595974 UBE2Q2LH0YL09 131 aa19.92■□□□□ 0.78
TRIM28-206ENST00000595974 PPP1R12BO60237 982 aaPredicted RBP19.92■□□□□ 0.78
TRIM28-206ENST00000595974 MAP3K11Q16584 847 aa19.92■□□□□ 0.78
TRIM28-206ENST00000595974 DZIP1Q86YF9 867 aaKnown RBP19.92■□□□□ 0.78
TRIM28-206ENST00000595974 SPATA5Q8NB90 893 aa19.92■□□□□ 0.78
TRIM28-206ENST00000595974 DBNDD2Q9BQY9 259 aa19.92■□□□□ 0.78
TRIM28-206ENST00000595974 HMG20BQ9P0W2 317 aa19.92■□□□□ 0.78
TRIM28-206ENST00000595974 ABCF2Q9UG63 623 aa19.92■□□□□ 0.78
TRIM28-206ENST00000595974 LAMB1P07942 1786 aa19.92■□□□□ 0.78
TRIM28-206ENST00000595974 CTCFP49711 727 aaPredicted RBP19.91■□□□□ 0.78
TRIM28-206ENST00000595974 CCDC158Q5M9N0 1113 aa19.91■□□□□ 0.78
TRIM28-206ENST00000595974 NBPF12Q5TAG4 269 aaPredicted RBP19.91■□□□□ 0.78
TRIM28-206ENST00000595974 SLF2Q8IX21 1173 aa19.91■□□□□ 0.78
TRIM28-206ENST00000595974 ANGEL1Q9UNK9 670 aaKnown RBP19.91■□□□□ 0.78
TRIM28-206ENST00000595974 RPAP1Q9BWH6 1393 aaPredicted RBP19.91■□□□□ 0.78
TRIM28-206ENST00000595974 MYO5AQ9Y4I1 1855 aaKnown RBP19.9■□□□□ 0.78
TRIM28-206ENST00000595974 MCAMP43121 646 aa19.9■□□□□ 0.78
TRIM28-206ENST00000595974 PRKG1Q13976 671 aa19.9■□□□□ 0.78
TRIM28-206ENST00000595974 TTC39AQ5SRH9 613 aa19.9■□□□□ 0.78
TRIM28-206ENST00000595974 LDLRAD1Q5T700 205 aa19.9■□□□□ 0.78
TRIM28-206ENST00000595974 FAM83AQ86UY5 434 aa19.9■□□□□ 0.78
TRIM28-206ENST00000595974 SIRT2Q8IXJ6 389 aa19.9■□□□□ 0.78
TRIM28-206ENST00000595974 ZNF512BQ96KM6 892 aaPredicted RBP19.9■□□□□ 0.78
TRIM28-206ENST00000595974 DBNLQ9UJU6 430 aaKnown RBP19.9■□□□□ 0.78
TRIM28-206ENST00000595974 GAKO14976 1311 aa19.9■□□□□ 0.78
TRIM28-206ENST00000595974 UNCXA6NJT0 531 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms